RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.91■□□□□ 0.94
SPAST-203ENST00000615843 FAM169AQ9Y6X4 670 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 A0A1W2PQ27 194 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 A0A1W2PQ64 194 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 A0A1W2PQD8 194 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 STX2P32856 288 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 HSPA1LP34931 641 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 PEX19P40855 299 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 PPP2R5BQ15173 497 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 SLC35F6Q8N357 371 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 KIFAP3Q92845 792 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 RAB3IPQ96QF0 476 aaPredicted RBP20.91■□□□□ 0.94
SPAST-203ENST00000615843 PSMD1Q99460 953 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 PICALMQ13492 652 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 DDX23Q9BUQ8 820 aaKnown RBP20.91■□□□□ 0.94
SPAST-203ENST00000615843 KLHL14Q9P2G3 628 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 CALUO43852 315 aaPredicted RBP20.91■□□□□ 0.94
SPAST-203ENST00000615843 CLTAP09496 248 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 HOMER3Q9NSC5 361 aa20.91■□□□□ 0.94
SPAST-203ENST00000615843 NSFL1CQ9UNZ2 370 aaKnown RBP20.91■□□□□ 0.94
SPAST-203ENST00000615843 EPN1Q9Y6I3 576 aaPredicted RBP20.91■□□□□ 0.94
SPAST-203ENST00000615843 NCBP1Q09161 790 aaKnown RBP20.9■□□□□ 0.94
SPAST-203ENST00000615843 NBPF6Q5VWK0 638 aa20.9■□□□□ 0.94
SPAST-203ENST00000615843 SPATA1Q5VX52 437 aa20.9■□□□□ 0.94
SPAST-203ENST00000615843 NBPF4Q96M43 638 aa20.9■□□□□ 0.94
SPAST-203ENST00000615843 PARP2Q9UGN5 583 aa20.9■□□□□ 0.94
SPAST-203ENST00000615843 KRT15P19012 456 aa20.9■□□□□ 0.94
SPAST-203ENST00000615843 LSG1Q9H089 658 aaKnown RBP20.9■□□□□ 0.94
SPAST-203ENST00000615843 AKNAD1Q5T1N1 836 aa20.9■□□□□ 0.94
SPAST-203ENST00000615843 SEPT14Q6ZU15 432 aa20.9■□□□□ 0.94
SPAST-203ENST00000615843 DNM2P50570 870 aa20.9■□□□□ 0.94
SPAST-203ENST00000615843 NOSTRINQ8IVI9 506 aa20.9■□□□□ 0.94
SPAST-203ENST00000615843 RASEFQ8IZ41 740 aa20.9■□□□□ 0.94
SPAST-203ENST00000615843 EDC3Q96F86 508 aaKnown RBP20.9■□□□□ 0.94
SPAST-203ENST00000615843 PNMA6AP0CW24 399 aaPredicted RBP20.89■□□□□ 0.94
SPAST-203ENST00000615843 DYMQ7RTS9 669 aa20.89■□□□□ 0.94
SPAST-203ENST00000615843 PARD6BQ9BYG5 372 aa20.89■□□□□ 0.94
SPAST-203ENST00000615843 SHANK2Q9UPX8 1470 aa20.89■□□□□ 0.93
SPAST-203ENST00000615843 ZNF853P0CG23 659 aa20.89■□□□□ 0.93
SPAST-203ENST00000615843 KRT5P13647 590 aa20.89■□□□□ 0.93
SPAST-203ENST00000615843 ANKRD20A3Q5VUR7 823 aa20.89■□□□□ 0.93
SPAST-203ENST00000615843 KCTD16Q68DU8 428 aa20.89■□□□□ 0.93
SPAST-203ENST00000615843 NBPF5PQ86XG9 351 aaPredicted RBP20.89■□□□□ 0.93
SPAST-203ENST00000615843 TBC1D31Q96DN5 1066 aa20.89■□□□□ 0.93
SPAST-203ENST00000615843 TCHPQ9BT92 498 aa20.89■□□□□ 0.93
SPAST-203ENST00000615843 LRWD1Q9UFC0 647 aa20.89■□□□□ 0.93
SPAST-203ENST00000615843 ARL1P40616 181 aaPredicted RBP20.89■□□□□ 0.93
SPAST-203ENST00000615843 TXNDC9O14530 226 aa20.89■□□□□ 0.93
SPAST-203ENST00000615843 KCNK3O14649 394 aa20.89■□□□□ 0.93
SPAST-203ENST00000615843 SDCCAG8Q86SQ7 713 aaPredicted RBP20.89■□□□□ 0.93
SPAST-203ENST00000615843 CASQ2O14958 399 aaPredicted RBP20.88■□□□□ 0.93
SPAST-203ENST00000615843 HOXC9P31274 260 aa20.88■□□□□ 0.93
SPAST-203ENST00000615843 CTDSPL2Q05D32 466 aa20.88■□□□□ 0.93
SPAST-203ENST00000615843 IFT88Q13099 833 aa20.88■□□□□ 0.93
SPAST-203ENST00000615843 DPCR1Q3MIW9 517 aa20.88■□□□□ 0.93
SPAST-203ENST00000615843 MSANTD4Q8NCY6 345 aa20.88■□□□□ 0.93
SPAST-203ENST00000615843 PPP1R1BQ9UD71 204 aaPredicted RBP20.88■□□□□ 0.93
SPAST-203ENST00000615843 CLIC4Q9Y696 253 aa20.88■□□□□ 0.93
SPAST-203ENST00000615843 GOLGA8FQ08AF8 430 aa20.88■□□□□ 0.93
SPAST-203ENST00000615843 GOLGA8DPQ0D2H9 430 aa20.88■□□□□ 0.93
SPAST-203ENST00000615843 PLCH2O75038 1416 aa20.88■□□□□ 0.93
SPAST-203ENST00000615843 ATP10BO94823 1461 aa20.88■□□□□ 0.93
SPAST-203ENST00000615843 FRMD3A2A2Y4 597 aa20.88■□□□□ 0.93
SPAST-203ENST00000615843 CABP7Q86V35 215 aa20.88■□□□□ 0.93
SPAST-203ENST00000615843 RPUSD2Q8IZ73 545 aaKnown RBP20.88■□□□□ 0.93
SPAST-203ENST00000615843 HINFPQ9BQA5 517 aa20.88■□□□□ 0.93
SPAST-203ENST00000615843 VPS54Q9P1Q0 977 aa20.88■□□□□ 0.93
SPAST-203ENST00000615843 ABCC2Q92887 1545 aa20.87■□□□□ 0.93
SPAST-203ENST00000615843 KRIT1O00522 736 aa20.87■□□□□ 0.93
SPAST-203ENST00000615843 HERC4Q5GLZ8 1057 aaPredicted RBP20.87■□□□□ 0.93
SPAST-203ENST00000615843 CEP120Q8N960 986 aa20.87■□□□□ 0.93
SPAST-203ENST00000615843 SNX29Q8TEQ0 813 aa20.87■□□□□ 0.93
SPAST-203ENST00000615843 USP44Q9H0E7 712 aa20.87■□□□□ 0.93
SPAST-203ENST00000615843 RTEL1Q9NZ71 1219 aa20.87■□□□□ 0.93
SPAST-203ENST00000615843 MYO1AQ9UBC5 1043 aa20.87■□□□□ 0.93
SPAST-203ENST00000615843 IKBKBO14920 756 aa20.87■□□□□ 0.93
SPAST-203ENST00000615843 MRPL12P52815 198 aaKnown RBP20.87■□□□□ 0.93
SPAST-203ENST00000615843 PLBD2Q8NHP8 589 aa20.87■□□□□ 0.93
SPAST-203ENST00000615843 AMFRQ9UKV5 643 aa20.87■□□□□ 0.93
SPAST-203ENST00000615843 ADCK5Q3MIX3 580 aa20.87■□□□□ 0.93
SPAST-203ENST00000615843 FAM184BQ9ULE4 1060 aa20.87■□□□□ 0.93
SPAST-203ENST00000615843 AGTPBP1Q9UPW5 1226 aa20.87■□□□□ 0.93
SPAST-203ENST00000615843 PRDM1O75626 825 aa20.87■□□□□ 0.93
SPAST-203ENST00000615843 LUC7L3O95232 432 aaKnown RBP20.87■□□□□ 0.93
SPAST-203ENST00000615843 CASP14P31944 242 aa20.87■□□□□ 0.93
SPAST-203ENST00000615843 CLIC6Q96NY7 704 aa20.87■□□□□ 0.93
SPAST-203ENST00000615843 DENND4BO75064 1496 aaPredicted RBP20.87■□□□□ 0.93
SPAST-203ENST00000615843 BUB1O43683 1085 aa20.86■□□□□ 0.93
SPAST-203ENST00000615843 NONOQ15233 471 aaKnown RBP eCLIP20.86■□□□□ 0.93
SPAST-203ENST00000615843 ZNF594Q96JF6 807 aaPredicted RBP20.86■□□□□ 0.93
SPAST-203ENST00000615843 NIP7Q9Y221 180 aaKnown RBP eCLIP20.86■□□□□ 0.93
SPAST-203ENST00000615843 ZNF521Q96K83 1311 aa20.86■□□□□ 0.93
SPAST-203ENST00000615843 SBNO1A3KN83 1393 aa20.86■□□□□ 0.93
SPAST-203ENST00000615843 NDC80O14777 642 aa20.86■□□□□ 0.93
SPAST-203ENST00000615843 HAUS3Q68CZ6 603 aa20.86■□□□□ 0.93
SPAST-203ENST00000615843 MAK16Q9BXY0 300 aaKnown RBP20.86■□□□□ 0.93
SPAST-203ENST00000615843 OSBPL3Q9H4L5 887 aa20.86■□□□□ 0.93
SPAST-203ENST00000615843 PTPRTO14522 1441 aa20.86■□□□□ 0.93
SPAST-203ENST00000615843 CCDC14Q49A88 953 aa20.86■□□□□ 0.93
SPAST-203ENST00000615843 STAG1Q8WVM7 1258 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms