RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 SHROOM1Q2M3G4 852 aaPredicted RBP22.58■■□□□ 1.21
NECAB3-220ENST00000606699 POTEEQ6S8J3 1075 aa22.58■■□□□ 1.21
NECAB3-220ENST00000606699 EDC3Q96F86 508 aaKnown RBP22.58■■□□□ 1.21
NECAB3-220ENST00000606699 CWC22Q9HCG8 908 aaKnown RBP22.58■■□□□ 1.21
NECAB3-220ENST00000606699 SAP30BPQ9UHR5 308 aaKnown RBP22.58■■□□□ 1.21
NECAB3-220ENST00000606699 GH2P01242 217 aa22.57■■□□□ 1.2
NECAB3-220ENST00000606699 ZAP70P43403 619 aa22.57■■□□□ 1.2
NECAB3-220ENST00000606699 EHD4Q9H223 541 aa22.57■■□□□ 1.2
NECAB3-220ENST00000606699 MTMR10Q9NXD2 777 aa22.57■■□□□ 1.2
NECAB3-220ENST00000606699 CUL9Q8IWT3 2517 aa22.56■■□□□ 1.2
NECAB3-220ENST00000606699 SLC15A5A6NIM6 579 aa22.56■■□□□ 1.2
NECAB3-220ENST00000606699 CYP7A1P22680 504 aa22.56■■□□□ 1.2
NECAB3-220ENST00000606699 LRRC26Q2I0M4 334 aa22.56■■□□□ 1.2
NECAB3-220ENST00000606699 MFSD14CQ5VZR4 134 aa22.56■■□□□ 1.2
NECAB3-220ENST00000606699 LBX2Q6XYB7 198 aa22.56■■□□□ 1.2
NECAB3-220ENST00000606699 KIAA1683Q9H0B3 1180 aa22.56■■□□□ 1.2
NECAB3-220ENST00000606699 MSCO60682 206 aa22.55■■□□□ 1.2
NECAB3-220ENST00000606699 SURF6O75683 361 aaKnown RBP22.55■■□□□ 1.2
NECAB3-220ENST00000606699 DYNLL1P63167 89 aaKnown RBP22.55■■□□□ 1.2
NECAB3-220ENST00000606699 CATSPERGQ6ZRH7 1159 aa22.55■■□□□ 1.2
NECAB3-220ENST00000606699 Q7L0L9 218 aa22.55■■□□□ 1.2
NECAB3-220ENST00000606699 FTSJ3Q8IY81 847 aaKnown RBP22.55■■□□□ 1.2
NECAB3-220ENST00000606699 TMEM57Q8N5G2 664 aa22.55■■□□□ 1.2
NECAB3-220ENST00000606699 FEZ1Q99689 392 aa22.55■■□□□ 1.2
NECAB3-220ENST00000606699 PIH1D3Q9NQM4 214 aaKnown RBP22.55■■□□□ 1.2
NECAB3-220ENST00000606699 SERPINB13Q9UIV8 391 aa22.55■■□□□ 1.2
NECAB3-220ENST00000606699 NOP58Q9Y2X3 529 aaKnown RBP22.55■■□□□ 1.2
NECAB3-220ENST00000606699 MAST2Q6P0Q8 1798 aa22.55■■□□□ 1.2
NECAB3-220ENST00000606699 CNMDO75829 334 aa22.54■■□□□ 1.2
NECAB3-220ENST00000606699 HOXC6P09630 235 aa22.54■■□□□ 1.2
NECAB3-220ENST00000606699 RLBP1P12271 317 aa22.54■■□□□ 1.2
NECAB3-220ENST00000606699 USP5P45974 858 aa22.54■■□□□ 1.2
NECAB3-220ENST00000606699 TTC6Q86TZ1 520 aa22.54■■□□□ 1.2
NECAB3-220ENST00000606699 FOCADQ5VW36 1801 aa22.53■■□□□ 1.2
NECAB3-220ENST00000606699 PTPREP23469 700 aa22.53■■□□□ 1.2
NECAB3-220ENST00000606699 CERKLQ49MI3 558 aaPredicted RBP22.53■■□□□ 1.2
NECAB3-220ENST00000606699 IDH1O75874 414 aaKnown RBP22.52■■□□□ 1.2
NECAB3-220ENST00000606699 RAB3GAP1Q15042 981 aa22.52■■□□□ 1.2
NECAB3-220ENST00000606699 FAM109BQ6ICB4 259 aaPredicted RBP22.52■■□□□ 1.2
NECAB3-220ENST00000606699 CABP5Q9NP86 173 aa22.52■■□□□ 1.2
NECAB3-220ENST00000606699 DBNLQ9UJU6 430 aaKnown RBP22.52■■□□□ 1.2
NECAB3-220ENST00000606699 IVNS1ABPQ9Y6Y0 642 aa22.52■■□□□ 1.2
NECAB3-220ENST00000606699 VCAM1P19320 739 aa22.51■■□□□ 1.19
NECAB3-220ENST00000606699 ATP2B2Q01814 1243 aa22.51■■□□□ 1.19
NECAB3-220ENST00000606699 GRB14Q14449 540 aa22.51■■□□□ 1.19
NECAB3-220ENST00000606699 ZYXQ15942 572 aaKnown RBP22.51■■□□□ 1.19
NECAB3-220ENST00000606699 ABCB5Q2M3G0 1257 aa22.51■■□□□ 1.19
NECAB3-220ENST00000606699 PANK1Q8TE04 598 aa22.51■■□□□ 1.19
NECAB3-220ENST00000606699 LPAR1Q92633 364 aa22.51■■□□□ 1.19
NECAB3-220ENST00000606699 SENP6Q9GZR1 1112 aaPredicted RBP22.51■■□□□ 1.19
NECAB3-220ENST00000606699 DDX20Q9UHI6 824 aaKnown RBP22.51■■□□□ 1.19
NECAB3-220ENST00000606699 CDK5RAP2Q96SN8 1893 aa22.5■■□□□ 1.19
NECAB3-220ENST00000606699 MDM2Q00987 491 aaPredicted RBP22.5■■□□□ 1.19
NECAB3-220ENST00000606699 MAP3K12Q12852 859 aa22.5■■□□□ 1.19
NECAB3-220ENST00000606699 MIGA1Q8NAN2 632 aa22.5■■□□□ 1.19
NECAB3-220ENST00000606699 LBHD1Q9BQE6 289 aaPredicted RBP22.5■■□□□ 1.19
NECAB3-220ENST00000606699 FLRT1Q9NZU1 646 aa22.5■■□□□ 1.19
NECAB3-220ENST00000606699 POTEB2H3BUK9 544 aa22.49■■□□□ 1.19
NECAB3-220ENST00000606699 WDR78Q5VTH9 848 aa22.49■■□□□ 1.19
NECAB3-220ENST00000606699 ITPRIPQ8IWB1 547 aa22.49■■□□□ 1.19
NECAB3-220ENST00000606699 MAGEB6Q8N7X4 407 aa22.49■■□□□ 1.19
NECAB3-220ENST00000606699 EAF2Q96CJ1 260 aaPredicted RBP22.49■■□□□ 1.19
NECAB3-220ENST00000606699 CCDC8Q9H0W5 538 aaPredicted RBP22.49■■□□□ 1.19
NECAB3-220ENST00000606699 BTBD7Q9P203 1132 aa22.49■■□□□ 1.19
NECAB3-220ENST00000606699 DNM1LO00429 736 aa22.48■■□□□ 1.19
NECAB3-220ENST00000606699 STRNO43815 780 aa22.48■■□□□ 1.19
NECAB3-220ENST00000606699 IGHA2P01877 340 aa22.48■■□□□ 1.19
NECAB3-220ENST00000606699 ACER1Q8TDN7 264 aa22.48■■□□□ 1.19
NECAB3-220ENST00000606699 HOXC10Q9NYD6 342 aa22.48■■□□□ 1.19
NECAB3-220ENST00000606699 TLR7Q9NYK1 1049 aaKnown RBP22.48■■□□□ 1.19
NECAB3-220ENST00000606699 NDUFB9Q9Y6M9 179 aa22.48■■□□□ 1.19
NECAB3-220ENST00000606699 CNGA1P29973 690 aa22.47■■□□□ 1.19
NECAB3-220ENST00000606699 RPAP3Q9H6T3 665 aaPredicted RBP22.47■■□□□ 1.19
NECAB3-220ENST00000606699 SPDYE16A6NNV3 312 aaPredicted RBP22.46■■□□□ 1.19
NECAB3-220ENST00000606699 SHMT1P34896 483 aa22.46■■□□□ 1.19
NECAB3-220ENST00000606699 COG2Q14746 738 aa22.46■■□□□ 1.19
NECAB3-220ENST00000606699 ARRDC4Q8NCT1 418 aa22.46■■□□□ 1.19
NECAB3-220ENST00000606699 NPLOC4Q8TAT6 608 aa22.46■■□□□ 1.19
NECAB3-220ENST00000606699 PRKAG2Q9UGJ0 569 aa22.46■■□□□ 1.19
NECAB3-220ENST00000606699 DNAH12Q6ZR08 3092 aa22.46■■□□□ 1.19
NECAB3-220ENST00000606699 MS4A1P11836 297 aa22.45■■□□□ 1.18
NECAB3-220ENST00000606699 PLCD1P51178 756 aa22.45■■□□□ 1.18
NECAB3-220ENST00000606699 OLFML2BQ68BL8 750 aa22.45■■□□□ 1.18
NECAB3-220ENST00000606699 DPP9Q86TI2 863 aa22.45■■□□□ 1.18
NECAB3-220ENST00000606699 POLR3DP05423 398 aaPredicted RBP22.44■■□□□ 1.18
NECAB3-220ENST00000606699 MYH1P12882 1939 aa22.44■■□□□ 1.18
NECAB3-220ENST00000606699 CYBAP13498 195 aa22.44■■□□□ 1.18
NECAB3-220ENST00000606699 CYP2C19P33261 490 aa22.44■■□□□ 1.18
NECAB3-220ENST00000606699 GUCY1A2P33402 732 aa22.44■■□□□ 1.18
NECAB3-220ENST00000606699 GABPAQ06546 454 aa22.44■■□□□ 1.18
NECAB3-220ENST00000606699 ERC1Q8IUD2 1116 aa22.44■■□□□ 1.18
NECAB3-220ENST00000606699 RIOK1Q9BRS2 568 aaKnown RBP22.44■■□□□ 1.18
NECAB3-220ENST00000606699 ANTXR1Q9H6X2 564 aa22.44■■□□□ 1.18
NECAB3-220ENST00000606699 MYO5AQ9Y4I1 1855 aaKnown RBP22.44■■□□□ 1.18
NECAB3-220ENST00000606699 ATN1P54259 1190 aaPredicted RBP22.43■■□□□ 1.18
NECAB3-220ENST00000606699 TTF1Q15361 905 aaPredicted RBP22.43■■□□□ 1.18
NECAB3-220ENST00000606699 C20orf194Q5TEA3 1177 aa22.43■■□□□ 1.18
NECAB3-220ENST00000606699 MB21D1Q8N884 522 aa22.43■■□□□ 1.18
NECAB3-220ENST00000606699 SHCBP1Q8NEM2 672 aa22.43■■□□□ 1.18
NECAB3-220ENST00000606699 TRPV1Q8NER1 839 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms