RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 PAGE5Q96GU1 130 aa18.23■□□□□ 0.51
DKC1-213ENST00000620277 BTG4Q9NY30 223 aa18.23■□□□□ 0.51
DKC1-213ENST00000620277 PDE8AO60658 829 aa18.22■□□□□ 0.51
DKC1-213ENST00000620277 SRGAP2O75044 1071 aa18.22■□□□□ 0.51
DKC1-213ENST00000620277 FAM193AP78312 1265 aa18.22■□□□□ 0.51
DKC1-213ENST00000620277 LONRF2Q1L5Z9 754 aa18.22■□□□□ 0.51
DKC1-213ENST00000620277 UIMC1Q96RL1 719 aa18.22■□□□□ 0.51
DKC1-213ENST00000620277 PNKPQ96T60 521 aa18.22■□□□□ 0.51
DKC1-213ENST00000620277 HDAC6Q9UBN7 1215 aa18.22■□□□□ 0.51
DKC1-213ENST00000620277 GDAQ9Y2T3 454 aa18.22■□□□□ 0.51
DKC1-213ENST00000620277 ABCC6O95255 1503 aa18.22■□□□□ 0.51
DKC1-213ENST00000620277 PP2D1A8MPX8 630 aa18.22■□□□□ 0.51
DKC1-213ENST00000620277 KIF5CO60282 957 aa18.22■□□□□ 0.51
DKC1-213ENST00000620277 DEXIO95424 95 aa18.22■□□□□ 0.51
DKC1-213ENST00000620277 FBXL16Q8N461 479 aa18.22■□□□□ 0.51
DKC1-213ENST00000620277 IFIT1BQ5T764 474 aaKnown RBP18.21■□□□□ 0.51
DKC1-213ENST00000620277 ENOX1Q8TC92 643 aaKnown RBP18.21■□□□□ 0.51
DKC1-213ENST00000620277 GOLGA1Q92805 767 aa18.21■□□□□ 0.51
DKC1-213ENST00000620277 KIFC2Q96AC6 838 aa18.21■□□□□ 0.51
DKC1-213ENST00000620277 KRT23Q9C075 422 aa18.21■□□□□ 0.51
DKC1-213ENST00000620277 SCN11AQ9UI33 1791 aa18.21■□□□□ 0.51
DKC1-213ENST00000620277 ZNF18P17022 549 aa18.21■□□□□ 0.51
DKC1-213ENST00000620277 CUL4BQ13620 913 aa18.21■□□□□ 0.51
DKC1-213ENST00000620277 NR1I3Q14994 352 aa18.21■□□□□ 0.51
DKC1-213ENST00000620277 CADPS2Q86UW7 1296 aa18.21■□□□□ 0.51
DKC1-213ENST00000620277 SGMS1Q86VZ5 419 aa18.21■□□□□ 0.51
DKC1-213ENST00000620277 GPKOWQ92917 476 aaPredicted RBP eCLIP18.21■□□□□ 0.513e-16■□□□□ 9.7
DKC1-213ENST00000620277 CHP1Q99653 195 aa18.21■□□□□ 0.51
DKC1-213ENST00000620277 ADGRG1Q9Y653 693 aa18.21■□□□□ 0.51
DKC1-213ENST00000620277 CYP2C19P33261 490 aa18.21■□□□□ 0.51
DKC1-213ENST00000620277 PLCD1P51178 756 aa18.21■□□□□ 0.51
DKC1-213ENST00000620277 TBX2Q13207 712 aaPredicted RBP18.21■□□□□ 0.51
DKC1-213ENST00000620277 KCTD19Q17RG1 926 aaPredicted RBP18.21■□□□□ 0.51
DKC1-213ENST00000620277 BRINP3Q76B58 766 aa18.21■□□□□ 0.51
DKC1-213ENST00000620277 WASF1Q92558 559 aa18.21■□□□□ 0.51
DKC1-213ENST00000620277 CPVLQ9H3G5 476 aa18.21■□□□□ 0.51
DKC1-213ENST00000620277 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.2■□□□□ 0.5
DKC1-213ENST00000620277 SRPRBQ9Y5M8 271 aaKnown RBP18.2■□□□□ 0.5
DKC1-213ENST00000620277 UQCRFS1P1P0C7P4 283 aa18.2■□□□□ 0.5
DKC1-213ENST00000620277 LIFRP42702 1097 aa18.2■□□□□ 0.5
DKC1-213ENST00000620277 NLRP5P59047 1200 aa18.2■□□□□ 0.5
DKC1-213ENST00000620277 SIPA1L3O60292 1781 aaPredicted RBP18.2■□□□□ 0.5
DKC1-213ENST00000620277 CYP2D6P10635 497 aa18.19■□□□□ 0.5
DKC1-213ENST00000620277 JAKMIP3Q5VZ66 844 aa18.19■□□□□ 0.5
DKC1-213ENST00000620277 ENAHQ8N8S7 591 aaPredicted RBP18.19■□□□□ 0.5
DKC1-213ENST00000620277 DRC1Q96MC2 740 aa18.19■□□□□ 0.5
DKC1-213ENST00000620277 FAM53CQ9NYF3 392 aa18.19■□□□□ 0.5
DKC1-213ENST00000620277 DACH1Q9UI36 760 aa18.19■□□□□ 0.5
DKC1-213ENST00000620277 C10orf67Q8IYJ2 551 aa18.19■□□□□ 0.5
DKC1-213ENST00000620277 PCMTD1Q96MG8 357 aaPredicted RBP18.19■□□□□ 0.5
DKC1-213ENST00000620277 PSMB7Q99436 277 aa18.19■□□□□ 0.5
DKC1-213ENST00000620277 ABCB6Q9NP58 842 aa18.19■□□□□ 0.5
DKC1-213ENST00000620277 TFCP2L1Q9NZI6 479 aa18.19■□□□□ 0.5
DKC1-213ENST00000620277 FAM170AA1A519 330 aa18.19■□□□□ 0.5
DKC1-213ENST00000620277 USP17L12C9JPN9 530 aa18.19■□□□□ 0.5
DKC1-213ENST00000620277 USP17L21D6R901 530 aa18.19■□□□□ 0.5
DKC1-213ENST00000620277 FILIP1LQ4L180 1135 aa18.19■□□□□ 0.5
DKC1-213ENST00000620277 SLC51AQ86UW1 340 aa18.19■□□□□ 0.5
DKC1-213ENST00000620277 GSPT2Q8IYD1 628 aaKnown RBP18.19■□□□□ 0.5
DKC1-213ENST00000620277 GPR161Q8N6U8 529 aaKnown RBP18.19■□□□□ 0.5
DKC1-213ENST00000620277 NOA1Q8NC60 698 aaKnown RBP18.19■□□□□ 0.5
DKC1-213ENST00000620277 KCND1Q9NSA2 647 aa18.19■□□□□ 0.5
DKC1-213ENST00000620277 NIP7Q9Y221 180 aaKnown RBP eCLIP18.19■□□□□ 0.5
DKC1-213ENST00000620277 GYPCP04921 128 aa18.18■□□□□ 0.5
DKC1-213ENST00000620277 KRT9P35527 623 aa18.18■□□□□ 0.5
DKC1-213ENST00000620277 KRT2P35908 639 aa18.18■□□□□ 0.5
DKC1-213ENST00000620277 TNNT3P45378 269 aaPredicted RBP18.18■□□□□ 0.5
DKC1-213ENST00000620277 FUT8Q9BYC5 575 aa18.18■□□□□ 0.5
DKC1-213ENST00000620277 MYH15Q9Y2K3 1946 aa18.18■□□□□ 0.5
DKC1-213ENST00000620277 MAGEB6P1A0A0J9YX57 407 aa18.18■□□□□ 0.5
DKC1-213ENST00000620277 TRIM66O15016 1216 aa18.18■□□□□ 0.5
DKC1-213ENST00000620277 GTF2E1P29083 439 aaPredicted RBP18.18■□□□□ 0.5
DKC1-213ENST00000620277 UBXN1Q04323 297 aa18.18■□□□□ 0.5
DKC1-213ENST00000620277 CNNM2Q9H8M5 875 aa18.18■□□□□ 0.5
DKC1-213ENST00000620277 AATFQ9NY61 560 aaKnown RBP eCLIP18.18■□□□□ 0.55e-19■■□□□ 12.5
DKC1-213ENST00000620277 CYP19A1P11511 503 aaPredicted RBP18.17■□□□□ 0.5
DKC1-213ENST00000620277 DNA2P51530 1060 aa18.17■□□□□ 0.5
DKC1-213ENST00000620277 CHRNDQ07001 517 aa18.17■□□□□ 0.5
DKC1-213ENST00000620277 SRRTQ9BXP5 876 aaKnown RBP18.17■□□□□ 0.5
DKC1-213ENST00000620277 FOXP1Q9H334 677 aaPredicted RBP18.17■□□□□ 0.5
DKC1-213ENST00000620277 LCMT1Q9UIC8 334 aa18.17■□□□□ 0.5
DKC1-213ENST00000620277 ADAM21Q9UKJ8 722 aa18.17■□□□□ 0.5
DKC1-213ENST00000620277 IGHMBP2P38935 993 aaKnown RBP18.17■□□□□ 0.5
DKC1-213ENST00000620277 SARSP49591 514 aaKnown RBP18.17■□□□□ 0.5
DKC1-213ENST00000620277 ERVK-24P63145 666 aa18.17■□□□□ 0.5
DKC1-213ENST00000620277 KRT31Q15323 416 aa18.17■□□□□ 0.5
DKC1-213ENST00000620277 SPATA1Q5VX52 437 aa18.17■□□□□ 0.5
DKC1-213ENST00000620277 TXLNAP40222 546 aa18.17■□□□□ 0.5
DKC1-213ENST00000620277 VSNL1P62760 191 aa18.17■□□□□ 0.5
DKC1-213ENST00000620277 TTC38Q5R3I4 469 aa18.17■□□□□ 0.5
DKC1-213ENST00000620277 RASGRP2Q7LDG7 609 aa18.17■□□□□ 0.5
DKC1-213ENST00000620277 CATIPQ7Z7H3 387 aa18.17■□□□□ 0.5
DKC1-213ENST00000620277 ESR2Q92731 530 aa18.17■□□□□ 0.5
DKC1-213ENST00000620277 ARID4AP29374 1257 aaPredicted RBP18.16■□□□□ 0.5
DKC1-213ENST00000620277 PKN1Q16512 942 aa18.16■□□□□ 0.5
DKC1-213ENST00000620277 RIN2Q8WYP3 895 aaPredicted RBP18.16■□□□□ 0.5
DKC1-213ENST00000620277 CALCOCO1Q9P1Z2 691 aa18.16■□□□□ 0.5
DKC1-213ENST00000620277 A0A1B0GTH6 734 aa18.16■□□□□ 0.5
DKC1-213ENST00000620277 CCDC196A0A1B0GTZ2 297 aa18.16■□□□□ 0.5
DKC1-213ENST00000620277 XBP1P17861 261 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms