RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 RBM43Q6ZSC3 357 aaKnown RBP9.81□□□□□ -0.84
LIG4-204ENST00000611712 SLF2Q8IX21 1173 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 TSG101Q99816 390 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 RHOXF2Q9BQY4 288 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 OSBPL5Q9H0X9 879 aaPredicted RBP9.81□□□□□ -0.84
LIG4-204ENST00000611712 SAP30BPQ9UHR5 308 aaKnown RBP9.81□□□□□ -0.84
LIG4-204ENST00000611712 GNPATO15228 680 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 KRT9P35527 623 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 CYLC1P35663 651 aaPredicted RBP9.81□□□□□ -0.84
LIG4-204ENST00000611712 DNA2P51530 1060 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 TAF3Q5VWG9 929 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 C6orf50Q9HD87 102 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 UBN2Q6ZU65 1347 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 AKR1B10O60218 316 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 LMAN1P49257 510 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 MAP9Q49MG5 647 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 VSTM4Q8IW00 320 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 TXLNBQ8N3L3 684 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 PLA2G12BQ9BX93 195 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 CALCOCO1Q9P1Z2 691 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 HPS5Q9UPZ3 1129 aa9.81□□□□□ -0.84
LIG4-204ENST00000611712 RTCBQ9Y3I0 505 aaKnown RBP9.81□□□□□ -0.84
LIG4-204ENST00000611712 SPATA1Q5VX52 437 aa9.8□□□□□ -0.84
LIG4-204ENST00000611712 SMYD4Q8IYR2 804 aaPredicted RBP9.8□□□□□ -0.84
LIG4-204ENST00000611712 BPIFA3Q9BQP9 254 aa9.8□□□□□ -0.84
LIG4-204ENST00000611712 SENP2Q9HC62 589 aa9.8□□□□□ -0.84
LIG4-204ENST00000611712 SAMSN1Q9NSI8 373 aaKnown RBP9.8□□□□□ -0.84
LIG4-204ENST00000611712 STX10O60499 249 aa9.8□□□□□ -0.84
LIG4-204ENST00000611712 COBLO75128 1261 aa9.8□□□□□ -0.84
LIG4-204ENST00000611712 PTPREP23469 700 aa9.8□□□□□ -0.84
LIG4-204ENST00000611712 GABPB1Q06547 395 aaPredicted RBP9.8□□□□□ -0.84
LIG4-204ENST00000611712 UBE4AQ14139 1066 aa9.8□□□□□ -0.84
LIG4-204ENST00000611712 SYCP1Q15431 976 aa9.8□□□□□ -0.84
LIG4-204ENST00000611712 CEP89Q96ST8 783 aa9.8□□□□□ -0.84
LIG4-204ENST00000611712 ABCC12Q96J65 1359 aa9.8□□□□□ -0.84
LIG4-204ENST00000611712 GSG1L2A8MUP6 293 aa9.8□□□□□ -0.84
LIG4-204ENST00000611712 CHMP4BP1P59074 171 aa9.8□□□□□ -0.84
LIG4-204ENST00000611712 ZNF804AQ7Z570 1209 aa9.8□□□□□ -0.84
LIG4-204ENST00000611712 NELFBQ8WX92 580 aa9.8□□□□□ -0.84
LIG4-204ENST00000611712 EPSTI1Q96J88 318 aa9.8□□□□□ -0.84
LIG4-204ENST00000611712 SCG2P13521 617 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 ALX1Q15699 326 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 CCDC40Q4G0X9 1142 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 SGMS1Q86VZ5 419 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 EHBP1Q8NDI1 1231 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 ENOX1Q8TC92 643 aaKnown RBP9.79□□□□□ -0.84
LIG4-204ENST00000611712 RRP36Q96EU6 259 aaKnown RBP9.79□□□□□ -0.84
LIG4-204ENST00000611712 DRC1Q96MC2 740 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 SRPRBQ9Y5M8 271 aaKnown RBP9.79□□□□□ -0.84
LIG4-204ENST00000611712 SOS2Q07890 1332 aaPredicted RBP9.79□□□□□ -0.84
LIG4-204ENST00000611712 ZNF335Q9H4Z2 1342 aaPredicted RBP9.79□□□□□ -0.84
LIG4-204ENST00000611712 PIK3C2AO00443 1686 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 TMEM232C9JQI7 657 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 F8W031 263 aaPredicted RBP9.79□□□□□ -0.84
LIG4-204ENST00000611712 FOXN1O15353 648 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 ERCC5P28715 1186 aaPredicted RBP9.79□□□□□ -0.84
LIG4-204ENST00000611712 GNA11P29992 359 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 ARMCX5Q6P1M9 558 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 TMTC1Q8IUR5 882 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 STAG1Q8WVM7 1258 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 AGXT2Q9BYV1 514 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 MMRN2Q9H8L6 949 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 TTF2Q9UNY4 1162 aaKnown RBP9.79□□□□□ -0.84
LIG4-204ENST00000611712 SLFN14P0C7P3 912 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 MCM3P25205 808 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 ARID4AP29374 1257 aaPredicted RBP9.79□□□□□ -0.84
LIG4-204ENST00000611712 GUCY1A2P33402 732 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 PAFAH1B1P43034 410 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 MATR3P43243 847 aaKnown RBP eCLIP9.79□□□□□ -0.84
LIG4-204ENST00000611712 KRT83P78385 493 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 CCZ1BP86790 482 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 CCZ1P86791 482 aaPredicted RBP9.79□□□□□ -0.84
LIG4-204ENST00000611712 TBC1D8BQ0IIM8 1120 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 PICALMQ13492 652 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 CYP26C1Q6V0L0 522 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 OXER1Q8TDS5 423 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 IGDCC4Q8TDY8 1250 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 CCDC43Q96MW1 224 aaKnown RBP9.79□□□□□ -0.84
LIG4-204ENST00000611712 SLF1Q9BQI6 1058 aa9.79□□□□□ -0.84
LIG4-204ENST00000611712 KRT86O43790 486 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 KIF20AO95235 890 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 KCNQ4P56696 695 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 CCDC122Q5T0U0 273 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 GPKOWQ92917 476 aaPredicted RBP eCLIP9.78□□□□□ -0.84
LIG4-204ENST00000611712 CAPZA3Q96KX2 299 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 CCDC42Q96M95 316 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 C8orf37Q96NL8 207 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 TCEAL9Q9UHQ7 104 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 CPDO75976 1380 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 BICDL2A1A5D9 508 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 PARP1P09874 1014 aaKnown RBP9.78□□□□□ -0.84
LIG4-204ENST00000611712 PDE4DQ08499 809 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 FBXO38Q6PIJ6 1188 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 BLIDQ8IZY5 108 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 CSGALNACT2Q8N6G5 542 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 GSDMAQ96QA5 445 aa9.78□□□□□ -0.84
LIG4-204ENST00000611712 NAPGQ99747 312 aaPredicted RBP9.78□□□□□ -0.84
LIG4-204ENST00000611712 NAA15Q9BXJ9 866 aaKnown RBP9.78□□□□□ -0.84
LIG4-204ENST00000611712 ARPP21Q9UBL0 812 aaPredicted RBP9.78□□□□□ -0.84
LIG4-204ENST00000611712 ZNF76P36508 570 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms