RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 SWAP70Q9UH65 585 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 SERPINB13Q9UIV8 391 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.38□□□□□ -1.07
PSMB3-212ENST00000620309 SNX14Q9Y5W7 946 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 TACC3Q9Y6A5 838 aa8.38□□□□□ -1.07
PSMB3-212ENST00000620309 MUC3AQ02505 3323 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 MGAMO43451 1857 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 DDTLA6NHG4 134 aaPredicted RBP8.37□□□□□ -1.07
PSMB3-212ENST00000620309 SPDYE5A6NIY4 337 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 USP17L12C9JPN9 530 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 USP17L21D6R901 530 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 H0YGN5 161 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 APPP05067 770 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 ASNSP08243 561 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 FGRP09769 529 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 CETPP11597 493 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 MCCP23508 829 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 HAND2P61296 217 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 CAP1Q01518 475 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 PPATQ06203 517 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 MKRN3Q13064 507 aaKnown RBP8.37□□□□□ -1.07
PSMB3-212ENST00000620309 PPIL2Q13356 520 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 SNAPC2Q13487 334 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 COL9A3Q14050 684 aaPredicted RBP8.37□□□□□ -1.07
PSMB3-212ENST00000620309 IMMTQ16891 758 aaKnown RBP8.37□□□□□ -1.07
PSMB3-212ENST00000620309 TSGA10IPQ3SY00 556 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 C12orf60Q5U649 245 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 METTL16Q86W50 562 aaKnown RBP8.37□□□□□ -1.07
PSMB3-212ENST00000620309 ZFPM1Q8IX07 1006 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 CABP5Q9NP86 173 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 SAP30BPQ9UHR5 308 aaKnown RBP8.37□□□□□ -1.07
PSMB3-212ENST00000620309 CTNNA3Q9UI47 895 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 PTPN22Q9Y2R2 807 aa8.37□□□□□ -1.07
PSMB3-212ENST00000620309 ORC4O43929 436 aa8.36□□□□□ -1.07
PSMB3-212ENST00000620309 PCP11498 1178 aaKnown RBP8.36□□□□□ -1.07
PSMB3-212ENST00000620309 PLCD1P51178 756 aa8.36□□□□□ -1.07
PSMB3-212ENST00000620309 PABPC4Q13310 644 aaKnown RBP eCLIP8.36□□□□□ -1.073e-15■■■□□ 14.7
PSMB3-212ENST00000620309 SLC4A8Q2Y0W8 1093 aa8.36□□□□□ -1.07
PSMB3-212ENST00000620309 ADCK5Q3MIX3 580 aa8.36□□□□□ -1.07
PSMB3-212ENST00000620309 RNF20Q5VTR2 975 aa8.36□□□□□ -1.07
PSMB3-212ENST00000620309 C16orf86Q6ZW13 317 aa8.36□□□□□ -1.07
PSMB3-212ENST00000620309 MB21D2Q8IYB1 491 aaPredicted RBP8.36□□□□□ -1.07
PSMB3-212ENST00000620309 NKX2-3Q8TAU0 364 aa8.36□□□□□ -1.07
PSMB3-212ENST00000620309 ZNF333Q96JL9 665 aa8.36□□□□□ -1.07
PSMB3-212ENST00000620309 CLMNQ96JQ2 1002 aa8.36□□□□□ -1.07
PSMB3-212ENST00000620309 ZCCHC17Q9NP64 241 aaKnown RBP8.36□□□□□ -1.07
PSMB3-212ENST00000620309 RBM27Q9P2N5 1060 aaKnown RBP8.36□□□□□ -1.07
PSMB3-212ENST00000620309 ZNF112Q9UJU3 913 aa8.36□□□□□ -1.07
PSMB3-212ENST00000620309 FZD1Q9UP38 647 aa8.36□□□□□ -1.07
PSMB3-212ENST00000620309 RLFQ13129 1914 aa8.36□□□□□ -1.07
PSMB3-212ENST00000620309 CCL15-CCL14A0A0B4J2E2 113 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 E7EWF7 191 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 ZNF213O14771 459 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 ZKSCAN1P17029 563 aaPredicted RBP8.35□□□□□ -1.07
PSMB3-212ENST00000620309 INPP5BP32019 993 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 SHMT1P34896 483 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 CAP2P40123 477 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 CTDSPL2Q05D32 466 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 KRT32Q14532 448 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 CCL15Q16663 113 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 AKNAD1Q5T1N1 836 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 CHRDL2Q6WN34 429 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.35□□□□□ -1.07
PSMB3-212ENST00000620309 FASTKD5Q7L8L6 764 aaKnown RBP8.35□□□□□ -1.07
PSMB3-212ENST00000620309 SLC44A5Q8NCS7 719 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 ZKSCAN4Q969J2 545 aaPredicted RBP8.35□□□□□ -1.07
PSMB3-212ENST00000620309 FEZ1Q99689 392 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 SH2D4AQ9H788 454 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 TMOD4Q9NZQ9 345 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 PNMA3Q9UL41 463 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 TRIM17Q9Y577 477 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 SNCAIPQ9Y6H5 919 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 COL11A1P12107 1806 aaPredicted RBP8.35□□□□□ -1.07
PSMB3-212ENST00000620309 MYH15Q9Y2K3 1946 aa8.35□□□□□ -1.07
PSMB3-212ENST00000620309 WDR19Q8NEZ3 1342 aa8.34□□□□□ -1.07
PSMB3-212ENST00000620309 USP17L5A8MUK1 530 aa8.34□□□□□ -1.07
PSMB3-212ENST00000620309 MINDY4BA8MYZ0 360 aa8.34□□□□□ -1.07
PSMB3-212ENST00000620309 MPHOSPH10O00566 681 aaKnown RBP8.34□□□□□ -1.07
PSMB3-212ENST00000620309 SLURP2P0DP57 97 aa8.34□□□□□ -1.07
PSMB3-212ENST00000620309 RASA1P20936 1047 aa8.34□□□□□ -1.07
PSMB3-212ENST00000620309 NT5C2P49902 561 aa8.34□□□□□ -1.07
PSMB3-212ENST00000620309 ANTXR2P58335 489 aa8.34□□□□□ -1.07
PSMB3-212ENST00000620309 MAP3K10Q02779 954 aa8.34□□□□□ -1.07
PSMB3-212ENST00000620309 PDE4BQ07343 736 aa8.34□□□□□ -1.07
PSMB3-212ENST00000620309 ARHGEF6Q15052 776 aa8.34□□□□□ -1.07
PSMB3-212ENST00000620309 CERKLQ49MI3 558 aaPredicted RBP8.34□□□□□ -1.07
PSMB3-212ENST00000620309 PPP4R3BQ5MIZ7 849 aa8.34□□□□□ -1.07
PSMB3-212ENST00000620309 DYNLL2Q96FJ2 89 aa8.34□□□□□ -1.07
PSMB3-212ENST00000620309 TM6SF1Q9BZW5 370 aa8.34□□□□□ -1.07
PSMB3-212ENST00000620309 RNF41Q9H4P4 317 aaPredicted RBP8.34□□□□□ -1.07
PSMB3-212ENST00000620309 TSHZ2Q9NRE2 1034 aa8.34□□□□□ -1.07
PSMB3-212ENST00000620309 EYSQ5T1H1 3165 aa8.34□□□□□ -1.07
PSMB3-212ENST00000620309 FAM196BA6NMK8 535 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 CXCL11O14625 94 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 PRDM1O75626 825 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 PTPRAP18433 802 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 CASTP20810 708 aaKnown RBP8.33□□□□□ -1.08
PSMB3-212ENST00000620309 CDK8P49336 464 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 USP14P54578 494 aa8.33□□□□□ -1.08
PSMB3-212ENST00000620309 KIF22Q14807 665 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms