RNA–Protein interactions for RNA: ENST00000618159.1

PSMB3-210, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-210ENST00000618159 SYNGAP1Q96PV0 1343 aa11.33□□□□□ -0.6
PSMB3-210ENST00000618159 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.32□□□□□ -0.6
PSMB3-210ENST00000618159 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.32□□□□□ -0.6
PSMB3-210ENST00000618159 GLRX3O76003 335 aaKnown RBP11.32□□□□□ -0.6
PSMB3-210ENST00000618159 CIAO1O76071 339 aa11.32□□□□□ -0.6
PSMB3-210ENST00000618159 ADCYAP1R1P41586 468 aa11.32□□□□□ -0.6
PSMB3-210ENST00000618159 MRPS5P82675 430 aaKnown RBP11.32□□□□□ -0.6
PSMB3-210ENST00000618159 TLE2Q04725 743 aa11.32□□□□□ -0.6
PSMB3-210ENST00000618159 AKNAD1Q5T1N1 836 aa11.32□□□□□ -0.6
PSMB3-210ENST00000618159 SPTY2D1Q68D10 685 aaPredicted RBP11.32□□□□□ -0.6
PSMB3-210ENST00000618159 ERICH6Q7L0X2 663 aa11.32□□□□□ -0.6
PSMB3-210ENST00000618159 TIFAQ96CG3 184 aa11.32□□□□□ -0.6
PSMB3-210ENST00000618159 PI4KBQ9UBF8 816 aa11.32□□□□□ -0.6
PSMB3-210ENST00000618159 MUC6Q6W4X9 2439 aa11.32□□□□□ -0.6
PSMB3-210ENST00000618159 MAP4K4O95819 1239 aaPredicted RBP11.31□□□□□ -0.6
PSMB3-210ENST00000618159 CCNA1P78396 465 aa11.31□□□□□ -0.6
PSMB3-210ENST00000618159 LRRC41Q15345 812 aa11.31□□□□□ -0.6
PSMB3-210ENST00000618159 WDR78Q5VTH9 848 aa11.31□□□□□ -0.6
PSMB3-210ENST00000618159 FERMT2Q96AC1 680 aa11.31□□□□□ -0.6
PSMB3-210ENST00000618159 NECAB3Q96P71 396 aaPredicted RBP11.31□□□□□ -0.6
PSMB3-210ENST00000618159 GAS2L1Q99501 681 aaPredicted RBP11.31□□□□□ -0.6
PSMB3-210ENST00000618159 FBXO3Q9UK99 471 aa11.31□□□□□ -0.6
PSMB3-210ENST00000618159 SALL2Q9Y467 1007 aaPredicted RBP11.31□□□□□ -0.6
PSMB3-210ENST00000618159 TACC3Q9Y6A5 838 aa11.31□□□□□ -0.6
PSMB3-210ENST00000618159 A0A0G2JMZ2 1700 aa11.3□□□□□ -0.6
PSMB3-210ENST00000618159 KIAA0355O15063 1070 aa11.3□□□□□ -0.6
PSMB3-210ENST00000618159 GDF11O95390 407 aa11.3□□□□□ -0.6
PSMB3-210ENST00000618159 MYCNP04198 464 aaPredicted RBP11.3□□□□□ -0.6
PSMB3-210ENST00000618159 CLTBP09497 229 aa11.3□□□□□ -0.6
PSMB3-210ENST00000618159 ADGRE1Q14246 886 aa11.3□□□□□ -0.6
PSMB3-210ENST00000618159 USP17L2Q6R6M4 530 aa11.3□□□□□ -0.6
PSMB3-210ENST00000618159 METTL16Q86W50 562 aaKnown RBP11.3□□□□□ -0.6
PSMB3-210ENST00000618159 TEX11Q8IYF3 940 aa11.3□□□□□ -0.6
PSMB3-210ENST00000618159 NSUN4Q96CB9 384 aaKnown RBP11.3□□□□□ -0.6
PSMB3-210ENST00000618159 PRDM12Q9H4Q4 367 aa11.3□□□□□ -0.6
PSMB3-210ENST00000618159 BTBD7Q9P203 1132 aa11.3□□□□□ -0.6
PSMB3-210ENST00000618159 ZBTB21Q9ULJ3 1066 aa11.3□□□□□ -0.6
PSMB3-210ENST00000618159 ARIH1Q9Y4X5 557 aaPredicted RBP11.3□□□□□ -0.6
PSMB3-210ENST00000618159 IVNS1ABPQ9Y6Y0 642 aa11.3□□□□□ -0.6
PSMB3-210ENST00000618159 PARP14Q460N5 1801 aa11.3□□□□□ -0.6
PSMB3-210ENST00000618159 USP17L15C9J2P7 530 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 USP17L13C9JLJ4 530 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 USP17L11C9JVI0 530 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 USP17L18D6R9N7 530 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 USP17L22D6RA61 530 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 USP17L17D6RBQ6 530 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 USP17L19D6RCP7 530 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 USP17L20D6RJB6 530 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 SEPT4O43236 478 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 LDHCP07864 332 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 PBX2P40425 430 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 TIMM10P62072 90 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 FPGSQ05932 587 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 USP17L24Q0WX57 530 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 CCDC85BQ15834 202 aaPredicted RBP11.29□□□□□ -0.6
PSMB3-210ENST00000618159 FAM47AQ5JRC9 791 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 PRAMEF19Q5SWL8 479 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 OLFML2BQ68BL8 750 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 LBX2Q6XYB7 198 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 SH3RF3Q8TEJ3 882 aaPredicted RBP11.29□□□□□ -0.6
PSMB3-210ENST00000618159 C12orf42Q96LP6 360 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 C1QTNF1Q9BXJ1 281 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 DHX36Q9H2U1 1008 aaKnown RBP11.29□□□□□ -0.6
PSMB3-210ENST00000618159 GINM1Q9NU53 330 aa11.29□□□□□ -0.6
PSMB3-210ENST00000618159 PA2G4Q9UQ80 394 aaKnown RBP11.29□□□□□ -0.6
PSMB3-210ENST00000618159 COL11A1P12107 1806 aaPredicted RBP11.29□□□□□ -0.6
PSMB3-210ENST00000618159 PRRC2BQ5JSZ5 2229 aaKnown RBP11.28□□□□□ -0.6
PSMB3-210ENST00000618159 GRXCR1A8MXD5 290 aa11.28□□□□□ -0.6
PSMB3-210ENST00000618159 RAG1P15918 1043 aa11.28□□□□□ -0.6
PSMB3-210ENST00000618159 IL15P40933 162 aaPredicted RBP11.28□□□□□ -0.6
PSMB3-210ENST00000618159 GSTO1P78417 241 aa11.28□□□□□ -0.6
PSMB3-210ENST00000618159 ZYXQ15942 572 aaKnown RBP11.28□□□□□ -0.6
PSMB3-210ENST00000618159 PI16Q6UXB8 463 aa11.28□□□□□ -0.6
PSMB3-210ENST00000618159 CATSPERGQ6ZRH7 1159 aa11.28□□□□□ -0.6
PSMB3-210ENST00000618159 TBC1D9Q6ZT07 1266 aa11.28□□□□□ -0.6
PSMB3-210ENST00000618159 MRPL50Q8N5N7 158 aaKnown RBP11.28□□□□□ -0.6
PSMB3-210ENST00000618159 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.28□□□□□ -0.6
PSMB3-210ENST00000618159 PBX4Q9BYU1 374 aa11.28□□□□□ -0.6
PSMB3-210ENST00000618159 PHF24Q9UPV7 400 aa11.28□□□□□ -0.6
PSMB3-210ENST00000618159 BMP1P13497 986 aa11.27□□□□□ -0.61
PSMB3-210ENST00000618159 ADORA2AP29274 412 aa11.27□□□□□ -0.61
PSMB3-210ENST00000618159 DPP9Q86TI2 863 aa11.27□□□□□ -0.61
PSMB3-210ENST00000618159 FOXP4Q8IVH2 680 aaPredicted RBP11.27□□□□□ -0.61
PSMB3-210ENST00000618159 IL27Q8NEV9 243 aa11.27□□□□□ -0.61
PSMB3-210ENST00000618159 XAGE2Q96GT9 111 aa11.27□□□□□ -0.61
PSMB3-210ENST00000618159 LRFN3Q9BTN0 628 aa11.27□□□□□ -0.61
PSMB3-210ENST00000618159 HMG20BQ9P0W2 317 aa11.27□□□□□ -0.61
PSMB3-210ENST00000618159 A0A1B0GUL7 405 aa11.26□□□□□ -0.61
PSMB3-210ENST00000618159 SPDYE16A6NNV3 312 aaPredicted RBP11.26□□□□□ -0.61
PSMB3-210ENST00000618159 PQBP1O60828 265 aaKnown RBP11.26□□□□□ -0.61
PSMB3-210ENST00000618159 COBLO75128 1261 aa11.26□□□□□ -0.61
PSMB3-210ENST00000618159 VCAM1P19320 739 aa11.26□□□□□ -0.61
PSMB3-210ENST00000618159 FAAP100Q0VG06 881 aa11.26□□□□□ -0.61
PSMB3-210ENST00000618159 RASIP1Q5U651 963 aa11.26□□□□□ -0.61
PSMB3-210ENST00000618159 MAPKAPK5Q8IW41 473 aa11.26□□□□□ -0.61
PSMB3-210ENST00000618159 CRACR2BQ8N4Y2 399 aaPredicted RBP11.26□□□□□ -0.61
PSMB3-210ENST00000618159 TGFBRAP1Q8WUH2 860 aa11.26□□□□□ -0.61
PSMB3-210ENST00000618159 EPHX3Q9H6B9 360 aa11.26□□□□□ -0.61
PSMB3-210ENST00000618159 TMEM39AQ9NV64 488 aa11.26□□□□□ -0.61
PSMB3-210ENST00000618159 PALD1Q9ULE6 856 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms