RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 IFNL3Q8IZI9 196 aa29.77■■■□□ 2.36
PMS1-220ENST00000618056 SMCR8Q8TEV9 937 aaPredicted RBP29.77■■■□□ 2.36
PMS1-220ENST00000618056 C12orf42Q96LP6 360 aa29.77■■■□□ 2.36
PMS1-220ENST00000618056 NACAP1Q9BZK3 213 aa29.77■■■□□ 2.36
PMS1-220ENST00000618056 KIAA1683Q9H0B3 1180 aa29.77■■■□□ 2.36
PMS1-220ENST00000618056 MPHOSPH10O00566 681 aaKnown RBP29.76■■■□□ 2.35
PMS1-220ENST00000618056 USP14P54578 494 aa29.76■■■□□ 2.35
PMS1-220ENST00000618056 EMILIN3Q9NT22 766 aa29.76■■■□□ 2.35
PMS1-220ENST00000618056 GNRH1P01148 92 aa29.75■■■□□ 2.35
PMS1-220ENST00000618056 OSBPP22059 807 aa29.75■■■□□ 2.35
PMS1-220ENST00000618056 RILPL2Q969X0 211 aa29.75■■■□□ 2.35
PMS1-220ENST00000618056 FEZ1Q99689 392 aa29.75■■■□□ 2.35
PMS1-220ENST00000618056 ASCC2Q9H1I8 757 aaPredicted RBP29.75■■■□□ 2.35
PMS1-220ENST00000618056 HPS5Q9UPZ3 1129 aa29.75■■■□□ 2.35
PMS1-220ENST00000618056 PTPN22Q9Y2R2 807 aa29.75■■■□□ 2.35
PMS1-220ENST00000618056 DOCK3Q8IZD9 2030 aa29.75■■■□□ 2.35
PMS1-220ENST00000618056 AKR1B1P15121 316 aa29.74■■■□□ 2.35
PMS1-220ENST00000618056 PDE4AP27815 886 aa29.74■■■□□ 2.35
PMS1-220ENST00000618056 ACER1Q8TDN7 264 aa29.74■■■□□ 2.35
PMS1-220ENST00000618056 ARHGAP39Q9C0H5 1083 aa29.74■■■□□ 2.35
PMS1-220ENST00000618056 MINDY4BA8MYZ0 360 aa29.74■■■□□ 2.35
PMS1-220ENST00000618056 CCDC129Q6ZRS4 1044 aa29.74■■■□□ 2.35
PMS1-220ENST00000618056 FOXP2O15409 715 aa29.73■■■□□ 2.35
PMS1-220ENST00000618056 MCMDC2Q4G0Z9 681 aa29.73■■■□□ 2.35
PMS1-220ENST00000618056 FAM227BQ96M60 508 aa29.73■■■□□ 2.35
PMS1-220ENST00000618056 NAPBQ9H115 298 aa29.73■■■□□ 2.35
PMS1-220ENST00000618056 A0A0D9SFI3 127 aa29.72■■■□□ 2.35
PMS1-220ENST00000618056 CCDC85CA6NKD9 419 aa29.72■■■□□ 2.35
PMS1-220ENST00000618056 GCLCP48506 637 aaPredicted RBP29.72■■■□□ 2.35
PMS1-220ENST00000618056 IRX3P78415 501 aaPredicted RBP29.71■■■□□ 2.35
PMS1-220ENST00000618056 A0A1W2PRG0 241 aa29.7■■■□□ 2.35
PMS1-220ENST00000618056 SDSP20132 328 aa29.7■■■□□ 2.35
PMS1-220ENST00000618056 RASA1P20936 1047 aa29.7■■■□□ 2.35
PMS1-220ENST00000618056 CTGFP29279 349 aa29.7■■■□□ 2.35
PMS1-220ENST00000618056 PSMC4P43686 418 aa29.7■■■□□ 2.35
PMS1-220ENST00000618056 NMIQ13287 307 aaPredicted RBP29.7■■■□□ 2.35
PMS1-220ENST00000618056 ZYXQ15942 572 aaKnown RBP29.7■■■□□ 2.35
PMS1-220ENST00000618056 FAM110CQ1W6H9 321 aa29.7■■■□□ 2.35
PMS1-220ENST00000618056 ZNF287Q9HBT7 754 aa29.7■■■□□ 2.35
PMS1-220ENST00000618056 SIAH1Q8IUQ4 282 aa29.69■■■□□ 2.34
PMS1-220ENST00000618056 TRIM47Q96LD4 638 aa29.69■■■□□ 2.34
PMS1-220ENST00000618056 MKNK2Q9HBH9 465 aa29.69■■■□□ 2.34
PMS1-220ENST00000618056 PRMT2P55345 433 aa29.68■■■□□ 2.34
PMS1-220ENST00000618056 ICA1Q05084 483 aa29.68■■■□□ 2.34
PMS1-220ENST00000618056 VPS53Q5VIR6 699 aa29.68■■■□□ 2.34
PMS1-220ENST00000618056 ANKRD13CQ8N6S4 541 aa29.68■■■□□ 2.34
PMS1-220ENST00000618056 KANSL2Q9H9L4 492 aa29.68■■■□□ 2.34
PMS1-220ENST00000618056 VCAM1P19320 739 aa29.68■■■□□ 2.34
PMS1-220ENST00000618056 ALX1Q15699 326 aa29.68■■■□□ 2.34
PMS1-220ENST00000618056 ARHGEF10LQ9HCE6 1279 aa29.68■■■□□ 2.34
PMS1-220ENST00000618056 MYH4Q9Y623 1939 aa29.67■■■□□ 2.34
PMS1-220ENST00000618056 USP17L15C9J2P7 530 aa29.67■■■□□ 2.34
PMS1-220ENST00000618056 USP17L13C9JLJ4 530 aa29.67■■■□□ 2.34
PMS1-220ENST00000618056 USP17L11C9JVI0 530 aa29.67■■■□□ 2.34
PMS1-220ENST00000618056 USP17L18D6R9N7 530 aa29.67■■■□□ 2.34
PMS1-220ENST00000618056 USP17L22D6RA61 530 aa29.67■■■□□ 2.34
PMS1-220ENST00000618056 USP17L17D6RBQ6 530 aa29.67■■■□□ 2.34
PMS1-220ENST00000618056 USP17L19D6RCP7 530 aa29.67■■■□□ 2.34
PMS1-220ENST00000618056 USP17L20D6RJB6 530 aa29.67■■■□□ 2.34
PMS1-220ENST00000618056 FCGRTP55899 365 aa29.67■■■□□ 2.34
PMS1-220ENST00000618056 HERVK_113P62684 666 aa29.67■■■□□ 2.34
PMS1-220ENST00000618056 PPARAQ07869 468 aa29.67■■■□□ 2.34
PMS1-220ENST00000618056 USP17L24Q0WX57 530 aa29.67■■■□□ 2.34
PMS1-220ENST00000618056 P2RX7Q99572 595 aaKnown RBP29.67■■■□□ 2.34
PMS1-220ENST00000618056 SH2D4AQ9H788 454 aa29.67■■■□□ 2.34
PMS1-220ENST00000618056 TMX2Q9Y320 296 aa29.67■■■□□ 2.34
PMS1-220ENST00000618056 KIAA0100Q14667 2235 aaKnown RBP29.66■■■□□ 2.34
PMS1-220ENST00000618056 HIP1O00291 1037 aa29.66■■■□□ 2.34
PMS1-220ENST00000618056 FMNL1O95466 1100 aaPredicted RBP29.66■■■□□ 2.34
PMS1-220ENST00000618056 HOXD10P28358 340 aa29.66■■■□□ 2.34
PMS1-220ENST00000618056 TTC22Q5TAA0 569 aa29.66■■■□□ 2.34
PMS1-220ENST00000618056 ZNF589Q86UQ0 364 aaPredicted RBP29.66■■■□□ 2.34
PMS1-220ENST00000618056 CLEC10AQ8IUN9 316 aa29.66■■■□□ 2.34
PMS1-220ENST00000618056 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.66■■■□□ 2.34
PMS1-220ENST00000618056 MORF4L1Q9UBU8 362 aa29.66■■■□□ 2.34
PMS1-220ENST00000618056 CCDC171Q6TFL3 1326 aa29.65■■■□□ 2.34
PMS1-220ENST00000618056 RLFQ13129 1914 aa29.65■■■□□ 2.34
PMS1-220ENST00000618056 SLC3A2P08195 630 aaKnown RBP29.65■■■□□ 2.34
PMS1-220ENST00000618056 PDE4BQ07343 736 aa29.65■■■□□ 2.34
PMS1-220ENST00000618056 CATSPERGQ6ZRH7 1159 aa29.65■■■□□ 2.34
PMS1-220ENST00000618056 STK11IPQ8N1F8 1099 aa29.65■■■□□ 2.34
PMS1-220ENST00000618056 GTF3C2Q8WUA4 911 aaPredicted RBP29.65■■■□□ 2.34
PMS1-220ENST00000618056 SRRDQ9UH36 339 aa29.65■■■□□ 2.34
PMS1-220ENST00000618056 MFAP1P55081 439 aaKnown RBP29.64■■■□□ 2.34
PMS1-220ENST00000618056 ZMYM6O95789 1325 aa29.64■■■□□ 2.33
PMS1-220ENST00000618056 PARP14Q460N5 1801 aa29.63■■■□□ 2.33
PMS1-220ENST00000618056 GSPT1P15170 499 aaKnown RBP29.63■■■□□ 2.33
PMS1-220ENST00000618056 ZNF444Q8N0Y2 327 aaPredicted RBP29.63■■■□□ 2.33
PMS1-220ENST00000618056 LPAR1Q92633 364 aa29.63■■■□□ 2.33
PMS1-220ENST00000618056 DIAPH3Q9NSV4 1193 aa29.63■■■□□ 2.33
PMS1-220ENST00000618056 PTCH2Q9Y6C5 1203 aa29.63■■■□□ 2.33
PMS1-220ENST00000618056 HSPD1P10809 573 aaKnown RBP29.62■■■□□ 2.33
PMS1-220ENST00000618056 EEF2P13639 858 aaKnown RBP29.62■■■□□ 2.33
PMS1-220ENST00000618056 ANAPC4Q9UJX5 808 aa29.62■■■□□ 2.33
PMS1-220ENST00000618056 BRCA2P51587 3418 aa29.62■■■□□ 2.33
PMS1-220ENST00000618056 PRDM1O75626 825 aa29.61■■■□□ 2.33
PMS1-220ENST00000618056 ECM2O94769 699 aaPredicted RBP29.61■■■□□ 2.33
PMS1-220ENST00000618056 ARMC5Q96C12 935 aa29.61■■■□□ 2.33
PMS1-220ENST00000618056 RPAP3Q9H6T3 665 aaPredicted RBP29.61■■■□□ 2.33
PMS1-220ENST00000618056 VCPKMTQ9H867 229 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms