RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 ITGAVP06756 1048 aa6.64□□□□□ -1.35
RFC3-203ENST00000616236 PABPC1P11940 636 aaKnown RBP6.64□□□□□ -1.35
RFC3-203ENST00000616236 LIG1P18858 919 aa6.64□□□□□ -1.35
RFC3-203ENST00000616236 NEK4P51957 841 aa6.64□□□□□ -1.35
RFC3-203ENST00000616236 PMS1P54277 932 aaKnown RBP6.64□□□□□ -1.35
RFC3-203ENST00000616236 PCBP4P57723 403 aaKnown RBP6.64□□□□□ -1.35
RFC3-203ENST00000616236 HDAC1Q13547 482 aaPredicted RBP6.64□□□□□ -1.35
RFC3-203ENST00000616236 SYCP2LQ5T4T6 812 aa6.64□□□□□ -1.35
RFC3-203ENST00000616236 ZNF468Q5VIY5 522 aaPredicted RBP6.64□□□□□ -1.35
RFC3-203ENST00000616236 TDRD10Q5VZ19 366 aaKnown RBP6.64□□□□□ -1.35
RFC3-203ENST00000616236 RNF219Q5W0B1 726 aaPredicted RBP6.64□□□□□ -1.35
RFC3-203ENST00000616236 PPP4R4Q6NUP7 873 aa6.64□□□□□ -1.35
RFC3-203ENST00000616236 NSMFQ6X4W1 530 aa6.64□□□□□ -1.35
RFC3-203ENST00000616236 TMEM192Q8IY95 271 aa6.64□□□□□ -1.35
RFC3-203ENST00000616236 TTC8Q8TAM2 541 aa6.64□□□□□ -1.35
RFC3-203ENST00000616236 SLC7A14Q8TBB6 771 aa6.64□□□□□ -1.35
RFC3-203ENST00000616236 PPP1R14AQ96A00 147 aa6.64□□□□□ -1.35
RFC3-203ENST00000616236 ZNF837Q96EG3 531 aaPredicted RBP6.64□□□□□ -1.35
RFC3-203ENST00000616236 SLC39A13Q96H72 371 aa6.64□□□□□ -1.35
RFC3-203ENST00000616236 DHRS1Q96LJ7 313 aa6.64□□□□□ -1.35
RFC3-203ENST00000616236 SLC6A18Q96N87 628 aa6.64□□□□□ -1.35
RFC3-203ENST00000616236 MPHOSPH6Q99547 160 aaKnown RBP6.64□□□□□ -1.35
RFC3-203ENST00000616236 AASDHPPTQ9NRN7 309 aa6.64□□□□□ -1.35
RFC3-203ENST00000616236 SFMBT1Q9UHJ3 866 aa6.64□□□□□ -1.35
RFC3-203ENST00000616236 GPR39O43194 453 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 AVPP01185 164 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 EPHX1P07099 455 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 CTSBP07858 339 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 FGFR1P11362 822 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 MAOBP27338 520 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 GRIA2P42262 883 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 C19orf57Q0VDD7 668 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 PDE3AQ14432 1141 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 STAT4Q14765 748 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 HEATR6Q6AI08 1181 aaKnown RBP6.63□□□□□ -1.35
RFC3-203ENST00000616236 PKN3Q6P5Z2 889 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 APBB1IPQ7Z5R6 666 aaPredicted RBP6.63□□□□□ -1.35
RFC3-203ENST00000616236 ZNF227Q86WZ6 799 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 CCDC155Q8N6L0 562 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 FAM13CQ8NE31 585 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 OSBP2Q969R2 916 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 EVI5LQ96CN4 794 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 HOOK2Q96ED9 719 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 WDR89Q96FK6 387 aaPredicted RBP6.63□□□□□ -1.35
RFC3-203ENST00000616236 GMCL1Q96IK5 515 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 FGD4Q96M96 766 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 YIPF4Q9BSR8 244 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 NRSN2Q9GZP1 204 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 TRIM39Q9HCM9 518 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 CHST12Q9NRB3 414 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 SUCOQ9UBS9 1254 aaKnown RBP6.63□□□□□ -1.35
RFC3-203ENST00000616236 APEX2Q9UBZ4 518 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 NDOR1Q9UHB4 597 aa6.63□□□□□ -1.35
RFC3-203ENST00000616236 TNPO3Q9Y5L0 923 aaKnown RBP6.63□□□□□ -1.35
RFC3-203ENST00000616236 FAM187AA6NFU0 413 aa6.62□□□□□ -1.35
RFC3-203ENST00000616236 LDHAP00338 332 aaKnown RBP6.62□□□□□ -1.35
RFC3-203ENST00000616236 POU3F2P20265 443 aaPredicted RBP6.62□□□□□ -1.35
RFC3-203ENST00000616236 ARL4DP49703 201 aa6.62□□□□□ -1.35
RFC3-203ENST00000616236 ETF1P62495 437 aaKnown RBP6.62□□□□□ -1.35
RFC3-203ENST00000616236 PIN1Q13526 163 aaPredicted RBP6.62□□□□□ -1.35
RFC3-203ENST00000616236 ZNF460Q14592 562 aa6.62□□□□□ -1.35
RFC3-203ENST00000616236 DHCR24Q15392 516 aa6.62□□□□□ -1.35
RFC3-203ENST00000616236 SEPT7Q16181 437 aaKnown RBP6.62□□□□□ -1.35
RFC3-203ENST00000616236 TRIM61Q5EBN2 209 aa6.62□□□□□ -1.35
RFC3-203ENST00000616236 TXNDC11Q6PKC3 985 aa6.62□□□□□ -1.35
RFC3-203ENST00000616236 BRAPQ7Z569 592 aa6.62□□□□□ -1.35
RFC3-203ENST00000616236 PHACTR4Q8IZ21 702 aa6.62□□□□□ -1.35
RFC3-203ENST00000616236 TNFRSF25Q93038 417 aa6.62□□□□□ -1.35
RFC3-203ENST00000616236 HAUS7Q99871 368 aa6.62□□□□□ -1.35
RFC3-203ENST00000616236 RTFDC1Q9BY42 306 aaPredicted RBP6.62□□□□□ -1.35
RFC3-203ENST00000616236 TRIM8Q9BZR9 551 aa6.62□□□□□ -1.35
RFC3-203ENST00000616236 MTFR1LQ9H019 292 aa6.62□□□□□ -1.35
RFC3-203ENST00000616236 CDH19Q9H159 772 aa6.62□□□□□ -1.35
RFC3-203ENST00000616236 LRRC4BQ9NT99 713 aa6.62□□□□□ -1.35
RFC3-203ENST00000616236 NOB1Q9ULX3 412 aaKnown RBP6.62□□□□□ -1.35
RFC3-203ENST00000616236 C9IYK1 514 aa6.61□□□□□ -1.35
RFC3-203ENST00000616236 C2CD2LO14523 706 aa6.61□□□□□ -1.35
RFC3-203ENST00000616236 RGS13O14921 159 aa6.61□□□□□ -1.35
RFC3-203ENST00000616236 NPTXRO95502 500 aa6.61□□□□□ -1.35
RFC3-203ENST00000616236 CAPNS1P04632 268 aa6.61□□□□□ -1.35
RFC3-203ENST00000616236 C6orf222P0C671 652 aaPredicted RBP6.61□□□□□ -1.35
RFC3-203ENST00000616236 ADH7P40394 386 aa6.61□□□□□ -1.35
RFC3-203ENST00000616236 YARSP54577 528 aaKnown RBP6.61□□□□□ -1.35
RFC3-203ENST00000616236 HLTFQ14527 1009 aaKnown RBP eCLIP6.61□□□□□ -1.35
RFC3-203ENST00000616236 FGD2Q7Z6J4 655 aa6.61□□□□□ -1.35
RFC3-203ENST00000616236 ZBTB46Q86UZ6 589 aa6.61□□□□□ -1.35
RFC3-203ENST00000616236 PASD1Q8IV76 773 aa6.61□□□□□ -1.35
RFC3-203ENST00000616236 MCATQ8IVS2 390 aaKnown RBP6.61□□□□□ -1.35
RFC3-203ENST00000616236 IL22RA1Q8N6P7 574 aa6.61□□□□□ -1.35
RFC3-203ENST00000616236 ZNF513Q8N8E2 541 aaPredicted RBP6.61□□□□□ -1.35
RFC3-203ENST00000616236 CHMP4CQ96CF2 233 aa6.61□□□□□ -1.35
RFC3-203ENST00000616236 WNT10AQ9GZT5 417 aa6.61□□□□□ -1.35
RFC3-203ENST00000616236 SLC52A2Q9HAB3 445 aa6.61□□□□□ -1.35
RFC3-203ENST00000616236 FRRS1LQ9P0K9 344 aa6.61□□□□□ -1.35
RFC3-203ENST00000616236 LINC01387J3KSC0 135 aa6.6□□□□□ -1.35
RFC3-203ENST00000616236 GPR25O00155 361 aa6.6□□□□□ -1.35
RFC3-203ENST00000616236 TBX1O43435 398 aa6.6□□□□□ -1.35
RFC3-203ENST00000616236 OPA1O60313 960 aa6.6□□□□□ -1.35
RFC3-203ENST00000616236 BRINP1O60477 761 aa6.6□□□□□ -1.35
RFC3-203ENST00000616236 KPNA6O60684 536 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms