RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 ZSCAN31Q96LW9 406 aaPredicted RBP19.24■□□□□ 0.67
CDK11B-205ENST00000611150 SH2B1Q9NRF2 756 aaPredicted RBP19.24■□□□□ 0.67
CDK11B-205ENST00000611150 TUBGCP4Q9UGJ1 667 aa19.24■□□□□ 0.67
CDK11B-205ENST00000611150 ADGRL3Q9HAR2 1447 aa19.23■□□□□ 0.67
CDK11B-205ENST00000611150 FAM107AO95990 144 aa19.23■□□□□ 0.67
CDK11B-205ENST00000611150 VIMP08670 466 aaKnown RBP19.23■□□□□ 0.67
CDK11B-205ENST00000611150 EPB41P11171 864 aaKnown RBP19.23■□□□□ 0.67
CDK11B-205ENST00000611150 HARSP12081 509 aaKnown RBP19.23■□□□□ 0.67
CDK11B-205ENST00000611150 ZFXP17010 805 aaPredicted RBP19.23■□□□□ 0.67
CDK11B-205ENST00000611150 KARSQ15046 597 aaKnown RBP19.23■□□□□ 0.67
CDK11B-205ENST00000611150 PKN1Q16512 942 aa19.23■□□□□ 0.67
CDK11B-205ENST00000611150 TMEM139Q8IV31 216 aa19.23■□□□□ 0.67
CDK11B-205ENST00000611150 SNRNP27Q8WVK2 155 aaKnown RBP19.23■□□□□ 0.67
CDK11B-205ENST00000611150 SENP2Q9HC62 589 aa19.23■□□□□ 0.67
CDK11B-205ENST00000611150 PREBQ9HCU5 417 aa19.23■□□□□ 0.67
CDK11B-205ENST00000611150 ZNHIT6Q9NWK9 470 aaKnown RBP19.23■□□□□ 0.67
CDK11B-205ENST00000611150 TMCO1Q9UM00 188 aa19.23■□□□□ 0.67
CDK11B-205ENST00000611150 BARX2Q9UMQ3 279 aaPredicted RBP19.23■□□□□ 0.67
CDK11B-205ENST00000611150 L3MBTL1Q9Y468 752 aa19.23■□□□□ 0.67
CDK11B-205ENST00000611150 KDM5AP29375 1690 aaKnown RBP19.23■□□□□ 0.67
CDK11B-205ENST00000611150 DIAPH2O60879 1101 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 PSMC4P43686 418 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 RHBDL3P58872 404 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 SEPT14Q6ZU15 432 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 SAPCD2Q86UD0 394 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 NLRP14Q86W24 1093 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 CCDC155Q8N6L0 562 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 MYCBPAPQ8TBZ2 947 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 SLIT1O75093 1534 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 ARHGAP23Q9P227 1491 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 NUP155O75694 1391 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 SRRM3A6NNA2 597 aaPredicted RBP19.22■□□□□ 0.67
CDK11B-205ENST00000611150 N4BP3O15049 544 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 TOP1P11387 765 aaKnown RBP19.22■□□□□ 0.67
CDK11B-205ENST00000611150 LACTB2Q53H82 288 aaPredicted RBP19.22■□□□□ 0.67
CDK11B-205ENST00000611150 SLF2Q8IX21 1173 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 WHAMMQ8TF30 809 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 L3MBTL3Q96JM7 780 aaPredicted RBP19.22■□□□□ 0.67
CDK11B-205ENST00000611150 ANKRD27Q96NW4 1050 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 IWS1Q96ST2 819 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 IQGAP1P46940 1657 aa19.22■□□□□ 0.67
CDK11B-205ENST00000611150 TRPC1P48995 793 aa19.21■□□□□ 0.67
CDK11B-205ENST00000611150 FANCCQ00597 558 aa19.21■□□□□ 0.67
CDK11B-205ENST00000611150 TOGARAM2Q6ZUX3 1019 aa19.21■□□□□ 0.67
CDK11B-205ENST00000611150 STAG2Q8N3U4 1231 aa19.21■□□□□ 0.67
CDK11B-205ENST00000611150 MPHOSPH6Q99547 160 aaKnown RBP19.21■□□□□ 0.67
CDK11B-205ENST00000611150 SELENOOQ9BVL4 669 aa19.21■□□□□ 0.67
CDK11B-205ENST00000611150 PIDD1Q9HB75 910 aa19.21■□□□□ 0.67
CDK11B-205ENST00000611150 GPCPD1Q9NPB8 672 aa19.21■□□□□ 0.67
CDK11B-205ENST00000611150 CEBPZQ03701 1054 aaKnown RBP19.21■□□□□ 0.67
CDK11B-205ENST00000611150 NOA1Q8NC60 698 aaKnown RBP19.21■□□□□ 0.67
CDK11B-205ENST00000611150 TARSL2A2RTX5 802 aaKnown RBP19.2■□□□□ 0.66
CDK11B-205ENST00000611150 CCDC175P0C221 793 aa19.2■□□□□ 0.66
CDK11B-205ENST00000611150 ABL2P42684 1182 aa19.2■□□□□ 0.66
CDK11B-205ENST00000611150 USP14P54578 494 aa19.2■□□□□ 0.66
CDK11B-205ENST00000611150 MRPS35P82673 323 aaKnown RBP19.2■□□□□ 0.66
CDK11B-205ENST00000611150 HDLBPQ00341 1268 aaKnown RBP19.2■□□□□ 0.66
CDK11B-205ENST00000611150 PTGISQ16647 500 aa19.2■□□□□ 0.66
CDK11B-205ENST00000611150 EHBP1Q8NDI1 1231 aa19.2■□□□□ 0.66
CDK11B-205ENST00000611150 SPIRE2Q8WWL2 714 aa19.2■□□□□ 0.66
CDK11B-205ENST00000611150 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.2■□□□□ 0.666e-7■□□□□ 9.7
CDK11B-205ENST00000611150 FAM167BQ9BTA0 163 aa19.2■□□□□ 0.66
CDK11B-205ENST00000611150 OSBPL7Q9BZF2 842 aa19.2■□□□□ 0.66
CDK11B-205ENST00000611150 GIGYF1O75420 1035 aaPredicted RBP19.2■□□□□ 0.66
CDK11B-205ENST00000611150 PPP1R37O75864 691 aa19.2■□□□□ 0.66
CDK11B-205ENST00000611150 TMCC1O94876 653 aa19.2■□□□□ 0.66
CDK11B-205ENST00000611150 HIBCHQ6NVY1 386 aaPredicted RBP19.2■□□□□ 0.66
CDK11B-205ENST00000611150 PCDH18Q9HCL0 1135 aa19.2■□□□□ 0.66
CDK11B-205ENST00000611150 SH3TC1Q8TE82 1336 aa19.2■□□□□ 0.66
CDK11B-205ENST00000611150 MYBL1P10243 752 aa19.19■□□□□ 0.66
CDK11B-205ENST00000611150 CA8P35219 290 aa19.19■□□□□ 0.66
CDK11B-205ENST00000611150 POLE2P56282 527 aa19.19■□□□□ 0.66
CDK11B-205ENST00000611150 LBRQ14739 615 aaKnown RBP19.19■□□□□ 0.66
CDK11B-205ENST00000611150 BICDL1Q6ZP65 573 aa19.19■□□□□ 0.66
CDK11B-205ENST00000611150 CCDC73Q6ZRK6 1079 aa19.19■□□□□ 0.66
CDK11B-205ENST00000611150 ATRIPQ8WXE1 791 aa19.19■□□□□ 0.66
CDK11B-205ENST00000611150 MOV10L1Q9BXT6 1211 aaKnown RBP19.19■□□□□ 0.66
CDK11B-205ENST00000611150 CBX3Q13185 183 aa19.19■□□□□ 0.66
CDK11B-205ENST00000611150 BTG3Q14201 252 aaPredicted RBP19.19■□□□□ 0.66
CDK11B-205ENST00000611150 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.19■□□□□ 0.66
CDK11B-205ENST00000611150 TXNDC2Q86VQ3 553 aa19.19■□□□□ 0.66
CDK11B-205ENST00000611150 HOOK3Q86VS8 718 aa19.19■□□□□ 0.66
CDK11B-205ENST00000611150 ZBTB8BQ8NAP8 495 aaPredicted RBP19.19■□□□□ 0.66
CDK11B-205ENST00000611150 TMEM2Q9UHN6 1383 aa19.19■□□□□ 0.66
CDK11B-205ENST00000611150 PTCH1Q13635 1447 aa19.18■□□□□ 0.66
CDK11B-205ENST00000611150 SLC27A2O14975 620 aa19.18■□□□□ 0.66
CDK11B-205ENST00000611150 LTKP29376 864 aa19.18■□□□□ 0.66
CDK11B-205ENST00000611150 PDE1AP54750 535 aa19.18■□□□□ 0.66
CDK11B-205ENST00000611150 UBASH3AP57075 661 aa19.18■□□□□ 0.66
CDK11B-205ENST00000611150 PUS10Q3MIT2 529 aaKnown RBP19.18■□□□□ 0.66
CDK11B-205ENST00000611150 CCDC65Q8IXS2 484 aa19.18■□□□□ 0.66
CDK11B-205ENST00000611150 EID1Q9Y6B2 187 aa19.18■□□□□ 0.66
CDK11B-205ENST00000611150 UBN2Q6ZU65 1347 aa19.18■□□□□ 0.66
CDK11B-205ENST00000611150 PPP1R7Q15435 360 aa19.18■□□□□ 0.66
CDK11B-205ENST00000611150 KLHL10Q6JEL2 608 aa19.18■□□□□ 0.66
CDK11B-205ENST00000611150 VSTM4Q8IW00 320 aa19.18■□□□□ 0.66
CDK11B-205ENST00000611150 ABCF2Q9UG63 623 aa19.18■□□□□ 0.66
CDK11B-205ENST00000611150 ADGRB3O60242 1522 aa19.17■□□□□ 0.66
CDK11B-205ENST00000611150 A0A087WWV3 80 aa19.17■□□□□ 0.66
CDK11B-205ENST00000611150 PALM3A6NDB9 673 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 234.3 ms