RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 TRIM26Q12899 539 aaPredicted RBP10.28□□□□□ -0.76
LINC01396-201ENST00000609099 IFIT5Q13325 482 aaKnown RBP10.28□□□□□ -0.76
LINC01396-201ENST00000609099 LRRC24Q50LG9 513 aa10.28□□□□□ -0.76
LINC01396-201ENST00000609099 LDHAL6AQ6ZMR3 332 aa10.28□□□□□ -0.76
LINC01396-201ENST00000609099 GPR142Q7Z601 462 aa10.28□□□□□ -0.76
LINC01396-201ENST00000609099 PROCA1Q8NCQ7 364 aaPredicted RBP10.28□□□□□ -0.76
LINC01396-201ENST00000609099 TBC1D22AQ8WUA7 517 aa10.28□□□□□ -0.76
LINC01396-201ENST00000609099 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.28□□□□□ -0.76
LINC01396-201ENST00000609099 LRRFIP2Q9Y608 721 aaKnown RBP10.28□□□□□ -0.76
LINC01396-201ENST00000609099 NDUFB9Q9Y6M9 179 aa10.28□□□□□ -0.76
LINC01396-201ENST00000609099 A0A0G2JMZ2 1700 aa10.27□□□□□ -0.76
LINC01396-201ENST00000609099 CACNA1BQ00975 2339 aa10.27□□□□□ -0.77
LINC01396-201ENST00000609099 RBAK-RBAKDNI3L0D1 243 aa10.27□□□□□ -0.77
LINC01396-201ENST00000609099 KIAA0355O15063 1070 aa10.27□□□□□ -0.77
LINC01396-201ENST00000609099 FRAT2O75474 233 aaPredicted RBP10.27□□□□□ -0.77
LINC01396-201ENST00000609099 CLTBP09497 229 aa10.27□□□□□ -0.77
LINC01396-201ENST00000609099 CYP2C19P33261 490 aa10.27□□□□□ -0.77
LINC01396-201ENST00000609099 SPP2Q13103 211 aa10.27□□□□□ -0.77
LINC01396-201ENST00000609099 SH3D19Q5HYK7 790 aa10.27□□□□□ -0.77
LINC01396-201ENST00000609099 C1orf53Q5VUE5 145 aa10.27□□□□□ -0.77
LINC01396-201ENST00000609099 KRT40Q6A162 431 aa10.27□□□□□ -0.77
LINC01396-201ENST00000609099 ERMP1Q7Z2K6 904 aa10.27□□□□□ -0.77
LINC01396-201ENST00000609099 GPRC5AQ8NFJ5 357 aa10.27□□□□□ -0.77
LINC01396-201ENST00000609099 ZNF384Q8TF68 577 aa10.27□□□□□ -0.77
LINC01396-201ENST00000609099 HLA-CQ95604 372 aa10.27□□□□□ -0.77
LINC01396-201ENST00000609099 APBA2Q99767 749 aa10.27□□□□□ -0.77
LINC01396-201ENST00000609099 OCEL1Q9H607 264 aa10.27□□□□□ -0.77
LINC01396-201ENST00000609099 MAST3O60307 1309 aa10.27□□□□□ -0.77
LINC01396-201ENST00000609099 FRYLO94915 3013 aa10.26□□□□□ -0.77
LINC01396-201ENST00000609099 ZNF236Q9UL36 1845 aa10.26□□□□□ -0.77
LINC01396-201ENST00000609099 EPOPA6NHQ4 379 aa10.26□□□□□ -0.77
LINC01396-201ENST00000609099 GLRX3O76003 335 aaKnown RBP10.26□□□□□ -0.77
LINC01396-201ENST00000609099 HERVK_113P62684 666 aa10.26□□□□□ -0.77
LINC01396-201ENST00000609099 FERMT2Q96AC1 680 aa10.26□□□□□ -0.77
LINC01396-201ENST00000609099 VWCEQ96DN2 955 aa10.26□□□□□ -0.77
LINC01396-201ENST00000609099 MFSD14AQ96MC6 490 aa10.26□□□□□ -0.77
LINC01396-201ENST00000609099 IDI2Q9BXS1 227 aa10.26□□□□□ -0.77
LINC01396-201ENST00000609099 TMEM39AQ9NV64 488 aa10.26□□□□□ -0.77
LINC01396-201ENST00000609099 UTYO14607 1347 aa10.26□□□□□ -0.77
LINC01396-201ENST00000609099 CTNND1O60716 968 aaKnown RBP10.25□□□□□ -0.77
LINC01396-201ENST00000609099 ARHGEF15O94989 841 aa10.25□□□□□ -0.77
LINC01396-201ENST00000609099 FGFR2P21802 821 aa10.25□□□□□ -0.77
LINC01396-201ENST00000609099 ADCYAP1R1P41586 468 aa10.25□□□□□ -0.77
LINC01396-201ENST00000609099 ERVK-9P63128 1117 aa10.25□□□□□ -0.77
LINC01396-201ENST00000609099 ERVK-24P63145 666 aa10.25□□□□□ -0.77
LINC01396-201ENST00000609099 ATP2B2Q01814 1243 aa10.25□□□□□ -0.77
LINC01396-201ENST00000609099 NEXNQ0ZGT2 675 aa10.25□□□□□ -0.77
LINC01396-201ENST00000609099 TMEM240Q5SV17 173 aa10.25□□□□□ -0.77
LINC01396-201ENST00000609099 VPS37DQ86XT2 251 aa10.25□□□□□ -0.77
LINC01396-201ENST00000609099 EDC3Q96F86 508 aaKnown RBP10.25□□□□□ -0.77
LINC01396-201ENST00000609099 MTIF3Q9H2K0 278 aaKnown RBP10.25□□□□□ -0.77
LINC01396-201ENST00000609099 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.25□□□□□ -0.77
LINC01396-201ENST00000609099 CNNM1Q9NRU3 951 aa10.25□□□□□ -0.77
LINC01396-201ENST00000609099 USP40Q9NVE5 1235 aa10.25□□□□□ -0.77
LINC01396-201ENST00000609099 IFT57Q9NWB7 429 aa10.25□□□□□ -0.77
LINC01396-201ENST00000609099 CHMP3Q9Y3E7 222 aa10.25□□□□□ -0.77
LINC01396-201ENST00000609099 CACNA1GO43497 2377 aa10.25□□□□□ -0.77
LINC01396-201ENST00000609099 COL4A4P53420 1690 aaPredicted RBP10.25□□□□□ -0.77
LINC01396-201ENST00000609099 CHD6Q8TD26 2715 aa10.24□□□□□ -0.77
LINC01396-201ENST00000609099 F6X3S4 739 aa10.24□□□□□ -0.77
LINC01396-201ENST00000609099 RFXAPO00287 272 aa10.24□□□□□ -0.77
LINC01396-201ENST00000609099 PYGBP11216 843 aa10.24□□□□□ -0.77
LINC01396-201ENST00000609099 SSTR3P32745 418 aaPredicted RBP10.24□□□□□ -0.77
LINC01396-201ENST00000609099 IRX3P78415 501 aaPredicted RBP10.24□□□□□ -0.77
LINC01396-201ENST00000609099 MAP2K5Q13163 448 aa10.24□□□□□ -0.77
LINC01396-201ENST00000609099 PPIGQ13427 754 aaKnown RBP eCLIP10.24□□□□□ -0.77
LINC01396-201ENST00000609099 BEND3Q5T5X7 828 aa10.24□□□□□ -0.77
LINC01396-201ENST00000609099 PLEKHH3Q7Z736 793 aa10.24□□□□□ -0.77
LINC01396-201ENST00000609099 ZNF280CQ8ND82 737 aa10.24□□□□□ -0.77
LINC01396-201ENST00000609099 LINS1Q8NG48 757 aa10.24□□□□□ -0.77
LINC01396-201ENST00000609099 NKX2-4Q9H2Z4 354 aa10.24□□□□□ -0.77
LINC01396-201ENST00000609099 GAKO14976 1311 aa10.24□□□□□ -0.77
LINC01396-201ENST00000609099 CDK5RAP2Q96SN8 1893 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 NCOR2Q9Y618 2525 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 MYOGP15173 224 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 HOXA7P31268 230 aaPredicted RBP10.23□□□□□ -0.77
LINC01396-201ENST00000609099 PTPN5P54829 565 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 RHBDL3P58872 404 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 FAAP100Q0VG06 881 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 FLIIQ13045 1269 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 LRRC41Q15345 812 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 FAM47AQ5JRC9 791 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 CCDC30Q5VVM6 783 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 SPRED2Q7Z698 418 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 GJD3Q8N144 294 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 SLC44A5Q8NCS7 719 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 KLHDC4Q8TBB5 520 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 TSR2Q969E8 191 aaKnown RBP10.23□□□□□ -0.77
LINC01396-201ENST00000609099 SUCLG2Q96I99 432 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 PRRX2Q99811 253 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 DNAJC18Q9H819 358 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 SUGT1Q9Y2Z0 365 aa10.23□□□□□ -0.77
LINC01396-201ENST00000609099 ZNF292O60281 2723 aa10.22□□□□□ -0.77
LINC01396-201ENST00000609099 RIF1Q5UIP0 2472 aaKnown RBP10.22□□□□□ -0.77
LINC01396-201ENST00000609099 DCDC2CA8MYV0 355 aa10.22□□□□□ -0.77
LINC01396-201ENST00000609099 GFRA3O60609 400 aa10.22□□□□□ -0.77
LINC01396-201ENST00000609099 ENTPD3O75355 529 aa10.22□□□□□ -0.77
LINC01396-201ENST00000609099 HOXC6P09630 235 aa10.22□□□□□ -0.77
LINC01396-201ENST00000609099 MTMR2Q13614 643 aa10.22□□□□□ -0.77
LINC01396-201ENST00000609099 PRAMEF19Q5SWL8 479 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms