RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 BRD1O95696 1058 aa19.58■□□□□ 0.73
TRAPPC3-210ENST00000617904 MCM4P33991 863 aa19.58■□□□□ 0.73
TRAPPC3-210ENST00000617904 GRIK5Q16478 980 aa19.58■□□□□ 0.73
TRAPPC3-210ENST00000617904 SKOR2Q2VWA4 1001 aaPredicted RBP19.58■□□□□ 0.73
TRAPPC3-210ENST00000617904 CLEC17AQ6ZS10 378 aa19.58■□□□□ 0.73
TRAPPC3-210ENST00000617904 KIAA0825Q8IV33 1275 aa19.58■□□□□ 0.73
TRAPPC3-210ENST00000617904 WASF1Q92558 559 aa19.58■□□□□ 0.73
TRAPPC3-210ENST00000617904 ZSCAN10Q96SZ4 725 aaPredicted RBP19.58■□□□□ 0.73
TRAPPC3-210ENST00000617904 LAMB1P07942 1786 aa19.57■□□□□ 0.72
TRAPPC3-210ENST00000617904 FLT1P17948 1338 aa19.57■□□□□ 0.72
TRAPPC3-210ENST00000617904 ZSCAN22P10073 491 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC3-210ENST00000617904 SYT1P21579 422 aa19.57■□□□□ 0.72
TRAPPC3-210ENST00000617904 SCRN1Q12765 414 aa19.57■□□□□ 0.72
TRAPPC3-210ENST00000617904 IFIT1BQ5T764 474 aaKnown RBP19.57■□□□□ 0.72
TRAPPC3-210ENST00000617904 CATIPQ7Z7H3 387 aa19.57■□□□□ 0.72
TRAPPC3-210ENST00000617904 STK11IPQ8N1F8 1099 aa19.57■□□□□ 0.72
TRAPPC3-210ENST00000617904 CERS5Q8N5B7 392 aa19.57■□□□□ 0.72
TRAPPC3-210ENST00000617904 RGS22Q8NE09 1264 aa19.57■□□□□ 0.72
TRAPPC3-210ENST00000617904 IGDCC4Q8TDY8 1250 aa19.57■□□□□ 0.72
TRAPPC3-210ENST00000617904 GOLGA8AA7E2F4 631 aa19.56■□□□□ 0.72
TRAPPC3-210ENST00000617904 UBE2Q2LH0YL09 131 aa19.56■□□□□ 0.72
TRAPPC3-210ENST00000617904 NCLP19338 710 aaKnown RBP19.56■□□□□ 0.72
TRAPPC3-210ENST00000617904 RHBDL3P58872 404 aa19.56■□□□□ 0.72
TRAPPC3-210ENST00000617904 CCT2P78371 535 aaKnown RBP19.56■□□□□ 0.72
TRAPPC3-210ENST00000617904 APOA5Q6Q788 366 aa19.56■□□□□ 0.72
TRAPPC3-210ENST00000617904 TRIM34Q9BYJ4 488 aa19.56■□□□□ 0.72
TRAPPC3-210ENST00000617904 DHX36Q9H2U1 1008 aaKnown RBP19.56■□□□□ 0.72
TRAPPC3-210ENST00000617904 LY9Q9HBG7 655 aa19.56■□□□□ 0.72
TRAPPC3-210ENST00000617904 SWAP70Q9UH65 585 aa19.56■□□□□ 0.72
TRAPPC3-210ENST00000617904 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.56■□□□□ 0.72
TRAPPC3-210ENST00000617904 NAV1Q8NEY1 1877 aa19.56■□□□□ 0.72
TRAPPC3-210ENST00000617904 TNKSO95271 1327 aa19.56■□□□□ 0.72
TRAPPC3-210ENST00000617904 VPS37CA5D8V6 355 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC3-210ENST00000617904 NPM3O75607 178 aaKnown RBP19.55■□□□□ 0.72
TRAPPC3-210ENST00000617904 TSPY3P0CV98 308 aa19.55■□□□□ 0.72
TRAPPC3-210ENST00000617904 TSPY8P0CW00 308 aa19.55■□□□□ 0.72
TRAPPC3-210ENST00000617904 REM2Q8IYK8 340 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC3-210ENST00000617904 TRIM22Q8IYM9 498 aa19.55■□□□□ 0.72
TRAPPC3-210ENST00000617904 SMARCC2Q8TAQ2 1214 aa19.55■□□□□ 0.72
TRAPPC3-210ENST00000617904 ZBED3Q96IU2 234 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC3-210ENST00000617904 PTPDC1A2A3K4 754 aa19.54■□□□□ 0.72
TRAPPC3-210ENST00000617904 RBM28Q9NW13 759 aaKnown RBP19.54■□□□□ 0.72
TRAPPC3-210ENST00000617904 SAP30BPQ9UHR5 308 aaKnown RBP19.54■□□□□ 0.72
TRAPPC3-210ENST00000617904 CYP2D7A0A087X1C5 515 aa19.53■□□□□ 0.72
TRAPPC3-210ENST00000617904 MYO1BO43795 1136 aa19.53■□□□□ 0.72
TRAPPC3-210ENST00000617904 DDAH1O94760 285 aa19.53■□□□□ 0.72
TRAPPC3-210ENST00000617904 BAG4O95429 457 aaKnown RBP19.53■□□□□ 0.72
TRAPPC3-210ENST00000617904 AKAP17AQ02040 695 aaKnown RBP19.53■□□□□ 0.72
TRAPPC3-210ENST00000617904 MLLT1Q03111 559 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC3-210ENST00000617904 PICALMQ13492 652 aa19.53■□□□□ 0.72
TRAPPC3-210ENST00000617904 TRIM29Q14134 588 aa19.53■□□□□ 0.72
TRAPPC3-210ENST00000617904 C16orf86Q6ZW13 317 aa19.53■□□□□ 0.72
TRAPPC3-210ENST00000617904 MICU3Q86XE3 530 aa19.53■□□□□ 0.72
TRAPPC3-210ENST00000617904 ZSCAN16Q9H4T2 348 aaPredicted RBP19.53■□□□□ 0.72
TRAPPC3-210ENST00000617904 F13A1P00488 732 aa19.52■□□□□ 0.72
TRAPPC3-210ENST00000617904 DLGAP5Q15398 846 aa19.52■□□□□ 0.72
TRAPPC3-210ENST00000617904 RTN1Q16799 776 aa19.52■□□□□ 0.72
TRAPPC3-210ENST00000617904 CDC42EP5Q6NZY7 148 aa19.52■□□□□ 0.72
TRAPPC3-210ENST00000617904 DGKHQ86XP1 1220 aa19.52■□□□□ 0.72
TRAPPC3-210ENST00000617904 NSUN7Q8NE18 718 aaKnown RBP19.52■□□□□ 0.72
TRAPPC3-210ENST00000617904 KAT14Q9H8E8 782 aa19.52■□□□□ 0.72
TRAPPC3-210ENST00000617904 TCP11L1Q9NUJ3 509 aa19.52■□□□□ 0.72
TRAPPC3-210ENST00000617904 BRPF3Q9ULD4 1205 aa19.52■□□□□ 0.72
TRAPPC3-210ENST00000617904 KIF5BP33176 963 aa19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 TFAP4Q01664 338 aa19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 ZNF654Q8IZM8 581 aa19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 CTCFLQ8NI51 663 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 ZKSCAN3Q9BRR0 538 aa19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 IDI2Q9BXS1 227 aa19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 INCENPQ9NQS7 918 aa19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 NID2Q14112 1375 aa19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 BAZ2AQ9UIF9 1905 aaKnown RBP19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 ENTPD3O75355 529 aa19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 PRDM1O75626 825 aa19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 CYP2D6P10635 497 aa19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 XBP1P17861 261 aa19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 SSRP1Q08945 709 aaKnown RBP19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 ST3GAL1Q11201 340 aa19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 COL9A3Q14050 684 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 TTLL12Q14166 644 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 CFAP100Q494V2 611 aa19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 APOBEC3HQ6NTF7 200 aaKnown RBP19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 APOBEC3FQ8IUX4 373 aaKnown RBP19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 CRACR2BQ8N4Y2 399 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 DDX11Q96FC9 970 aa19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 OSBPL5Q9H0X9 879 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 ORC3Q9UBD5 711 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 SERPINB13Q9UIV8 391 aa19.51■□□□□ 0.71
TRAPPC3-210ENST00000617904 NF2P35240 595 aa19.5■□□□□ 0.71
TRAPPC3-210ENST00000617904 CDK8P49336 464 aa19.5■□□□□ 0.71
TRAPPC3-210ENST00000617904 GNAQP50148 359 aa19.5■□□□□ 0.71
TRAPPC3-210ENST00000617904 MCTP1Q6DN14 999 aa19.5■□□□□ 0.71
TRAPPC3-210ENST00000617904 ZSCAN29Q8IWY8 852 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC3-210ENST00000617904 MTMR14Q8NCE2 650 aa19.5■□□□□ 0.71
TRAPPC3-210ENST00000617904 NUP133Q8WUM0 1156 aa19.5■□□□□ 0.71
TRAPPC3-210ENST00000617904 CCDC17Q96LX7 622 aa19.5■□□□□ 0.71
TRAPPC3-210ENST00000617904 EHD4Q9H223 541 aa19.5■□□□□ 0.71
TRAPPC3-210ENST00000617904 NCOA5Q9HCD5 579 aaKnown RBP19.5■□□□□ 0.71
TRAPPC3-210ENST00000617904 GPHNQ9NQX3 736 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC3-210ENST00000617904 RBM27Q9P2N5 1060 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms