RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 ATP2B2Q01814 1243 aa8.63□□□□□ -1.03
MUC1-227ENST00000615517 RALBP1Q15311 655 aa8.63□□□□□ -1.03
MUC1-227ENST00000615517 PUM3Q15397 648 aaKnown RBP8.63□□□□□ -1.03
MUC1-227ENST00000615517 SHROOM1Q2M3G4 852 aaPredicted RBP8.63□□□□□ -1.03
MUC1-227ENST00000615517 CCAR1Q8IX12 1150 aaKnown RBP8.63□□□□□ -1.03
MUC1-227ENST00000615517 ANKRD44Q8N8A2 993 aa8.63□□□□□ -1.03
MUC1-227ENST00000615517 WDR18Q9BV38 432 aa8.63□□□□□ -1.03
MUC1-227ENST00000615517 CFAP54Q96N23 3096 aa8.62□□□□□ -1.03
MUC1-227ENST00000615517 TLL1O43897 1013 aa8.62□□□□□ -1.03
MUC1-227ENST00000615517 NBPF7P0C2Y1 421 aaPredicted RBP8.62□□□□□ -1.03
MUC1-227ENST00000615517 BTDP43251 543 aa8.62□□□□□ -1.03
MUC1-227ENST00000615517 GRB14Q14449 540 aa8.62□□□□□ -1.03
MUC1-227ENST00000615517 RABL6Q3YEC7 729 aaPredicted RBP8.62□□□□□ -1.03
MUC1-227ENST00000615517 TMEM240Q5SV17 173 aa8.62□□□□□ -1.03
MUC1-227ENST00000615517 CCDC129Q6ZRS4 1044 aa8.62□□□□□ -1.03
MUC1-227ENST00000615517 NKX2-4Q9H2Z4 354 aa8.62□□□□□ -1.03
MUC1-227ENST00000615517 BICC1Q9H694 974 aaKnown RBP8.62□□□□□ -1.03
MUC1-227ENST00000615517 AS3MTQ9HBK9 375 aa8.62□□□□□ -1.03
MUC1-227ENST00000615517 C9orf78Q9NZ63 289 aaPredicted RBP8.62□□□□□ -1.03
MUC1-227ENST00000615517 TMOD4Q9NZQ9 345 aa8.62□□□□□ -1.03
MUC1-227ENST00000615517 PHF24Q9UPV7 400 aa8.62□□□□□ -1.03
MUC1-227ENST00000615517 SMIM22K7EJ46 135 aa8.61□□□□□ -1.03
MUC1-227ENST00000615517 ERC2O15083 957 aa8.61□□□□□ -1.03
MUC1-227ENST00000615517 SEPT4O43236 478 aa8.61□□□□□ -1.03
MUC1-227ENST00000615517 PQBP1O60828 265 aaKnown RBP8.61□□□□□ -1.03
MUC1-227ENST00000615517 NHLH1Q02575 133 aa8.61□□□□□ -1.03
MUC1-227ENST00000615517 FAAP100Q0VG06 881 aa8.61□□□□□ -1.03
MUC1-227ENST00000615517 FAM47AQ5JRC9 791 aa8.61□□□□□ -1.03
MUC1-227ENST00000615517 PRAMEF19Q5SWL8 479 aa8.61□□□□□ -1.03
MUC1-227ENST00000615517 MICALL1Q8N3F8 863 aa8.61□□□□□ -1.03
MUC1-227ENST00000615517 ZNF384Q8TF68 577 aa8.61□□□□□ -1.03
MUC1-227ENST00000615517 FAM163AQ96GL9 167 aaPredicted RBP8.61□□□□□ -1.03
MUC1-227ENST00000615517 TSPYL2Q9H2G4 693 aaPredicted RBP8.61□□□□□ -1.03
MUC1-227ENST00000615517 CD320Q9NPF0 282 aa8.61□□□□□ -1.03
MUC1-227ENST00000615517 EMILIN3Q9NT22 766 aa8.61□□□□□ -1.03
MUC1-227ENST00000615517 TMEM39AQ9NV64 488 aa8.61□□□□□ -1.03
MUC1-227ENST00000615517 YBX2Q9Y2T7 364 aaKnown RBP8.61□□□□□ -1.03
MUC1-227ENST00000615517 RABGAP1Q9Y3P9 1069 aa8.61□□□□□ -1.03
MUC1-227ENST00000615517 A0A0G2JMZ2 1700 aa8.6□□□□□ -1.03
MUC1-227ENST00000615517 MYO5AQ9Y4I1 1855 aaKnown RBP8.6□□□□□ -1.03
MUC1-227ENST00000615517 C19orf81C9J6K1 198 aa8.6□□□□□ -1.03
MUC1-227ENST00000615517 PI4K2BG5E9Z4 385 aa8.6□□□□□ -1.03
MUC1-227ENST00000615517 ALDH1L1O75891 902 aa8.6□□□□□ -1.03
MUC1-227ENST00000615517 GLRX3O76003 335 aaKnown RBP8.6□□□□□ -1.03
MUC1-227ENST00000615517 TIMP1P01033 207 aa8.6□□□□□ -1.03
MUC1-227ENST00000615517 ATXN8OSP0DMR3 200 aa8.6□□□□□ -1.03
MUC1-227ENST00000615517 SLC5A1P13866 664 aa8.6□□□□□ -1.03
MUC1-227ENST00000615517 AAK1Q2M2I8 961 aa8.6□□□□□ -1.03
MUC1-227ENST00000615517 WDR78Q5VTH9 848 aa8.6□□□□□ -1.03
MUC1-227ENST00000615517 SLC44A5Q8NCS7 719 aa8.6□□□□□ -1.03
MUC1-227ENST00000615517 GTF3C2Q8WUA4 911 aaPredicted RBP8.6□□□□□ -1.03
MUC1-227ENST00000615517 LPIN2Q92539 896 aa8.6□□□□□ -1.03
MUC1-227ENST00000615517 CWC22Q9HCG8 908 aaKnown RBP8.6□□□□□ -1.03
MUC1-227ENST00000615517 BTBD7Q9P203 1132 aa8.6□□□□□ -1.03
MUC1-227ENST00000615517 MYH1P12882 1939 aa8.6□□□□□ -1.03
MUC1-227ENST00000615517 TRIOO75962 3097 aa8.6□□□□□ -1.03
MUC1-227ENST00000615517 COL11A1P12107 1806 aaPredicted RBP8.59□□□□□ -1.03
MUC1-227ENST00000615517 PARP14Q460N5 1801 aa8.59□□□□□ -1.03
MUC1-227ENST00000615517 MROH7-TTC4A0A0A0MT08 1334 aa8.59□□□□□ -1.03
MUC1-227ENST00000615517 MCM3APO60318 1980 aa8.59□□□□□ -1.03
MUC1-227ENST00000615517 GPR75-ASB3A0A0A6YYF3 556 aa8.59□□□□□ -1.03
MUC1-227ENST00000615517 A0A1W2PQ45 241 aaPredicted RBP8.59□□□□□ -1.03
MUC1-227ENST00000615517 A0A1W2PQY0 241 aa8.59□□□□□ -1.03
MUC1-227ENST00000615517 USP17L10C9JJH3 530 aa8.59□□□□□ -1.03
MUC1-227ENST00000615517 VAMP4O75379 141 aa8.59□□□□□ -1.03
MUC1-227ENST00000615517 ACRP10323 421 aa8.59□□□□□ -1.03
MUC1-227ENST00000615517 PHKA1P46020 1223 aa8.59□□□□□ -1.03
MUC1-227ENST00000615517 OLFML2BQ68BL8 750 aa8.59□□□□□ -1.03
MUC1-227ENST00000615517 MFSD5Q6N075 450 aa8.59□□□□□ -1.03
MUC1-227ENST00000615517 ZNF365Q70YC5 407 aa8.59□□□□□ -1.03
MUC1-227ENST00000615517 ANKRD33Q7Z3H0 272 aa8.59□□□□□ -1.03
MUC1-227ENST00000615517 DNAJC18Q9H819 358 aa8.59□□□□□ -1.03
MUC1-227ENST00000615517 MSRAQ9UJ68 235 aa8.59□□□□□ -1.03
MUC1-227ENST00000615517 TBX21Q9UL17 535 aa8.59□□□□□ -1.03
MUC1-227ENST00000615517 PRR33A8MZF0 331 aa8.58□□□□□ -1.04
MUC1-227ENST00000615517 RFXAPO00287 272 aa8.58□□□□□ -1.04
MUC1-227ENST00000615517 COBLO75128 1261 aa8.58□□□□□ -1.04
MUC1-227ENST00000615517 ASNSP08243 561 aa8.58□□□□□ -1.04
MUC1-227ENST00000615517 CSF2RAP15509 400 aa8.58□□□□□ -1.04
MUC1-227ENST00000615517 RFX5P48382 616 aaPredicted RBP8.58□□□□□ -1.04
MUC1-227ENST00000615517 CCNA1P78396 465 aa8.58□□□□□ -1.04
MUC1-227ENST00000615517 RAB30Q15771 203 aa8.58□□□□□ -1.04
MUC1-227ENST00000615517 ATG9AQ7Z3C6 839 aa8.58□□□□□ -1.04
MUC1-227ENST00000615517 DZIP1Q86YF9 867 aaKnown RBP8.58□□□□□ -1.04
MUC1-227ENST00000615517 HERVK_113Q902F9 699 aa8.58□□□□□ -1.04
MUC1-227ENST00000615517 TOX2Q96NM4 488 aa8.58□□□□□ -1.04
MUC1-227ENST00000615517 SLC28A3Q9HAS3 691 aa8.58□□□□□ -1.04
MUC1-227ENST00000615517 DENND2AQ9ULE3 1009 aa8.58□□□□□ -1.04
MUC1-227ENST00000615517 SCN5AQ14524 2016 aa8.58□□□□□ -1.04
MUC1-227ENST00000615517 COL4A4P53420 1690 aaPredicted RBP8.57□□□□□ -1.04
MUC1-227ENST00000615517 EYA2O00167 538 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 SEMA3EO15041 775 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 GDF11O95390 407 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 PGK1P00558 417 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 MYOGP15173 224 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 ADORA2AP29274 412 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 RABGGTBP53611 331 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 MECOMQ03112 1051 aa8.57□□□□□ -1.04
MUC1-227ENST00000615517 PPIGQ13427 754 aaKnown RBP eCLIP8.57□□□□□ -1.04
MUC1-227ENST00000615517 SKIV2LQ15477 1246 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms