RNA–Protein interactions for RNA: ENST00000613941.4

SRSF3-204, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 4

Gene SRSF3, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-204ENST00000613941 PQBP1O60828 265 aaKnown RBP13.09□□□□□ -0.31
SRSF3-204ENST00000613941 GDF11O95390 407 aa13.09□□□□□ -0.31
SRSF3-204ENST00000613941 BMP1P13497 986 aa13.09□□□□□ -0.31
SRSF3-204ENST00000613941 LRRC41Q15345 812 aa13.09□□□□□ -0.31
SRSF3-204ENST00000613941 ZYXQ15942 572 aaKnown RBP13.09□□□□□ -0.31
SRSF3-204ENST00000613941 FAM47AQ5JRC9 791 aa13.09□□□□□ -0.31
SRSF3-204ENST00000613941 ZNF384Q8TF68 577 aa13.09□□□□□ -0.31
SRSF3-204ENST00000613941 SNX27Q96L92 541 aa13.09□□□□□ -0.31
SRSF3-204ENST00000613941 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.09□□□□□ -0.315e-7■□□□□ 11.2
SRSF3-204ENST00000613941 SIL1Q9H173 461 aa13.09□□□□□ -0.31
SRSF3-204ENST00000613941 TACC3Q9Y6A5 838 aa13.09□□□□□ -0.31
SRSF3-204ENST00000613941 MYH8P13535 1937 aa13.09□□□□□ -0.31
SRSF3-204ENST00000613941 MCM3APO60318 1980 aa13.09□□□□□ -0.31
SRSF3-204ENST00000613941 GLRX3O76003 335 aaKnown RBP13.08□□□□□ -0.32
SRSF3-204ENST00000613941 ADORA1P30542 326 aa13.08□□□□□ -0.32
SRSF3-204ENST00000613941 RFX5P48382 616 aaPredicted RBP13.08□□□□□ -0.32
SRSF3-204ENST00000613941 GRB14Q14449 540 aa13.08□□□□□ -0.32
SRSF3-204ENST00000613941 TMEM31Q5JXX7 168 aa13.08□□□□□ -0.32
SRSF3-204ENST00000613941 PRAMEF19Q5SWL8 479 aa13.08□□□□□ -0.32
SRSF3-204ENST00000613941 ATG9AQ7Z3C6 839 aa13.08□□□□□ -0.32
SRSF3-204ENST00000613941 ZGPATQ8N5A5 531 aaKnown RBP13.08□□□□□ -0.32
SRSF3-204ENST00000613941 GTF3C2Q8WUA4 911 aaPredicted RBP13.08□□□□□ -0.32
SRSF3-204ENST00000613941 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.32
SRSF3-204ENST00000613941 IVNS1ABPQ9Y6Y0 642 aa13.08□□□□□ -0.32
SRSF3-204ENST00000613941 WDFY4Q6ZS81 3184 aa13.07□□□□□ -0.32
SRSF3-204ENST00000613941 GPR75-ASB3A0A0A6YYF3 556 aa13.07□□□□□ -0.32
SRSF3-204ENST00000613941 C19orf81C9J6K1 198 aa13.07□□□□□ -0.32
SRSF3-204ENST00000613941 KIAA0355O15063 1070 aa13.07□□□□□ -0.32
SRSF3-204ENST00000613941 SEPT4O43236 478 aa13.07□□□□□ -0.32
SRSF3-204ENST00000613941 ASNSP08243 561 aa13.07□□□□□ -0.32
SRSF3-204ENST00000613941 HOXC6P09630 235 aa13.07□□□□□ -0.32
SRSF3-204ENST00000613941 CCNA1P78396 465 aa13.07□□□□□ -0.32
SRSF3-204ENST00000613941 MECOMQ03112 1051 aa13.07□□□□□ -0.32
SRSF3-204ENST00000613941 RASGRF1Q13972 1273 aa13.07□□□□□ -0.32
SRSF3-204ENST00000613941 C1orf53Q5VUE5 145 aa13.07□□□□□ -0.32
SRSF3-204ENST00000613941 SLF2Q8IX21 1173 aa13.07□□□□□ -0.32
SRSF3-204ENST00000613941 FAM163AQ96GL9 167 aaPredicted RBP13.07□□□□□ -0.32
SRSF3-204ENST00000613941 DNAJC18Q9H819 358 aa13.07□□□□□ -0.32
SRSF3-204ENST00000613941 TMEM39AQ9NV64 488 aa13.07□□□□□ -0.32
SRSF3-204ENST00000613941 CXXC1Q9P0U4 656 aaPredicted RBP13.07□□□□□ -0.32
SRSF3-204ENST00000613941 BTBD7Q9P203 1132 aa13.07□□□□□ -0.32
SRSF3-204ENST00000613941 RABGAP1Q9Y3P9 1069 aa13.07□□□□□ -0.32
SRSF3-204ENST00000613941 COL4A4P53420 1690 aaPredicted RBP13.06□□□□□ -0.32
SRSF3-204ENST00000613941 SEMA3EO15041 775 aa13.06□□□□□ -0.32
SRSF3-204ENST00000613941 IGHA2P01877 340 aa13.06□□□□□ -0.32
SRSF3-204ENST00000613941 DDX10Q13206 875 aaKnown RBP13.06□□□□□ -0.32
SRSF3-204ENST00000613941 CCDC102BQ68D86 513 aa13.06□□□□□ -0.32
SRSF3-204ENST00000613941 KHSRPQ92945 711 aaKnown RBP eCLIP13.06□□□□□ -0.323e-6■□□□□ 8.3
SRSF3-204ENST00000613941 NKX2-4Q9H2Z4 354 aa13.06□□□□□ -0.32
SRSF3-204ENST00000613941 C11orf16Q9NQ32 467 aa13.06□□□□□ -0.32
SRSF3-204ENST00000613941 HERC5Q9UII4 1024 aaKnown RBP13.06□□□□□ -0.32
SRSF3-204ENST00000613941 ZBTB21Q9ULJ3 1066 aa13.06□□□□□ -0.32
SRSF3-204ENST00000613941 IL16Q14005 1332 aa13.06□□□□□ -0.32
SRSF3-204ENST00000613941 BRWD1Q9NSI6 2320 aa13.06□□□□□ -0.32
SRSF3-204ENST00000613941 NPM3O75607 178 aaKnown RBP13.05□□□□□ -0.32
SRSF3-204ENST00000613941 CCDC27Q2M243 656 aa13.05□□□□□ -0.32
SRSF3-204ENST00000613941 DPP9Q86TI2 863 aa13.05□□□□□ -0.32
SRSF3-204ENST00000613941 TEX11Q8IYF3 940 aa13.05□□□□□ -0.32
SRSF3-204ENST00000613941 A0A1W2PQ45 241 aaPredicted RBP13.04□□□□□ -0.32
SRSF3-204ENST00000613941 A0A1W2PQY0 241 aa13.04□□□□□ -0.32
SRSF3-204ENST00000613941 ADORA2AP29274 412 aa13.04□□□□□ -0.32
SRSF3-204ENST00000613941 FAAP100Q0VG06 881 aa13.04□□□□□ -0.32
SRSF3-204ENST00000613941 TMEM240Q5SV17 173 aa13.04□□□□□ -0.32
SRSF3-204ENST00000613941 USP17L2Q6R6M4 530 aa13.04□□□□□ -0.32
SRSF3-204ENST00000613941 ERICH6Q7L0X2 663 aa13.04□□□□□ -0.32
SRSF3-204ENST00000613941 C16orf59Q7L2K0 433 aa13.04□□□□□ -0.32
SRSF3-204ENST00000613941 SLC44A5Q8NCS7 719 aa13.04□□□□□ -0.32
SRSF3-204ENST00000613941 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
SRSF3-204ENST00000613941 PHF24Q9UPV7 400 aa13.04□□□□□ -0.32
SRSF3-204ENST00000613941 PGK1P00558 417 aa13.03□□□□□ -0.32
SRSF3-204ENST00000613941 ACRP10323 421 aa13.03□□□□□ -0.32
SRSF3-204ENST00000613941 SKIV2LQ15477 1246 aaKnown RBP13.03□□□□□ -0.32
SRSF3-204ENST00000613941 OLFML2BQ68BL8 750 aa13.03□□□□□ -0.32
SRSF3-204ENST00000613941 SPTY2D1Q68D10 685 aaPredicted RBP13.03□□□□□ -0.32
SRSF3-204ENST00000613941 SH3RF3Q8TEJ3 882 aaPredicted RBP13.03□□□□□ -0.32
SRSF3-204ENST00000613941 LENG1Q96BZ8 264 aaPredicted RBP13.03□□□□□ -0.32
SRSF3-204ENST00000613941 FEZ1Q99689 392 aa13.03□□□□□ -0.32
SRSF3-204ENST00000613941 XPNPEP3Q9NQH7 507 aa13.03□□□□□ -0.32
SRSF3-204ENST00000613941 CEP126Q9P2H0 1117 aa13.03□□□□□ -0.32
SRSF3-204ENST00000613941 PI4KBQ9UBF8 816 aa13.03□□□□□ -0.32
SRSF3-204ENST00000613941 SALL2Q9Y467 1007 aaPredicted RBP13.03□□□□□ -0.32
SRSF3-204ENST00000613941 SCN5AQ14524 2016 aa13.03□□□□□ -0.32
SRSF3-204ENST00000613941 SPDYE16A6NNV3 312 aaPredicted RBP13.02□□□□□ -0.33
SRSF3-204ENST00000613941 USP17L15C9J2P7 530 aa13.02□□□□□ -0.33
SRSF3-204ENST00000613941 USP17L13C9JLJ4 530 aa13.02□□□□□ -0.33
SRSF3-204ENST00000613941 USP17L11C9JVI0 530 aa13.02□□□□□ -0.33
SRSF3-204ENST00000613941 USP17L18D6R9N7 530 aa13.02□□□□□ -0.33
SRSF3-204ENST00000613941 USP17L22D6RA61 530 aa13.02□□□□□ -0.33
SRSF3-204ENST00000613941 USP17L17D6RBQ6 530 aa13.02□□□□□ -0.33
SRSF3-204ENST00000613941 USP17L19D6RCP7 530 aa13.02□□□□□ -0.33
SRSF3-204ENST00000613941 USP17L20D6RJB6 530 aa13.02□□□□□ -0.33
SRSF3-204ENST00000613941 COBLO75128 1261 aa13.02□□□□□ -0.33
SRSF3-204ENST00000613941 MRE11P49959 708 aa13.02□□□□□ -0.33
SRSF3-204ENST00000613941 USP17L24Q0WX57 530 aa13.02□□□□□ -0.33
SRSF3-204ENST00000613941 PI16Q6UXB8 463 aa13.02□□□□□ -0.33
SRSF3-204ENST00000613941 TBC1D9Q6ZT07 1266 aa13.02□□□□□ -0.33
SRSF3-204ENST00000613941 CRACR2BQ8N4Y2 399 aaPredicted RBP13.02□□□□□ -0.33
SRSF3-204ENST00000613941 YBX2Q9Y2T7 364 aaKnown RBP13.02□□□□□ -0.33
SRSF3-204ENST00000613941 NAV1Q8NEY1 1877 aa13.02□□□□□ -0.33
SRSF3-204ENST00000613941 APBB1O00213 710 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms