RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 PRKRIP1Q9H875 184 aaPredicted RBP12.77□□□□□ -0.37
SSX3-204ENST00000612497 RABGAP1Q9Y3P9 1069 aa12.77□□□□□ -0.37
SSX3-204ENST00000612497 HOXC6P09630 235 aa12.76□□□□□ -0.37
SSX3-204ENST00000612497 JAG1P78504 1218 aa12.76□□□□□ -0.37
SSX3-204ENST00000612497 C1orf53Q5VUE5 145 aa12.76□□□□□ -0.37
SSX3-204ENST00000612497 EMILIN3Q9NT22 766 aa12.76□□□□□ -0.37
SSX3-204ENST00000612497 PI4KBQ9UBF8 816 aa12.76□□□□□ -0.37
SSX3-204ENST00000612497 ARIH1Q9Y4X5 557 aaPredicted RBP12.76□□□□□ -0.37
SSX3-204ENST00000612497 SMCHD1A6NHR9 2005 aa12.75□□□□□ -0.37
SSX3-204ENST00000612497 SEPT4O43236 478 aa12.75□□□□□ -0.37
SSX3-204ENST00000612497 CNMDO75829 334 aa12.75□□□□□ -0.37
SSX3-204ENST00000612497 GDF11O95390 407 aa12.75□□□□□ -0.37
SSX3-204ENST00000612497 MAP4K4O95819 1239 aaPredicted RBP12.75□□□□□ -0.37
SSX3-204ENST00000612497 LDHCP07864 332 aa12.75□□□□□ -0.37
SSX3-204ENST00000612497 IGFBP4P22692 258 aa12.75□□□□□ -0.37
SSX3-204ENST00000612497 GRB14Q14449 540 aa12.75□□□□□ -0.37
SSX3-204ENST00000612497 SHROOM1Q2M3G4 852 aaPredicted RBP12.75□□□□□ -0.37
SSX3-204ENST00000612497 USP17L2Q6R6M4 530 aa12.75□□□□□ -0.37
SSX3-204ENST00000612497 CCDC129Q6ZRS4 1044 aa12.75□□□□□ -0.37
SSX3-204ENST00000612497 DPP9Q86TI2 863 aa12.75□□□□□ -0.37
SSX3-204ENST00000612497 TEX11Q8IYF3 940 aa12.75□□□□□ -0.37
SSX3-204ENST00000612497 TRIM34Q9BYJ4 488 aa12.75□□□□□ -0.37
SSX3-204ENST00000612497 SALL2Q9Y467 1007 aaPredicted RBP12.75□□□□□ -0.37
SSX3-204ENST00000612497 CHD9Q3L8U1 2897 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 USP17L15C9J2P7 530 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 USP17L13C9JLJ4 530 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 USP17L11C9JVI0 530 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 USP17L18D6R9N7 530 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 USP17L22D6RA61 530 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 USP17L17D6RBQ6 530 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 USP17L19D6RCP7 530 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 USP17L20D6RJB6 530 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 KIAA0355O15063 1070 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 PQBP1O60828 265 aaKnown RBP12.74□□□□□ -0.37
SSX3-204ENST00000612497 CIAO1O76071 339 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 GSTO1P78417 241 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 USP17L24Q0WX57 530 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 LRRC41Q15345 812 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 ZYXQ15942 572 aaKnown RBP12.74□□□□□ -0.37
SSX3-204ENST00000612497 WDR63Q8IWG1 891 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 CRACR2BQ8N4Y2 399 aaPredicted RBP12.74□□□□□ -0.37
SSX3-204ENST00000612497 ZNF384Q8TF68 577 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 USP44Q9H0E7 712 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 TSPYL2Q9H2G4 693 aaPredicted RBP12.74□□□□□ -0.37
SSX3-204ENST00000612497 TMEM39AQ9NV64 488 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 PIEZO1Q92508 2521 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 REV3LO60673 3130 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 SIPA1L1O43166 1804 aa12.74□□□□□ -0.37
SSX3-204ENST00000612497 PDS5AQ29RF7 1337 aaKnown RBP12.73□□□□□ -0.37
SSX3-204ENST00000612497 GRXCR1A8MXD5 290 aa12.73□□□□□ -0.37
SSX3-204ENST00000612497 PBX2P40425 430 aa12.73□□□□□ -0.37
SSX3-204ENST00000612497 ADGRE1Q14246 886 aa12.73□□□□□ -0.37
SSX3-204ENST00000612497 PRAMEF19Q5SWL8 479 aa12.73□□□□□ -0.37
SSX3-204ENST00000612497 OLFML2BQ68BL8 750 aa12.73□□□□□ -0.37
SSX3-204ENST00000612497 FEZ1Q99689 392 aa12.73□□□□□ -0.37
SSX3-204ENST00000612497 LRFN3Q9BTN0 628 aa12.73□□□□□ -0.37
SSX3-204ENST00000612497 PBX4Q9BYU1 374 aa12.73□□□□□ -0.37
SSX3-204ENST00000612497 DHX36Q9H2U1 1008 aaKnown RBP12.73□□□□□ -0.37
SSX3-204ENST00000612497 FBXO3Q9UK99 471 aa12.73□□□□□ -0.37
SSX3-204ENST00000612497 ZBTB21Q9ULJ3 1066 aa12.73□□□□□ -0.37
SSX3-204ENST00000612497 CDK5RAP2Q96SN8 1893 aa12.72□□□□□ -0.37
SSX3-204ENST00000612497 ZBTB22O15209 634 aa12.72□□□□□ -0.37
SSX3-204ENST00000612497 IGHA2P01877 340 aa12.72□□□□□ -0.37
SSX3-204ENST00000612497 TIMM10P62072 90 aa12.72□□□□□ -0.37
SSX3-204ENST00000612497 FAM47AQ5JRC9 791 aa12.72□□□□□ -0.37
SSX3-204ENST00000612497 FOXP4Q8IVH2 680 aaPredicted RBP12.72□□□□□ -0.37
SSX3-204ENST00000612497 SH3RF3Q8TEJ3 882 aaPredicted RBP12.72□□□□□ -0.37
SSX3-204ENST00000612497 NOL10Q9BSC4 688 aaKnown RBP12.72□□□□□ -0.37
SSX3-204ENST00000612497 GINM1Q9NU53 330 aa12.72□□□□□ -0.37
SSX3-204ENST00000612497 RAI14Q9P0K7 980 aa12.72□□□□□ -0.37
SSX3-204ENST00000612497 BTBD7Q9P203 1132 aa12.72□□□□□ -0.37
SSX3-204ENST00000612497 BMP1P13497 986 aa12.71□□□□□ -0.37
SSX3-204ENST00000612497 ADORA2AP29274 412 aa12.71□□□□□ -0.37
SSX3-204ENST00000612497 IL15P40933 162 aaPredicted RBP12.71□□□□□ -0.37
SSX3-204ENST00000612497 CATSPERGQ6ZRH7 1159 aa12.71□□□□□ -0.37
SSX3-204ENST00000612497 TBC1D9Q6ZT07 1266 aa12.71□□□□□ -0.37
SSX3-204ENST00000612497 SLC44A5Q8NCS7 719 aa12.71□□□□□ -0.37
SSX3-204ENST00000612497 NSUN4Q96CB9 384 aaKnown RBP12.71□□□□□ -0.37
SSX3-204ENST00000612497 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.71□□□□□ -0.374e-6■■□□□ 12.7
SSX3-204ENST00000612497 EPHX3Q9H6B9 360 aa12.71□□□□□ -0.37
SSX3-204ENST00000612497 DNAJC18Q9H819 358 aa12.71□□□□□ -0.37
SSX3-204ENST00000612497 CXXC1Q9P0U4 656 aaPredicted RBP12.71□□□□□ -0.37
SSX3-204ENST00000612497 PHF24Q9UPV7 400 aa12.71□□□□□ -0.37
SSX3-204ENST00000612497 MUC6Q6W4X9 2439 aa12.71□□□□□ -0.38
SSX3-204ENST00000612497 CHD7Q9P2D1 2997 aa12.71□□□□□ -0.38
SSX3-204ENST00000612497 AAK1Q2M2I8 961 aa12.7□□□□□ -0.38
SSX3-204ENST00000612497 TMEM31Q5JXX7 168 aa12.7□□□□□ -0.38
SSX3-204ENST00000612497 MAPKAPK5Q8IW41 473 aa12.7□□□□□ -0.38
SSX3-204ENST00000612497 C12orf42Q96LP6 360 aa12.7□□□□□ -0.38
SSX3-204ENST00000612497 XPNPEP3Q9NQH7 507 aa12.7□□□□□ -0.38
SSX3-204ENST00000612497 MSRAQ9UJ68 235 aa12.7□□□□□ -0.38
SSX3-204ENST00000612497 PALD1Q9ULE6 856 aa12.7□□□□□ -0.38
SSX3-204ENST00000612497 XIRP2A4UGR9 3374 aa12.7□□□□□ -0.38
SSX3-204ENST00000612497 ZNFX1Q9P2E3 1918 aaKnown RBP12.69□□□□□ -0.38
SSX3-204ENST00000612497 DCDC2CA8MYV0 355 aa12.69□□□□□ -0.38
SSX3-204ENST00000612497 STRNO43815 780 aa12.69□□□□□ -0.38
SSX3-204ENST00000612497 TIMP1P01033 207 aa12.69□□□□□ -0.38
SSX3-204ENST00000612497 GH2P01242 217 aa12.69□□□□□ -0.38
SSX3-204ENST00000612497 RARBP10826 455 aa12.69□□□□□ -0.38
SSX3-204ENST00000612497 TFF2Q03403 129 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms