RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 HTTP42858 3142 aa17.36■□□□□ 0.37
HDDC2-204ENST00000608295 OSBPP22059 807 aa17.35■□□□□ 0.37
HDDC2-204ENST00000608295 NUCB1Q02818 461 aa17.35■□□□□ 0.37
HDDC2-204ENST00000608295 LRRFIP1Q32MZ4 808 aaKnown RBP17.35■□□□□ 0.37
HDDC2-204ENST00000608295 SH3D19Q5HYK7 790 aa17.35■□□□□ 0.37
HDDC2-204ENST00000608295 ZMYM1Q5SVZ6 1142 aa17.35■□□□□ 0.37
HDDC2-204ENST00000608295 SAMD1Q6SPF0 538 aaPredicted RBP17.35■□□□□ 0.37
HDDC2-204ENST00000608295 SH3TC2Q8TF17 1288 aa17.35■□□□□ 0.37
HDDC2-204ENST00000608295 EVI5LQ96CN4 794 aa17.35■□□□□ 0.37
HDDC2-204ENST00000608295 FAM227BQ96M60 508 aa17.35■□□□□ 0.37
HDDC2-204ENST00000608295 PAGR1Q9BTK6 254 aa17.35■□□□□ 0.37
HDDC2-204ENST00000608295 SWAP70Q9UH65 585 aa17.35■□□□□ 0.37
HDDC2-204ENST00000608295 RAD21O60216 631 aa17.34■□□□□ 0.37
HDDC2-204ENST00000608295 PRDM1O75626 825 aa17.34■□□□□ 0.37
HDDC2-204ENST00000608295 PABPC4Q13310 644 aaKnown RBP eCLIP17.34■□□□□ 0.372e-10■■□□□ 12.4
HDDC2-204ENST00000608295 USP17L2Q6R6M4 530 aa17.34■□□□□ 0.37
HDDC2-204ENST00000608295 C16orf86Q6ZW13 317 aa17.34■□□□□ 0.37
HDDC2-204ENST00000608295 MYPNQ86TC9 1320 aa17.34■□□□□ 0.37
HDDC2-204ENST00000608295 PLEKHM2Q8IWE5 1019 aa17.34■□□□□ 0.37
HDDC2-204ENST00000608295 GINM1Q9NU53 330 aa17.34■□□□□ 0.37
HDDC2-204ENST00000608295 SLC45A1Q9Y2W3 748 aa17.34■□□□□ 0.37
HDDC2-204ENST00000608295 DOCK3Q8IZD9 2030 aa17.33■□□□□ 0.37
HDDC2-204ENST00000608295 A0A0D9SFI3 127 aa17.33■□□□□ 0.36
HDDC2-204ENST00000608295 A0A1W2PRG0 241 aa17.33■□□□□ 0.36
HDDC2-204ENST00000608295 C19orf81C9J6K1 198 aa17.33■□□□□ 0.36
HDDC2-204ENST00000608295 FCGRTP55899 365 aa17.33■□□□□ 0.36
HDDC2-204ENST00000608295 ICA1Q05084 483 aa17.33■□□□□ 0.36
HDDC2-204ENST00000608295 PRKCZQ05513 592 aa17.33■□□□□ 0.36
HDDC2-204ENST00000608295 ARHGEF6Q15052 776 aa17.33■□□□□ 0.36
HDDC2-204ENST00000608295 SLC9C1Q4G0N8 1177 aa17.33■□□□□ 0.36
HDDC2-204ENST00000608295 TMEM179Q6ZVK1 233 aa17.33■□□□□ 0.36
HDDC2-204ENST00000608295 NAPBQ9H115 298 aa17.33■□□□□ 0.36
HDDC2-204ENST00000608295 GABRQQ9UN88 632 aa17.33■□□□□ 0.36
HDDC2-204ENST00000608295 MYH4Q9Y623 1939 aa17.33■□□□□ 0.36
HDDC2-204ENST00000608295 GREB1LQ9C091 1923 aaPredicted RBP17.32■□□□□ 0.36
HDDC2-204ENST00000608295 TNPO2O14787 897 aaKnown RBP17.32■□□□□ 0.36
HDDC2-204ENST00000608295 GNAT2P19087 354 aa17.32■□□□□ 0.36
HDDC2-204ENST00000608295 VCAM1P19320 739 aa17.32■□□□□ 0.36
HDDC2-204ENST00000608295 NMIQ13287 307 aaPredicted RBP17.32■□□□□ 0.36
HDDC2-204ENST00000608295 VPS53Q5VIR6 699 aa17.32■□□□□ 0.36
HDDC2-204ENST00000608295 IFNL3Q8IZI9 196 aa17.32■□□□□ 0.36
HDDC2-204ENST00000608295 SPICE1Q8N0Z3 855 aa17.32■□□□□ 0.36
HDDC2-204ENST00000608295 P2RX7Q99572 595 aaKnown RBP17.32■□□□□ 0.36
HDDC2-204ENST00000608295 HERVK_113P62684 666 aa17.31■□□□□ 0.36
HDDC2-204ENST00000608295 RAET1EQ8TD07 263 aa17.31■□□□□ 0.36
HDDC2-204ENST00000608295 TANGO6Q9C0B7 1094 aa17.31■□□□□ 0.36
HDDC2-204ENST00000608295 RPAP3Q9H6T3 665 aaPredicted RBP17.31■□□□□ 0.36
HDDC2-204ENST00000608295 MKNK2Q9HBH9 465 aa17.31■□□□□ 0.36
HDDC2-204ENST00000608295 TXNRD2Q9NNW7 524 aa17.31■□□□□ 0.36
HDDC2-204ENST00000608295 SRRDQ9UH36 339 aa17.31■□□□□ 0.36
HDDC2-204ENST00000608295 ROBO3Q96MS0 1386 aa17.3■□□□□ 0.36
HDDC2-204ENST00000608295 PDE4AP27815 886 aa17.3■□□□□ 0.36
HDDC2-204ENST00000608295 FAM110CQ1W6H9 321 aa17.3■□□□□ 0.36
HDDC2-204ENST00000608295 KIAA1755Q5JYT7 1200 aa17.3■□□□□ 0.36
HDDC2-204ENST00000608295 NACAP1Q9BZK3 213 aa17.3■□□□□ 0.36
HDDC2-204ENST00000608295 KIAA1683Q9H0B3 1180 aa17.3■□□□□ 0.36
HDDC2-204ENST00000608295 ARHGEF10LQ9HCE6 1279 aa17.3■□□□□ 0.36
HDDC2-204ENST00000608295 PARP14Q460N5 1801 aa17.29■□□□□ 0.36
HDDC2-204ENST00000608295 POTEFA5A3E0 1075 aa17.29■□□□□ 0.36
HDDC2-204ENST00000608295 PATL2C9JE40 543 aaKnown RBP17.29■□□□□ 0.36
HDDC2-204ENST00000608295 FOXP2O15409 715 aa17.29■□□□□ 0.36
HDDC2-204ENST00000608295 RASA1P20936 1047 aa17.29■□□□□ 0.36
HDDC2-204ENST00000608295 USP14P54578 494 aa17.29■□□□□ 0.36
HDDC2-204ENST00000608295 CTDSPL2Q05D32 466 aa17.29■□□□□ 0.36
HDDC2-204ENST00000608295 SBK1Q52WX2 424 aa17.29■□□□□ 0.36
HDDC2-204ENST00000608295 ZNF589Q86UQ0 364 aaPredicted RBP17.29■□□□□ 0.36
HDDC2-204ENST00000608295 CHMP4CQ96CF2 233 aa17.29■□□□□ 0.36
HDDC2-204ENST00000608295 CENPFP49454 3210 aa17.28■□□□□ 0.36
HDDC2-204ENST00000608295 EEF2P13639 858 aaKnown RBP17.28■□□□□ 0.36
HDDC2-204ENST00000608295 ELNP15502 786 aa17.28■□□□□ 0.36
HDDC2-204ENST00000608295 GCLCP48506 637 aaPredicted RBP17.28■□□□□ 0.36
HDDC2-204ENST00000608295 WDR78Q5VTH9 848 aa17.28■□□□□ 0.36
HDDC2-204ENST00000608295 GIMAP6Q6P9H5 292 aa17.28■□□□□ 0.36
HDDC2-204ENST00000608295 C12orf42Q96LP6 360 aa17.28■□□□□ 0.36
HDDC2-204ENST00000608295 BIN2Q9UBW5 565 aaPredicted RBP17.28■□□□□ 0.36
HDDC2-204ENST00000608295 PLXNB2O15031 1838 aa17.28■□□□□ 0.36
HDDC2-204ENST00000608295 COL11A1P12107 1806 aaPredicted RBP17.28■□□□□ 0.36
HDDC2-204ENST00000608295 RBBP6Q7Z6E9 1792 aaKnown RBP17.28■□□□□ 0.36
HDDC2-204ENST00000608295 USP17L15C9J2P7 530 aa17.27■□□□□ 0.36
HDDC2-204ENST00000608295 USP17L13C9JLJ4 530 aa17.27■□□□□ 0.36
HDDC2-204ENST00000608295 USP17L11C9JVI0 530 aa17.27■□□□□ 0.36
HDDC2-204ENST00000608295 USP17L18D6R9N7 530 aa17.27■□□□□ 0.36
HDDC2-204ENST00000608295 USP17L22D6RA61 530 aa17.27■□□□□ 0.36
HDDC2-204ENST00000608295 USP17L17D6RBQ6 530 aa17.27■□□□□ 0.36
HDDC2-204ENST00000608295 USP17L19D6RCP7 530 aa17.27■□□□□ 0.36
HDDC2-204ENST00000608295 USP17L20D6RJB6 530 aa17.27■□□□□ 0.36
HDDC2-204ENST00000608295 HOXD10P28358 340 aa17.27■□□□□ 0.36
HDDC2-204ENST00000608295 HOXA7P31268 230 aaPredicted RBP17.27■□□□□ 0.36
HDDC2-204ENST00000608295 FLT3LGP49771 235 aa17.27■□□□□ 0.36
HDDC2-204ENST00000608295 MLLT1Q03111 559 aaPredicted RBP17.27■□□□□ 0.36
HDDC2-204ENST00000608295 PPARAQ07869 468 aa17.27■□□□□ 0.36
HDDC2-204ENST00000608295 USP17L24Q0WX57 530 aa17.27■□□□□ 0.36
HDDC2-204ENST00000608295 FAM47AQ5JRC9 791 aa17.27■□□□□ 0.36
HDDC2-204ENST00000608295 ZNF333Q96JL9 665 aa17.27■□□□□ 0.36
HDDC2-204ENST00000608295 CCDC17Q96LX7 622 aa17.27■□□□□ 0.36
HDDC2-204ENST00000608295 CWC22Q9HCG8 908 aaKnown RBP17.27■□□□□ 0.36
HDDC2-204ENST00000608295 INCENPQ9NQS7 918 aa17.27■□□□□ 0.36
HDDC2-204ENST00000608295 A0A0G2JMZ2 1700 aa17.27■□□□□ 0.35
HDDC2-204ENST00000608295 KIAA0100Q14667 2235 aaKnown RBP17.27■□□□□ 0.35
HDDC2-204ENST00000608295 RLFQ13129 1914 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms