RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 PLCG2P16885 1265 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 DNAJB2P25686 324 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 PRDX5P30044 214 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 USP17L24Q0WX57 530 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 PSRC1Q6PGN9 363 aaPredicted RBP5.71□□□□□ -1.5
SNCA-213ENST00000618500 FOXP4Q8IVH2 680 aaPredicted RBP5.71□□□□□ -1.5
SNCA-213ENST00000618500 MB21D1Q8N884 522 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 HERVK_113Q902F9 699 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 RNPC3Q96LT9 517 aaKnown RBP5.71□□□□□ -1.5
SNCA-213ENST00000618500 TXNRD2Q9NNW7 524 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 SLC5A4Q9NY91 659 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 HDAC5Q9UQL6 1122 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 PLIN1O60240 522 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 FRAT2O75474 233 aaPredicted RBP5.71□□□□□ -1.5
SNCA-213ENST00000618500 BMP1P13497 986 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 CYP2B6P20813 491 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 BTDP43251 543 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 HMGCS2P54868 508 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 TCP10Q12799 353 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 POTEEQ6S8J3 1075 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 IFNLR1Q8IU57 520 aaPredicted RBP5.71□□□□□ -1.5
SNCA-213ENST00000618500 P2RX7Q99572 595 aaKnown RBP5.71□□□□□ -1.5
SNCA-213ENST00000618500 SENP6Q9GZR1 1112 aaPredicted RBP5.71□□□□□ -1.5
SNCA-213ENST00000618500 KIAA1683Q9H0B3 1180 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 ZNF576Q9H609 170 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 FLRT1Q9NZU1 646 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 PI4KBQ9UBF8 816 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 RALGAPA2Q2PPJ7 1873 aa5.71□□□□□ -1.5
SNCA-213ENST00000618500 KMT2EQ8IZD2 1858 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 MOXD2PA6NHM9 499 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 USP17L10C9JJH3 530 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 PI4K2BG5E9Z4 385 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 ELL2O00472 640 aaPredicted RBP5.7□□□□□ -1.5
SNCA-213ENST00000618500 TIMP1P01033 207 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 ARID4AP29374 1257 aaPredicted RBP5.7□□□□□ -1.5
SNCA-213ENST00000618500 SPP2Q13103 211 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 GRIN2CQ14957 1233 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 DIXDC1Q155Q3 683 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 TRIM60Q495X7 471 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 TATDN1Q6P1N9 297 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 CATSPERGQ6ZRH7 1159 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 UPF3AQ9H1J1 476 aaKnown RBP5.7□□□□□ -1.5
SNCA-213ENST00000618500 TBX21Q9UL17 535 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 MKI67P46013 3256 aaKnown RBP5.7□□□□□ -1.5
SNCA-213ENST00000618500 IL15P40933 162 aaPredicted RBP5.7□□□□□ -1.5
SNCA-213ENST00000618500 LRRC41Q15345 812 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 CCL14Q16627 93 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 ATP2B3Q16720 1220 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 TSR2Q969E8 191 aaKnown RBP5.7□□□□□ -1.5
SNCA-213ENST00000618500 ZNF512BQ96KM6 892 aaPredicted RBP5.7□□□□□ -1.5
SNCA-213ENST00000618500 MROH8Q9H579 483 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 PTPRSQ13332 1948 aa5.7□□□□□ -1.5
SNCA-213ENST00000618500 ELP1O95163 1332 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 MTMR2Q13614 643 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 RRP1BQ14684 758 aaKnown RBP5.69□□□□□ -1.5
SNCA-213ENST00000618500 MFSD5Q6N075 450 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 DZIP1Q86YF9 867 aaKnown RBP5.69□□□□□ -1.5
SNCA-213ENST00000618500 COPRSQ9NQ92 184 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 EMILIN3Q9NT22 766 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 LMCD1Q9NZU5 365 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 ZBTB21Q9ULJ3 1066 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 SPTBN5Q9NRC6 3674 aaKnown RBP5.69□□□□□ -1.5
SNCA-213ENST00000618500 CDK7P50613 346 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 ATP2B2Q01814 1243 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 CNGB1Q14028 1251 aaPredicted RBP5.69□□□□□ -1.5
SNCA-213ENST00000618500 MVPQ14764 893 aaKnown RBP5.69□□□□□ -1.5
SNCA-213ENST00000618500 ZNF467Q7Z7K2 595 aaPredicted RBP5.69□□□□□ -1.5
SNCA-213ENST00000618500 KLHDC9Q8NEP7 349 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 LRFN3Q9BTN0 628 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 PORCNQ9H237 461 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 PRKRIP1Q9H875 184 aaPredicted RBP5.69□□□□□ -1.5
SNCA-213ENST00000618500 MYO5AQ9Y4I1 1855 aaKnown RBP5.69□□□□□ -1.5
SNCA-213ENST00000618500 PRR33A8MZF0 331 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 PFKMP08237 780 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 TMEM31Q5JXX7 168 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 CCSAPQ6IQ19 270 aaPredicted RBP5.69□□□□□ -1.5
SNCA-213ENST00000618500 SLC43A3Q8NBI5 491 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 NPLOC4Q8TAT6 608 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 NSUN4Q96CB9 384 aaKnown RBP5.69□□□□□ -1.5
SNCA-213ENST00000618500 SNX27Q96L92 541 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 ATP11BQ9Y2G3 1177 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 PCDHA11Q9Y5I1 949 aa5.69□□□□□ -1.5
SNCA-213ENST00000618500 POTEMA6NI47 508 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 TLL1O43897 1013 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 NBPF7P0C2Y1 421 aaPredicted RBP5.68□□□□□ -1.5
SNCA-213ENST00000618500 ZEB1P37275 1124 aaPredicted RBP5.68□□□□□ -1.5
SNCA-213ENST00000618500 EPHB4P54760 987 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 MECOMQ03112 1051 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 MTX1Q13505 466 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 Q3C1V9 767 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 ATF7IPQ6VMQ6 1270 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 ERICH6Q7L0X2 663 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 ZNF384Q8TF68 577 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 MTIF3Q9H2K0 278 aaKnown RBP5.68□□□□□ -1.5
SNCA-213ENST00000618500 AKAP2Q9Y2D5 859 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 TNKSO95271 1327 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 A0A1W2PQ45 241 aaPredicted RBP5.68□□□□□ -1.5
SNCA-213ENST00000618500 A0A1W2PQY0 241 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 ADAMTS4O75173 837 aa5.68□□□□□ -1.5
SNCA-213ENST00000618500 SLC25A27O95847 323 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms