RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 SF3A1Q15459 793 aaKnown RBP20.26■□□□□ 0.83
CNOT3-209ENST00000617930 SAP30BPQ9UHR5 308 aaKnown RBP20.26■□□□□ 0.83
CNOT3-209ENST00000617930 PSME4Q14997 1843 aa20.25■□□□□ 0.83
CNOT3-209ENST00000617930 A0A1B0GVL5 298 aa20.25■□□□□ 0.83
CNOT3-209ENST00000617930 PPIP5K2O43314 1243 aa20.25■□□□□ 0.83
CNOT3-209ENST00000617930 BAG3O95817 575 aa20.25■□□□□ 0.83
CNOT3-209ENST00000617930 TOB1P50616 345 aaPredicted RBP20.25■□□□□ 0.83
CNOT3-209ENST00000617930 UVSSAQ2YD98 709 aa20.25■□□□□ 0.83
CNOT3-209ENST00000617930 FMR1NBQ8N0W7 255 aaPredicted RBP20.25■□□□□ 0.83
CNOT3-209ENST00000617930 FSIP1Q8NA03 581 aa20.25■□□□□ 0.83
CNOT3-209ENST00000617930 OXER1Q8TDS5 423 aa20.25■□□□□ 0.83
CNOT3-209ENST00000617930 FOCADQ5VW36 1801 aa20.25■□□□□ 0.83
CNOT3-209ENST00000617930 FER1L6Q2WGJ9 1857 aa20.25■□□□□ 0.83
CNOT3-209ENST00000617930 CCDC196A0A1B0GTZ2 297 aa20.24■□□□□ 0.83
CNOT3-209ENST00000617930 DEXIO95424 95 aa20.24■□□□□ 0.83
CNOT3-209ENST00000617930 STK38Q15208 465 aa20.24■□□□□ 0.83
CNOT3-209ENST00000617930 NLGN2Q8NFZ4 835 aa20.24■□□□□ 0.83
CNOT3-209ENST00000617930 PIM2Q9P1W9 311 aa20.24■□□□□ 0.83
CNOT3-209ENST00000617930 TTF2Q9UNY4 1162 aaKnown RBP20.24■□□□□ 0.83
CNOT3-209ENST00000617930 ROBO3Q96MS0 1386 aa20.24■□□□□ 0.83
CNOT3-209ENST00000617930 LDHCP07864 332 aa20.24■□□□□ 0.83
CNOT3-209ENST00000617930 CCDC192P0DO97 292 aa20.24■□□□□ 0.83
CNOT3-209ENST00000617930 MARCKSP29966 332 aaPredicted RBP20.24■□□□□ 0.83
CNOT3-209ENST00000617930 NDUFA8P51970 172 aa20.24■□□□□ 0.83
CNOT3-209ENST00000617930 TFAP4Q01664 338 aa20.24■□□□□ 0.83
CNOT3-209ENST00000617930 PDE4BQ07343 736 aa20.24■□□□□ 0.83
CNOT3-209ENST00000617930 SLC39A14Q15043 492 aa20.24■□□□□ 0.83
CNOT3-209ENST00000617930 CATIPQ7Z7H3 387 aa20.24■□□□□ 0.83
CNOT3-209ENST00000617930 PSMD1Q99460 953 aa20.24■□□□□ 0.83
CNOT3-209ENST00000617930 A0A1W2PQ27 194 aa20.23■□□□□ 0.83
CNOT3-209ENST00000617930 A0A1W2PQ64 194 aa20.23■□□□□ 0.83
CNOT3-209ENST00000617930 A0A1W2PQD8 194 aa20.23■□□□□ 0.83
CNOT3-209ENST00000617930 G3V3G9 751 aa20.23■□□□□ 0.83
CNOT3-209ENST00000617930 VEGFAP15692 232 aaPredicted RBP20.23■□□□□ 0.83
CNOT3-209ENST00000617930 FAM160A1Q05DH4 1040 aa20.23■□□□□ 0.83
CNOT3-209ENST00000617930 NR5A1Q13285 461 aa20.23■□□□□ 0.83
CNOT3-209ENST00000617930 HSP90AA2PQ14568 343 aaPredicted RBP20.23■□□□□ 0.83
CNOT3-209ENST00000617930 DCAF8Q5TAQ9 597 aa20.23■□□□□ 0.83
CNOT3-209ENST00000617930 ILDR2Q71H61 639 aa20.23■□□□□ 0.83
CNOT3-209ENST00000617930 DIS3L2Q8IYB7 885 aaKnown RBP20.23■□□□□ 0.83
CNOT3-209ENST00000617930 TRIM22Q8IYM9 498 aa20.23■□□□□ 0.83
CNOT3-209ENST00000617930 SRBD1Q8N5C6 995 aaKnown RBP20.23■□□□□ 0.83
CNOT3-209ENST00000617930 KCNG4Q8TDN1 519 aa20.23■□□□□ 0.83
CNOT3-209ENST00000617930 RNF26Q9BY78 433 aaPredicted RBP20.23■□□□□ 0.83
CNOT3-209ENST00000617930 USP25Q9UHP3 1055 aa20.23■□□□□ 0.83
CNOT3-209ENST00000617930 A0A087WWV3 80 aa20.22■□□□□ 0.83
CNOT3-209ENST00000617930 USP17L3A6NCW0 530 aa20.22■□□□□ 0.83
CNOT3-209ENST00000617930 USP17L4A6NCW7 530 aa20.22■□□□□ 0.83
CNOT3-209ENST00000617930 TSPY2A6NKD2 308 aa20.22■□□□□ 0.83
CNOT3-209ENST00000617930 RRP9O43818 475 aaKnown RBP20.22■□□□□ 0.83
CNOT3-209ENST00000617930 STRIP1Q5VSL9 837 aa20.22■□□□□ 0.83
CNOT3-209ENST00000617930 USP17L1Q7RTZ2 530 aa20.22■□□□□ 0.83
CNOT3-209ENST00000617930 ERCC4Q92889 916 aaPredicted RBP20.22■□□□□ 0.83
CNOT3-209ENST00000617930 R3HCC1Q9Y3T6 440 aaKnown RBP20.22■□□□□ 0.83
CNOT3-209ENST00000617930 V9GY48 417 aaPredicted RBP20.22■□□□□ 0.83
CNOT3-209ENST00000617930 SLC3A2P08195 630 aaKnown RBP20.22■□□□□ 0.83
CNOT3-209ENST00000617930 TRIM29Q14134 588 aa20.22■□□□□ 0.83
CNOT3-209ENST00000617930 TMTC3Q6ZXV5 915 aa20.22■□□□□ 0.83
CNOT3-209ENST00000617930 KIAA0825Q8IV33 1275 aa20.22■□□□□ 0.83
CNOT3-209ENST00000617930 NOSTRINQ8IVI9 506 aa20.22■□□□□ 0.83
CNOT3-209ENST00000617930 MRPS27Q92552 414 aaKnown RBP20.22■□□□□ 0.83
CNOT3-209ENST00000617930 WASF1Q92558 559 aa20.22■□□□□ 0.83
CNOT3-209ENST00000617930 FLT1P17948 1338 aa20.21■□□□□ 0.83
CNOT3-209ENST00000617930 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.21■□□□□ 0.83
CNOT3-209ENST00000617930 PRPF3O43395 683 aaKnown RBP20.21■□□□□ 0.83
CNOT3-209ENST00000617930 DDAH1O94760 285 aa20.21■□□□□ 0.83
CNOT3-209ENST00000617930 PPP2R5BQ15173 497 aa20.21■□□□□ 0.83
CNOT3-209ENST00000617930 RTKN2Q8IZC4 609 aa20.21■□□□□ 0.83
CNOT3-209ENST00000617930 VPS54Q9P1Q0 977 aa20.21■□□□□ 0.83
CNOT3-209ENST00000617930 SUGT1Q9Y2Z0 365 aa20.21■□□□□ 0.83
CNOT3-209ENST00000617930 NFKBIEO00221 500 aa20.2■□□□□ 0.83
CNOT3-209ENST00000617930 PRELPP51888 382 aa20.2■□□□□ 0.83
CNOT3-209ENST00000617930 TERF1P54274 439 aa20.2■□□□□ 0.83
CNOT3-209ENST00000617930 ANO6Q4KMQ2 910 aa20.2■□□□□ 0.83
CNOT3-209ENST00000617930 EARS2Q5JPH6 523 aaKnown RBP20.2■□□□□ 0.83
CNOT3-209ENST00000617930 APOBEC3HQ6NTF7 200 aaKnown RBP20.2■□□□□ 0.83
CNOT3-209ENST00000617930 TEX11Q8IYF3 940 aa20.2■□□□□ 0.83
CNOT3-209ENST00000617930 DDX4Q9NQI0 724 aaKnown RBP20.2■□□□□ 0.83
CNOT3-209ENST00000617930 CNTNAP5Q8WYK1 1306 aa20.2■□□□□ 0.82
CNOT3-209ENST00000617930 RASA1P20936 1047 aa20.2■□□□□ 0.82
CNOT3-209ENST00000617930 NPY5RQ15761 445 aa20.2■□□□□ 0.82
CNOT3-209ENST00000617930 DALRD3Q5D0E6 543 aaKnown RBP20.2■□□□□ 0.82
CNOT3-209ENST00000617930 CCDC73Q6ZRK6 1079 aa20.2■□□□□ 0.82
CNOT3-209ENST00000617930 SUPT20HQ8NEM7 779 aa20.2■□□□□ 0.82
CNOT3-209ENST00000617930 CD2APQ9Y5K6 639 aa20.2■□□□□ 0.82
CNOT3-209ENST00000617930 MYH1P12882 1939 aa20.19■□□□□ 0.82
CNOT3-209ENST00000617930 FAM205CA6NFA0 338 aa20.19■□□□□ 0.82
CNOT3-209ENST00000617930 ADAMTS3O15072 1205 aa20.19■□□□□ 0.82
CNOT3-209ENST00000617930 PRKCSHP14314 528 aaPredicted RBP20.19■□□□□ 0.82
CNOT3-209ENST00000617930 LUZP1Q86V48 1076 aa20.19■□□□□ 0.82
CNOT3-209ENST00000617930 CLIC6Q96NY7 704 aa20.19■□□□□ 0.82
CNOT3-209ENST00000617930 GNL2Q13823 731 aaKnown RBP20.19■□□□□ 0.82
CNOT3-209ENST00000617930 SLC35G1Q2M3R5 365 aa20.19■□□□□ 0.82
CNOT3-209ENST00000617930 NOM1Q5C9Z4 860 aaKnown RBP20.19■□□□□ 0.82
CNOT3-209ENST00000617930 SHC4Q6S5L8 630 aa20.19■□□□□ 0.82
CNOT3-209ENST00000617930 ANKS1AQ92625 1134 aa20.19■□□□□ 0.82
CNOT3-209ENST00000617930 FOXP1Q9H334 677 aaPredicted RBP20.19■□□□□ 0.82
CNOT3-209ENST00000617930 CBX8Q9HC52 389 aa20.19■□□□□ 0.82
CNOT3-209ENST00000617930 RBM28Q9NW13 759 aaKnown RBP20.19■□□□□ 0.82
CNOT3-209ENST00000617930 CALM1P0DP23 149 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms