RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	DIRC2	Q96SL1	478 aa		6.99	□□□□□ -1.29
LAMA4-222	ENST00000604740	NOC4L	Q9BVI4	516 aa	Known RBP	6.99	□□□□□ -1.29
LAMA4-222	ENST00000604740	NSUN3	Q9H649	340 aa	Known RBP	6.99	□□□□□ -1.29
LAMA4-222	ENST00000604740	CORIN	Q9Y5Q5	1042 aa		6.99	□□□□□ -1.29
LAMA4-222	ENST00000604740	WASH4P	A8MWX3	477 aa		6.98	□□□□□ -1.29
LAMA4-222	ENST00000604740		F6X3S4	739 aa		6.98	□□□□□ -1.29
LAMA4-222	ENST00000604740	TSPAN15	O95858	294 aa		6.98	□□□□□ -1.29
LAMA4-222	ENST00000604740	BPNT1	O95861	308 aa		6.98	□□□□□ -1.29
LAMA4-222	ENST00000604740	ESR1	P03372	595 aa		6.98	□□□□□ -1.29
LAMA4-222	ENST00000604740	ST13	P50502	369 aa	Known RBP	6.98	□□□□□ -1.29
LAMA4-222	ENST00000604740	HK2	P52789	917 aa		6.98	□□□□□ -1.29
LAMA4-222	ENST00000604740	DAB2	P98082	770 aa		6.98	□□□□□ -1.29
LAMA4-222	ENST00000604740	XPC	Q01831	940 aa	Predicted RBP	6.98	□□□□□ -1.29
LAMA4-222	ENST00000604740	FAM13C	Q8NE31	585 aa		6.98	□□□□□ -1.29
LAMA4-222	ENST00000604740	ABHD4	Q8TB40	342 aa		6.98	□□□□□ -1.29
LAMA4-222	ENST00000604740	TMEM59L	Q9UK28	342 aa		6.98	□□□□□ -1.29
LAMA4-222	ENST00000604740	CEP131	Q9UPN4	1083 aa		6.98	□□□□□ -1.29
LAMA4-222	ENST00000604740	PLCG1	P19174	1290 aa		6.97	□□□□□ -1.29
LAMA4-222	ENST00000604740	TPP2	P29144	1249 aa	Predicted RBP	6.97	□□□□□ -1.29
LAMA4-222	ENST00000604740	BNC2	Q6ZN30	1099 aa	Predicted RBP	6.97	□□□□□ -1.29
LAMA4-222	ENST00000604740	AEBP1	Q8IUX7	1158 aa		6.97	□□□□□ -1.29
LAMA4-222	ENST00000604740	PHC3	Q8NDX5	983 aa		6.97	□□□□□ -1.29
LAMA4-222	ENST00000604740	CYB5D2	Q8WUJ1	264 aa		6.97	□□□□□ -1.29
LAMA4-222	ENST00000604740	FAM161B	Q96MY7	647 aa		6.97	□□□□□ -1.29
LAMA4-222	ENST00000604740	TOX2	Q96NM4	488 aa		6.97	□□□□□ -1.29
LAMA4-222	ENST00000604740	TRIT1	Q9H3H1	467 aa	Known RBP	6.97	□□□□□ -1.29
LAMA4-222	ENST00000604740	UPK3BL1	B0FP48	263 aa		6.96	□□□□□ -1.3
LAMA4-222	ENST00000604740	UPK3BL2	E5RIL1	263 aa		6.96	□□□□□ -1.3
LAMA4-222	ENST00000604740	ERVFC1	P60507	584 aa		6.96	□□□□□ -1.3
LAMA4-222	ENST00000604740	FBLN7	Q53RD9	439 aa		6.96	□□□□□ -1.3
LAMA4-222	ENST00000604740	FBXO15	Q8NCQ5	510 aa	Predicted RBP	6.96	□□□□□ -1.3
LAMA4-222	ENST00000604740	DUSP15	Q9H1R2	295 aa	Predicted RBP	6.96	□□□□□ -1.3
LAMA4-222	ENST00000604740	DUSP13	Q9UII6	198 aa		6.96	□□□□□ -1.3
LAMA4-222	ENST00000604740	CTSH	P09668	335 aa		6.95	□□□□□ -1.3
LAMA4-222	ENST00000604740	YARS	P54577	528 aa	Known RBP	6.95	□□□□□ -1.3
LAMA4-222	ENST00000604740	TMC4	Q7Z404	712 aa		6.95	□□□□□ -1.3
LAMA4-222	ENST00000604740	DTWD2	Q8NBA8	298 aa		6.95	□□□□□ -1.3
LAMA4-222	ENST00000604740	PPP1R13L	Q8WUF5	828 aa		6.95	□□□□□ -1.3
LAMA4-222	ENST00000604740	MYLIP	Q8WY64	445 aa		6.95	□□□□□ -1.3
LAMA4-222	ENST00000604740	KRTAP4-7	Q9BYR0	210 aa		6.95	□□□□□ -1.3
LAMA4-222	ENST00000604740	EPB41L4B	Q9H329	900 aa		6.95	□□□□□ -1.3
LAMA4-222	ENST00000604740	GPATCH2	Q9NW75	528 aa		6.95	□□□□□ -1.3
LAMA4-222	ENST00000604740	KCNH3	Q9ULD8	1083 aa		6.95	□□□□□ -1.3
LAMA4-222	ENST00000604740	NFIB	O00712	420 aa		6.94	□□□□□ -1.3
LAMA4-222	ENST00000604740	CILP	O75339	1184 aa		6.94	□□□□□ -1.3
LAMA4-222	ENST00000604740	EGR3	Q06889	387 aa		6.94	□□□□□ -1.3
LAMA4-222	ENST00000604740	CAMK2G	Q13555	558 aa	Predicted RBP	6.94	□□□□□ -1.3
LAMA4-222	ENST00000604740	CCDC84	Q86UT8	332 aa	Predicted RBP	6.94	□□□□□ -1.3
LAMA4-222	ENST00000604740	ANKLE2	Q86XL3	938 aa		6.94	□□□□□ -1.3
LAMA4-222	ENST00000604740	CILP2	Q8IUL8	1156 aa		6.94	□□□□□ -1.3
LAMA4-222	ENST00000604740	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	6.94	□□□□□ -1.3
LAMA4-222	ENST00000604740	CRELD1	Q96HD1	420 aa		6.94	□□□□□ -1.3
LAMA4-222	ENST00000604740	ADAMTS10	Q9H324	1103 aa		6.94	□□□□□ -1.3
LAMA4-222	ENST00000604740	DCP1A	Q9NPI6	582 aa	Predicted RBP	6.94	□□□□□ -1.3
LAMA4-222	ENST00000604740	USP31	Q70CQ4	1352 aa		6.94	□□□□□ -1.3
LAMA4-222	ENST00000604740	F13A1	P00488	732 aa		6.93	□□□□□ -1.3
LAMA4-222	ENST00000604740	PF4	P02776	101 aa		6.93	□□□□□ -1.3
LAMA4-222	ENST00000604740	HPX	P02790	462 aa		6.93	□□□□□ -1.3
LAMA4-222	ENST00000604740	C1QTNF9	P0C862	333 aa		6.93	□□□□□ -1.3
LAMA4-222	ENST00000604740	CFP	P27918	469 aa		6.93	□□□□□ -1.3
LAMA4-222	ENST00000604740	LTK	P29376	864 aa		6.93	□□□□□ -1.3
LAMA4-222	ENST00000604740	TNNI2	P48788	182 aa		6.93	□□□□□ -1.3
LAMA4-222	ENST00000604740	LMNB2	Q03252	620 aa		6.93	□□□□□ -1.3
LAMA4-222	ENST00000604740	GAB4	Q2WGN9	574 aa		6.93	□□□□□ -1.3
LAMA4-222	ENST00000604740	KRTAP19-4	Q3LI73	84 aa		6.93	□□□□□ -1.3
LAMA4-222	ENST00000604740	LRRC56	Q8IYG6	542 aa	Predicted RBP	6.93	□□□□□ -1.3
LAMA4-222	ENST00000604740	GATAD2B	Q8WXI9	593 aa		6.93	□□□□□ -1.3
LAMA4-222	ENST00000604740	GPR62	Q9BZJ7	368 aa		6.93	□□□□□ -1.3
LAMA4-222	ENST00000604740	KCNK12	Q9HB15	430 aa		6.93	□□□□□ -1.3
LAMA4-222	ENST00000604740	KLHL3	Q9UH77	587 aa		6.93	□□□□□ -1.3
LAMA4-222	ENST00000604740	FAM221A	A4D161	298 aa		6.92	□□□□□ -1.3
LAMA4-222	ENST00000604740	SORBS3	O60504	671 aa		6.92	□□□□□ -1.3
LAMA4-222	ENST00000604740	TRHR	P34981	398 aa	Predicted RBP	6.92	□□□□□ -1.3
LAMA4-222	ENST00000604740	TMEM201	Q5SNT2	666 aa		6.92	□□□□□ -1.3
LAMA4-222	ENST00000604740	LCE4A	Q5TA78	99 aa		6.92	□□□□□ -1.3
LAMA4-222	ENST00000604740	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	6.92	□□□□□ -1.3
LAMA4-222	ENST00000604740	TSPYL5	Q86VY4	417 aa	Predicted RBP	6.92	□□□□□ -1.3
LAMA4-222	ENST00000604740	RNF141	Q8WVD5	230 aa		6.92	□□□□□ -1.3
LAMA4-222	ENST00000604740	MRS2	Q9HD23	443 aa		6.92	□□□□□ -1.3
LAMA4-222	ENST00000604740	REV1	Q9UBZ9	1251 aa		6.92	□□□□□ -1.3
LAMA4-222	ENST00000604740	VTI1B	Q9UEU0	232 aa		6.92	□□□□□ -1.3
LAMA4-222	ENST00000604740	GRIN3B	O60391	1043 aa		6.91	□□□□□ -1.3
LAMA4-222	ENST00000604740	LRRN2	O75325	713 aa		6.91	□□□□□ -1.3
LAMA4-222	ENST00000604740	KRT1	P04264	644 aa		6.91	□□□□□ -1.3
LAMA4-222	ENST00000604740	SRF	P11831	508 aa		6.91	□□□□□ -1.3
LAMA4-222	ENST00000604740	GBP2	P32456	591 aa	Predicted RBP	6.91	□□□□□ -1.3
LAMA4-222	ENST00000604740	FAM160A1	Q05DH4	1040 aa		6.91	□□□□□ -1.3
LAMA4-222	ENST00000604740	RELL1	Q8IUW5	271 aa		6.91	□□□□□ -1.3
LAMA4-222	ENST00000604740	SLFN12	Q8IYM2	578 aa		6.91	□□□□□ -1.3
LAMA4-222	ENST00000604740	RHOV	Q96L33	236 aa		6.91	□□□□□ -1.3
LAMA4-222	ENST00000604740	PCDHA11	Q9Y5I1	949 aa		6.91	□□□□□ -1.3
LAMA4-222	ENST00000604740	TMEM253	P0C7T8	217 aa		6.9	□□□□□ -1.3
LAMA4-222	ENST00000604740	SNAP47	Q5SQN1	464 aa		6.9	□□□□□ -1.3
LAMA4-222	ENST00000604740	FBXO33	Q7Z6M2	555 aa		6.9	□□□□□ -1.3
LAMA4-222	ENST00000604740	C1QL4	Q86Z23	238 aa		6.9	□□□□□ -1.3
LAMA4-222	ENST00000604740	PDZD8	Q8NEN9	1154 aa		6.9	□□□□□ -1.3
LAMA4-222	ENST00000604740	BAHD1	Q8TBE0	780 aa	Predicted RBP	6.9	□□□□□ -1.3
LAMA4-222	ENST00000604740	SYTL4	Q96C24	671 aa	Predicted RBP	6.9	□□□□□ -1.3
LAMA4-222	ENST00000604740	KREMEN1	Q96MU8	473 aa		6.9	□□□□□ -1.3
LAMA4-222	ENST00000604740	TMEM74	Q96NL1	305 aa		6.9	□□□□□ -1.3

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