RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 TOB1P50616 345 aaPredicted RBP13.74□□□□□ -0.21
USP6NL-206ENST00000609853 NLRP12P59046 1061 aa13.74□□□□□ -0.21
USP6NL-206ENST00000609853 SHC4Q6S5L8 630 aa13.74□□□□□ -0.21
USP6NL-206ENST00000609853 SH3RF3Q8TEJ3 882 aaPredicted RBP13.74□□□□□ -0.21
USP6NL-206ENST00000609853 MRFAP1L1Q96HT8 127 aa13.74□□□□□ -0.21
USP6NL-206ENST00000609853 RTFDC1Q9BY42 306 aaPredicted RBP13.74□□□□□ -0.21
USP6NL-206ENST00000609853 FAM13BQ9NYF5 915 aa13.74□□□□□ -0.21
USP6NL-206ENST00000609853 V9GY48 417 aaPredicted RBP13.74□□□□□ -0.21
USP6NL-206ENST00000609853 UBE2Q2LH0YL09 131 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 USP17L8P0C7I0 530 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 CYP2D6P10635 497 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 C11orf57Q6ZUT1 292 aaPredicted RBP13.73□□□□□ -0.21
USP6NL-206ENST00000609853 CMTR1Q8N1G2 835 aaKnown RBP13.73□□□□□ -0.21
USP6NL-206ENST00000609853 PIBF1Q8WXW3 757 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 KAT14Q9H8E8 782 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 MKNK2Q9HBH9 465 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 JAG2Q9Y219 1238 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 ATP6V0A2Q9Y487 856 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 SRPRBQ9Y5M8 271 aaKnown RBP13.73□□□□□ -0.21
USP6NL-206ENST00000609853 GAKO14976 1311 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 CNTNAP5Q8WYK1 1306 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 PPEF1O14829 653 aaPredicted RBP13.73□□□□□ -0.21
USP6NL-206ENST00000609853 ALDH1B1P30837 517 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 TRAPPC10P48553 1259 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 TPM4P67936 248 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 TFAP4Q01664 338 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 FAM47AQ5JRC9 791 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 ZNF772Q68DY9 489 aaPredicted RBP13.73□□□□□ -0.21
USP6NL-206ENST00000609853 RCSD1Q6JBY9 416 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 KANK3Q6NY19 840 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 ZNF444Q8N0Y2 327 aaPredicted RBP13.73□□□□□ -0.21
USP6NL-206ENST00000609853 PROM2Q8N271 834 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 CCDC34Q96HJ3 373 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 COA1Q9GZY4 146 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 SH3GLB2Q9NR46 395 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 TUBE1Q9UJT0 475 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 KCNH3Q9ULD8 1083 aa13.73□□□□□ -0.21
USP6NL-206ENST00000609853 ANKRD31Q8N7Z5 1873 aa13.72□□□□□ -0.21
USP6NL-206ENST00000609853 TRIM75PA6NK02 468 aa13.72□□□□□ -0.21
USP6NL-206ENST00000609853 SMTNL1A8MU46 457 aa13.72□□□□□ -0.21
USP6NL-206ENST00000609853 PLEKHA8P1O95397 391 aa13.72□□□□□ -0.21
USP6NL-206ENST00000609853 NPR1P16066 1061 aa13.72□□□□□ -0.21
USP6NL-206ENST00000609853 CALML3P27482 149 aa13.72□□□□□ -0.21
USP6NL-206ENST00000609853 BTDP43251 543 aa13.72□□□□□ -0.21
USP6NL-206ENST00000609853 DIXDC1Q155Q3 683 aa13.72□□□□□ -0.21
USP6NL-206ENST00000609853 MFSD14BQ5SR56 506 aa13.72□□□□□ -0.21
USP6NL-206ENST00000609853 DHX40Q8IX18 779 aaKnown RBP13.72□□□□□ -0.21
USP6NL-206ENST00000609853 LZTS2Q9BRK4 669 aa13.72□□□□□ -0.21
USP6NL-206ENST00000609853 POLLQ9UGP5 575 aa13.72□□□□□ -0.21
USP6NL-206ENST00000609853 FBXO2Q9UK22 296 aaPredicted RBP13.72□□□□□ -0.21
USP6NL-206ENST00000609853 FOCADQ5VW36 1801 aa13.72□□□□□ -0.21
USP6NL-206ENST00000609853 DDX60LQ5H9U9 1706 aaKnown RBP13.71□□□□□ -0.21
USP6NL-206ENST00000609853 C6orf229H3BNL8 230 aa13.71□□□□□ -0.21
USP6NL-206ENST00000609853 TSPY3P0CV98 308 aa13.71□□□□□ -0.21
USP6NL-206ENST00000609853 TSPY8P0CW00 308 aa13.71□□□□□ -0.21
USP6NL-206ENST00000609853 SCG2P13521 617 aa13.71□□□□□ -0.21
USP6NL-206ENST00000609853 PDE6BP35913 854 aa13.71□□□□□ -0.21
USP6NL-206ENST00000609853 NR5A1Q13285 461 aa13.71□□□□□ -0.21
USP6NL-206ENST00000609853 DHX8Q14562 1220 aaKnown RBP13.71□□□□□ -0.21
USP6NL-206ENST00000609853 PFKFB3Q16875 520 aaPredicted RBP13.71□□□□□ -0.21
USP6NL-206ENST00000609853 KRBA2Q6ZNG9 492 aa13.71□□□□□ -0.21
USP6NL-206ENST00000609853 SRBD1Q8N5C6 995 aaKnown RBP13.71□□□□□ -0.21
USP6NL-206ENST00000609853 TGFBRAP1Q8WUH2 860 aa13.71□□□□□ -0.21
USP6NL-206ENST00000609853 FERMT2Q96AC1 680 aa13.71□□□□□ -0.21
USP6NL-206ENST00000609853 TMX4Q9H1E5 349 aaPredicted RBP13.71□□□□□ -0.21
USP6NL-206ENST00000609853 CABP5Q9NP86 173 aa13.71□□□□□ -0.21
USP6NL-206ENST00000609853 VPS54Q9P1Q0 977 aa13.71□□□□□ -0.21
USP6NL-206ENST00000609853 MYH1P12882 1939 aa13.71□□□□□ -0.22
USP6NL-206ENST00000609853 IKBKBO14920 756 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 MYO1BO43795 1136 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 GRM4Q14833 912 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 POTEAQ6S8J7 498 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 C16orf86Q6ZW13 317 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 DRC7Q8IY82 874 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 TEX11Q8IYF3 940 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 PNMA1Q8ND90 353 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 CNNM3Q8NE01 707 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 AKT1S1Q96B36 256 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 NEMFO60524 1076 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 NMT2O60551 498 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 SRGNP10124 158 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 GRIK5Q16478 980 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 GALNT17Q6IS24 598 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 OXER1Q8TDS5 423 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 TNFRSF25Q93038 417 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 NAP1L5Q96NT1 182 aaPredicted RBP13.7□□□□□ -0.22
USP6NL-206ENST00000609853 CLIC6Q96NY7 704 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 TTC12Q9H892 705 aaPredicted RBP13.7□□□□□ -0.22
USP6NL-206ENST00000609853 IL17RBQ9NRM6 502 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 SPTLC3Q9NUV7 552 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 PCDHB6Q9Y5E3 794 aa13.7□□□□□ -0.22
USP6NL-206ENST00000609853 SPC24Q8NBT2 197 aa13.69□□□□□ -0.22
USP6NL-206ENST00000609853 GPR101Q96P66 508 aaPredicted RBP13.69□□□□□ -0.22
USP6NL-206ENST00000609853 ZC3H12CQ9C0D7 883 aaKnown RBP13.69□□□□□ -0.22
USP6NL-206ENST00000609853 CLIP2Q9UDT6 1046 aa13.69□□□□□ -0.22
USP6NL-206ENST00000609853 TAOK2Q9UL54 1235 aa13.69□□□□□ -0.22
USP6NL-206ENST00000609853 QSER1Q2KHR3 1735 aa13.69□□□□□ -0.22
USP6NL-206ENST00000609853 EP400Q96L91 3159 aa13.68□□□□□ -0.22
USP6NL-206ENST00000609853 RGPD3A6NKT7 1758 aaPredicted RBP13.68□□□□□ -0.22
USP6NL-206ENST00000609853 RGPD4Q7Z3J3 1758 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms