RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CSADQ9Y600 493 aa9.06□□□□□ -0.96
MSH6-211ENST00000606499 TMEM88BA6NKF7 163 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 PTPRAP18433 802 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 RPS6KB1P23443 525 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 MCM5P33992 734 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 ATP2B2Q01814 1243 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 ICA1Q05084 483 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 RCSD1Q6JBY9 416 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 RUFY3Q7L099 469 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 SAPCD2Q86UD0 394 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 IQCA1Q86XH1 822 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 ENAHQ8N8S7 591 aaPredicted RBP9.05□□□□□ -0.96
MSH6-211ENST00000606499 OTUD5Q96G74 571 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 ZSCAN10Q96SZ4 725 aaPredicted RBP9.05□□□□□ -0.96
MSH6-211ENST00000606499 UBAC1Q9BSL1 405 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 TM6SF1Q9BZW5 370 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 SENP2Q9HC62 589 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 ZSWIM6Q9HCJ5 1215 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 PICK1Q9NRD5 415 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 FOXD4L1Q9NU39 408 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 MTMR4Q9NYA4 1195 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 ABT1Q9ULW3 272 aaKnown RBP9.05□□□□□ -0.96
MSH6-211ENST00000606499 STX8Q9UNK0 236 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 CYP46A1Q9Y6A2 500 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 TLL2Q9Y6L7 1015 aa9.05□□□□□ -0.96
MSH6-211ENST00000606499 PARP14Q460N5 1801 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 A0A1W2PRG0 241 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 SPDYE5A6NIY4 337 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 USP17L5A8MUK1 530 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 SH2B2O14492 632 aaPredicted RBP9.04□□□□□ -0.96
MSH6-211ENST00000606499 IFIT3O14879 490 aaKnown RBP9.04□□□□□ -0.96
MSH6-211ENST00000606499 HMGB1P09429 215 aaKnown RBP9.04□□□□□ -0.96
MSH6-211ENST00000606499 EEF2P13639 858 aaKnown RBP9.04□□□□□ -0.96
MSH6-211ENST00000606499 PSMA5P28066 241 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 GJA5P36382 358 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 ECE1P42892 770 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 NT5C2P49902 561 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 APLP1P51693 650 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 EXOSC10Q01780 885 aaKnown RBP9.04□□□□□ -0.96
MSH6-211ENST00000606499 DGKZQ13574 1117 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 SEC23AQ15436 765 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 ZYXQ15942 572 aaKnown RBP9.04□□□□□ -0.96
MSH6-211ENST00000606499 TMEM67Q5HYA8 995 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 DHX32Q7L7V1 743 aaKnown RBP9.04□□□□□ -0.96
MSH6-211ENST00000606499 RASGRP2Q7LDG7 609 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 SIAH1Q8IUQ4 282 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 LRRC47Q8N1G4 583 aaKnown RBP9.04□□□□□ -0.96
MSH6-211ENST00000606499 ACER1Q8TDN7 264 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 OPTNQ96CV9 577 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 CLIP2Q9UDT6 1046 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 ZHX2Q9Y6X8 837 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 THSD7BQ9C0I4 1608 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 WDR19Q8NEZ3 1342 aa9.04□□□□□ -0.96
MSH6-211ENST00000606499 UNCXA6NJT0 531 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 TRIM75PA6NK02 468 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 TTLL1O95922 423 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 NOVP48745 357 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 NEK4P51957 841 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 HTRA3P83110 453 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 MKRN3Q13064 507 aaKnown RBP9.03□□□□□ -0.96
MSH6-211ENST00000606499 MTMR2Q13614 643 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 WTAPQ15007 396 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 SART3Q15020 963 aaKnown RBP9.03□□□□□ -0.96
MSH6-211ENST00000606499 Q6ZUG5 572 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 ERO1BQ86YB8 467 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 RASAL3Q86YV0 1011 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 IGDCC4Q8TDY8 1250 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 CHMP4CQ96CF2 233 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 SLC10A4Q96EP9 437 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 WNK4Q96J92 1243 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 TMEM87BQ96K49 555 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 TTC14Q96N46 770 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 FEZ1Q99689 392 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 KANSL2Q9H9L4 492 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 LY9Q9HBG7 655 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 ARHGEF10LQ9HCE6 1279 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 CREBZFQ9NS37 354 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 GINM1Q9NU53 330 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 TCP11L1Q9NUJ3 509 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 NYAP2Q9P242 653 aa9.03□□□□□ -0.96
MSH6-211ENST00000606499 ERICH2A1L162 156 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 IRF6O14896 467 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 ZNF157P51786 506 aaPredicted RBP9.02□□□□□ -0.97
MSH6-211ENST00000606499 AK2P54819 239 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 FGD1P98174 961 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 PPATQ06203 517 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 APOBRQ0VD83 1088 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 SPP2Q13103 211 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 PPIL2Q13356 520 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 TOB2Q14106 344 aaPredicted RBP9.02□□□□□ -0.97
MSH6-211ENST00000606499 RABEP1Q15276 862 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 KIAA1755Q5JYT7 1200 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 IFIT1BQ5T764 474 aaKnown RBP9.02□□□□□ -0.97
MSH6-211ENST00000606499 RGMBQ6NW40 437 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 NOL8Q76FK4 1167 aaKnown RBP9.02□□□□□ -0.97
MSH6-211ENST00000606499 DGKHQ86XP1 1220 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 ZNF280CQ8ND82 737 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 BRF1Q92994 677 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 TMEM47Q9BQJ4 181 aa9.02□□□□□ -0.97
MSH6-211ENST00000606499 LARP6Q9BRS8 491 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms