RNA–Protein interactions for RNA: ENST00000603648.1

FOCAD-208, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-208ENST00000603648 ZSCAN22P10073 491 aaPredicted RBP6.86□□□□□ -1.31
FOCAD-208ENST00000603648 SLBPQ14493 270 aaKnown RBP eCLIP6.86□□□□□ -1.31
FOCAD-208ENST00000603648 SEZ6Q53EL9 994 aa6.86□□□□□ -1.31
FOCAD-208ENST00000603648 TMEM201Q5SNT2 666 aa6.86□□□□□ -1.31
FOCAD-208ENST00000603648 NPM2Q86SE8 214 aaKnown RBP6.86□□□□□ -1.31
FOCAD-208ENST00000603648 ZAR1Q86SH2 424 aa6.86□□□□□ -1.31
FOCAD-208ENST00000603648 C1QL4Q86Z23 238 aa6.86□□□□□ -1.31
FOCAD-208ENST00000603648 SIAH1Q8IUQ4 282 aa6.86□□□□□ -1.31
FOCAD-208ENST00000603648 MRPL41Q8IXM3 137 aaKnown RBP6.86□□□□□ -1.31
FOCAD-208ENST00000603648 SHISA5Q8N114 240 aa6.86□□□□□ -1.31
FOCAD-208ENST00000603648 REXO1Q8N1G1 1221 aaKnown RBP6.86□□□□□ -1.31
FOCAD-208ENST00000603648 BHLHE22Q8NFJ8 381 aaPredicted RBP6.86□□□□□ -1.31
FOCAD-208ENST00000603648 LGR6Q9HBX8 967 aa6.86□□□□□ -1.31
FOCAD-208ENST00000603648 BRMS1Q9HCU9 246 aa6.86□□□□□ -1.31
FOCAD-208ENST00000603648 GRIN3BO60391 1043 aa6.85□□□□□ -1.31
FOCAD-208ENST00000603648 LRIG2O94898 1065 aa6.85□□□□□ -1.31
FOCAD-208ENST00000603648 HTR3BO95264 441 aa6.85□□□□□ -1.31
FOCAD-208ENST00000603648 PLCG1P19174 1290 aa6.85□□□□□ -1.31
FOCAD-208ENST00000603648 ADMP35318 185 aa6.85□□□□□ -1.31
FOCAD-208ENST00000603648 MESP2Q0VG99 397 aa6.85□□□□□ -1.31
FOCAD-208ENST00000603648 NKG7Q16617 165 aa6.85□□□□□ -1.31
FOCAD-208ENST00000603648 ATG4DQ86TL0 474 aaPredicted RBP6.85□□□□□ -1.31
FOCAD-208ENST00000603648 ACSF2Q96CM8 615 aaPredicted RBP6.85□□□□□ -1.31
FOCAD-208ENST00000603648 GPRASP2Q96D09 838 aa6.85□□□□□ -1.31
FOCAD-208ENST00000603648 SPATA32Q96LK8 384 aa6.85□□□□□ -1.31
FOCAD-208ENST00000603648 TBC1D32Q96NH3 1257 aa6.85□□□□□ -1.31
FOCAD-208ENST00000603648 EHMT1Q9H9B1 1298 aa6.85□□□□□ -1.31
FOCAD-208ENST00000603648 TJP2Q9UDY2 1190 aa6.85□□□□□ -1.31
FOCAD-208ENST00000603648 RAPGEFL1Q9UHV5 662 aa6.85□□□□□ -1.31
FOCAD-208ENST00000603648 ZNF165P49910 485 aa6.84□□□□□ -1.31
FOCAD-208ENST00000603648 CDK5R2Q13319 367 aa6.84□□□□□ -1.31
FOCAD-208ENST00000603648 COL9A2Q14055 689 aaPredicted RBP6.84□□□□□ -1.31
FOCAD-208ENST00000603648 SLC6A19Q695T7 634 aa6.84□□□□□ -1.31
FOCAD-208ENST00000603648 ARMCX6Q7L4S7 300 aa6.84□□□□□ -1.31
FOCAD-208ENST00000603648 MCATQ8IVS2 390 aaKnown RBP6.84□□□□□ -1.31
FOCAD-208ENST00000603648 TMEM87BQ96K49 555 aa6.84□□□□□ -1.31
FOCAD-208ENST00000603648 FOXQ1Q9C009 403 aa6.84□□□□□ -1.31
FOCAD-208ENST00000603648 REV1Q9UBZ9 1251 aa6.84□□□□□ -1.31
FOCAD-208ENST00000603648 PCDHB14Q9Y5E9 798 aa6.84□□□□□ -1.31
FOCAD-208ENST00000603648 CST3P01034 146 aaPredicted RBP6.83□□□□□ -1.32
FOCAD-208ENST00000603648 TNNI2P48788 182 aa6.83□□□□□ -1.32
FOCAD-208ENST00000603648 OGFOD3Q6PK18 319 aa6.83□□□□□ -1.32
FOCAD-208ENST00000603648 INPP5FQ9Y2H2 1132 aa6.83□□□□□ -1.32
FOCAD-208ENST00000603648 MCM4P33991 863 aa6.82□□□□□ -1.32
FOCAD-208ENST00000603648 SOX9P48436 509 aa6.82□□□□□ -1.32
FOCAD-208ENST00000603648 CYP27A1Q02318 531 aa6.82□□□□□ -1.32
FOCAD-208ENST00000603648 CLCQ05315 142 aa6.82□□□□□ -1.32
FOCAD-208ENST00000603648 PRAMEF13Q5VWM6 474 aa6.82□□□□□ -1.32
FOCAD-208ENST00000603648 MFSD2AQ8NA29 543 aa6.82□□□□□ -1.32
FOCAD-208ENST00000603648 TINF2Q9BSI4 451 aa6.82□□□□□ -1.32
FOCAD-208ENST00000603648 DUSP23Q9BVJ7 150 aa6.82□□□□□ -1.32
FOCAD-208ENST00000603648 PRDM10Q9NQV6 1147 aa6.82□□□□□ -1.32
FOCAD-208ENST00000603648 FAM170BA6NMN3 283 aa6.81□□□□□ -1.32
FOCAD-208ENST00000603648 DNAJA2O60884 412 aa6.81□□□□□ -1.32
FOCAD-208ENST00000603648 FAM87AP0C7U9 286 aa6.81□□□□□ -1.32
FOCAD-208ENST00000603648 GK5Q6ZS86 529 aa6.81□□□□□ -1.32
FOCAD-208ENST00000603648 SLFN12Q8IYM2 578 aa6.81□□□□□ -1.32
FOCAD-208ENST00000603648 TOP6BLQ8N6T0 577 aa6.81□□□□□ -1.32
FOCAD-208ENST00000603648 GINM1Q9NU53 330 aa6.81□□□□□ -1.32
FOCAD-208ENST00000603648 ZNRF3Q9ULT6 936 aa6.81□□□□□ -1.32
FOCAD-208ENST00000603648 SLC5A6Q9Y289 635 aa6.81□□□□□ -1.32
FOCAD-208ENST00000603648 LRRC10BA6NIK2 292 aa6.8□□□□□ -1.32
FOCAD-208ENST00000603648 MEIS3P2A8K0S8 358 aa6.8□□□□□ -1.32
FOCAD-208ENST00000603648 LEFTY1O75610 366 aa6.8□□□□□ -1.32
FOCAD-208ENST00000603648 YARSP54577 528 aaKnown RBP6.8□□□□□ -1.32
FOCAD-208ENST00000603648 CTSWP56202 376 aa6.8□□□□□ -1.32
FOCAD-208ENST00000603648 MLECQ14165 292 aa6.8□□□□□ -1.32
FOCAD-208ENST00000603648 ZNF574Q6ZN55 896 aaPredicted RBP6.8□□□□□ -1.32
FOCAD-208ENST00000603648 ZNF765Q7L2R6 523 aa6.8□□□□□ -1.32
FOCAD-208ENST00000603648 FAM13CQ8NE31 585 aa6.8□□□□□ -1.32
FOCAD-208ENST00000603648 SEC16BQ96JE7 1060 aa6.8□□□□□ -1.32
FOCAD-208ENST00000603648 CAPN10Q9HC96 672 aa6.8□□□□□ -1.32
FOCAD-208ENST00000603648 GMIPQ9P107 970 aa6.8□□□□□ -1.32
FOCAD-208ENST00000603648 SLC22A31A6NKX4 558 aa6.79□□□□□ -1.32
FOCAD-208ENST00000603648 UPK3BL1B0FP48 263 aa6.79□□□□□ -1.32
FOCAD-208ENST00000603648 CHURC1-FNTBB4DL54 471 aa6.79□□□□□ -1.32
FOCAD-208ENST00000603648 UPK3BL2E5RIL1 263 aa6.79□□□□□ -1.32
FOCAD-208ENST00000603648 SLITRK5O94991 958 aa6.79□□□□□ -1.32
FOCAD-208ENST00000603648 IMPDH2P12268 514 aa6.79□□□□□ -1.32
FOCAD-208ENST00000603648 ZC3H6P61129 1189 aaKnown RBP6.79□□□□□ -1.32
FOCAD-208ENST00000603648 CYP27C1Q4G0S4 372 aa6.79□□□□□ -1.32
FOCAD-208ENST00000603648 DUSP27Q5VZP5 1158 aa6.79□□□□□ -1.32
FOCAD-208ENST00000603648 FAM214BQ7L5A3 538 aa6.79□□□□□ -1.32
FOCAD-208ENST00000603648 DPH2Q9BQC3 489 aaPredicted RBP6.79□□□□□ -1.32
FOCAD-208ENST00000603648 RC3H2Q9HBD1 1191 aaKnown RBP6.79□□□□□ -1.32
FOCAD-208ENST00000603648 LRRC4CQ9HCJ2 640 aa6.79□□□□□ -1.32
FOCAD-208ENST00000603648 ZC3H7BQ9UGR2 993 aaKnown RBP6.79□□□□□ -1.32
FOCAD-208ENST00000603648 EFR3BQ9Y2G0 817 aa6.79□□□□□ -1.32
FOCAD-208ENST00000603648 EOMESO95936 686 aa6.78□□□□□ -1.32
FOCAD-208ENST00000603648 INHBBP09529 407 aa6.78□□□□□ -1.32
FOCAD-208ENST00000603648 ATF4P18848 351 aaPredicted RBP6.78□□□□□ -1.32
FOCAD-208ENST00000603648 GNL2Q13823 731 aaKnown RBP6.78□□□□□ -1.32
FOCAD-208ENST00000603648 LRRFIP1Q32MZ4 808 aaKnown RBP6.78□□□□□ -1.32
FOCAD-208ENST00000603648 CDCP2Q5VXM1 449 aa6.78□□□□□ -1.32
FOCAD-208ENST00000603648 OVOS1Q6IE37 1185 aa6.78□□□□□ -1.32
FOCAD-208ENST00000603648 LETMD1Q6P1Q0 360 aa6.78□□□□□ -1.32
FOCAD-208ENST00000603648 ANKLE2Q86XL3 938 aa6.78□□□□□ -1.32
FOCAD-208ENST00000603648 SLC43A3Q8NBI5 491 aa6.78□□□□□ -1.32
FOCAD-208ENST00000603648 RBBP8NLQ8NC74 664 aaPredicted RBP6.78□□□□□ -1.32
FOCAD-208ENST00000603648 CYB5D2Q8WUJ1 264 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms