RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 ANKRD13CQ8N6S4 541 aa26.22■■□□□ 1.79
PPFIA3-208ENST00000602726 PTCH2Q9Y6C5 1203 aa26.22■■□□□ 1.79
PPFIA3-208ENST00000602726 ZSWIM8A7E2V4 1837 aa26.22■■□□□ 1.79
PPFIA3-208ENST00000602726 HTTP42858 3142 aa26.22■■□□□ 1.79
PPFIA3-208ENST00000602726 SMIM22K7EJ46 135 aa26.21■■□□□ 1.79
PPFIA3-208ENST00000602726 USP14P54578 494 aa26.21■■□□□ 1.79
PPFIA3-208ENST00000602726 ZMYM1Q5SVZ6 1142 aa26.21■■□□□ 1.79
PPFIA3-208ENST00000602726 TMEM179Q6ZVK1 233 aa26.21■■□□□ 1.79
PPFIA3-208ENST00000602726 C16orf86Q6ZW13 317 aa26.21■■□□□ 1.79
PPFIA3-208ENST00000602726 ACER1Q8TDN7 264 aa26.21■■□□□ 1.79
PPFIA3-208ENST00000602726 TDO2P48775 406 aa26.2■■□□□ 1.78
PPFIA3-208ENST00000602726 SBK1Q52WX2 424 aa26.2■■□□□ 1.78
PPFIA3-208ENST00000602726 CCDC17Q96LX7 622 aa26.2■■□□□ 1.78
PPFIA3-208ENST00000602726 SEC62Q99442 399 aaKnown RBP26.2■■□□□ 1.78
PPFIA3-208ENST00000602726 KIAA1683Q9H0B3 1180 aa26.2■■□□□ 1.78
PPFIA3-208ENST00000602726 SRRDQ9UH36 339 aa26.2■■□□□ 1.78
PPFIA3-208ENST00000602726 MINDY4BA8MYZ0 360 aa26.19■■□□□ 1.78
PPFIA3-208ENST00000602726 PATL2C9JE40 543 aaKnown RBP26.19■■□□□ 1.78
PPFIA3-208ENST00000602726 AKR1B1P15121 316 aa26.19■■□□□ 1.78
PPFIA3-208ENST00000602726 RGS19P49795 217 aa26.19■■□□□ 1.78
PPFIA3-208ENST00000602726 FAM110CQ1W6H9 321 aa26.19■■□□□ 1.78
PPFIA3-208ENST00000602726 SLC9C1Q4G0N8 1177 aa26.19■■□□□ 1.78
PPFIA3-208ENST00000602726 C12orf42Q96LP6 360 aa26.19■■□□□ 1.78
PPFIA3-208ENST00000602726 MYH8P13535 1937 aa26.19■■□□□ 1.78
PPFIA3-208ENST00000602726 NBPF11Q86T75 865 aa26.18■■□□□ 1.78
PPFIA3-208ENST00000602726 ARMC5Q96C12 935 aa26.18■■□□□ 1.78
PPFIA3-208ENST00000602726 P2RX7Q99572 595 aaKnown RBP26.18■■□□□ 1.78
PPFIA3-208ENST00000602726 NACAP1Q9BZK3 213 aa26.18■■□□□ 1.78
PPFIA3-208ENST00000602726 EPB41L4AQ9HCS5 686 aaPredicted RBP26.17■■□□□ 1.78
PPFIA3-208ENST00000602726 MYPNQ86TC9 1320 aa26.16■■□□□ 1.78
PPFIA3-208ENST00000602726 TRIM6-TRIM34B2RNG4 842 aa26.16■■□□□ 1.78
PPFIA3-208ENST00000602726 HERVK_113P62684 666 aa26.16■■□□□ 1.78
PPFIA3-208ENST00000602726 PLEKHM2Q8IWE5 1019 aa26.16■■□□□ 1.78
PPFIA3-208ENST00000602726 IFNL3Q8IZI9 196 aa26.16■■□□□ 1.78
PPFIA3-208ENST00000602726 RAET1EQ8TD07 263 aa26.16■■□□□ 1.78
PPFIA3-208ENST00000602726 USP17L15C9J2P7 530 aa26.15■■□□□ 1.78
PPFIA3-208ENST00000602726 USP17L13C9JLJ4 530 aa26.15■■□□□ 1.78
PPFIA3-208ENST00000602726 USP17L11C9JVI0 530 aa26.15■■□□□ 1.78
PPFIA3-208ENST00000602726 USP17L18D6R9N7 530 aa26.15■■□□□ 1.78
PPFIA3-208ENST00000602726 USP17L22D6RA61 530 aa26.15■■□□□ 1.78
PPFIA3-208ENST00000602726 USP17L17D6RBQ6 530 aa26.15■■□□□ 1.78
PPFIA3-208ENST00000602726 USP17L19D6RCP7 530 aa26.15■■□□□ 1.78
PPFIA3-208ENST00000602726 USP17L20D6RJB6 530 aa26.15■■□□□ 1.78
PPFIA3-208ENST00000602726 TNPO2O14787 897 aaKnown RBP26.15■■□□□ 1.78
PPFIA3-208ENST00000602726 USP17L24Q0WX57 530 aa26.15■■□□□ 1.78
PPFIA3-208ENST00000602726 STK11IPQ8N1F8 1099 aa26.15■■□□□ 1.78
PPFIA3-208ENST00000602726 MKNK2Q9HBH9 465 aa26.15■■□□□ 1.78
PPFIA3-208ENST00000602726 ARHGEF10LQ9HCE6 1279 aa26.15■■□□□ 1.78
PPFIA3-208ENST00000602726 MGAMO43451 1857 aa26.15■■□□□ 1.78
PPFIA3-208ENST00000602726 A0A1W2PRG0 241 aa26.14■■□□□ 1.78
PPFIA3-208ENST00000602726 VCAM1P19320 739 aa26.14■■□□□ 1.78
PPFIA3-208ENST00000602726 MLLT1Q03111 559 aaPredicted RBP26.14■■□□□ 1.78
PPFIA3-208ENST00000602726 ICA1Q05084 483 aa26.14■■□□□ 1.78
PPFIA3-208ENST00000602726 TICAM2Q86XR7 235 aa26.14■■□□□ 1.78
PPFIA3-208ENST00000602726 RILPL2Q969X0 211 aa26.14■■□□□ 1.78
PPFIA3-208ENST00000602726 OSBPL3Q9H4L5 887 aa26.14■■□□□ 1.78
PPFIA3-208ENST00000602726 PRKCZQ05513 592 aa26.13■■□□□ 1.77
PPFIA3-208ENST00000602726 CCDC129Q6ZRS4 1044 aa26.13■■□□□ 1.77
PPFIA3-208ENST00000602726 SH3TC2Q8TF17 1288 aa26.13■■□□□ 1.77
PPFIA3-208ENST00000602726 GTF3C2Q8WUA4 911 aaPredicted RBP26.13■■□□□ 1.77
PPFIA3-208ENST00000602726 COA7Q96BR5 231 aa26.13■■□□□ 1.77
PPFIA3-208ENST00000602726 NAPBQ9H115 298 aa26.13■■□□□ 1.77
PPFIA3-208ENST00000602726 SH2D4AQ9H788 454 aa26.13■■□□□ 1.77
PPFIA3-208ENST00000602726 HELLSQ9NRZ9 838 aa26.13■■□□□ 1.77
PPFIA3-208ENST00000602726 MORF4L1Q9UBU8 362 aa26.13■■□□□ 1.77
PPFIA3-208ENST00000602726 CENPFP49454 3210 aa26.12■■□□□ 1.77
PPFIA3-208ENST00000602726 ROBO3Q96MS0 1386 aa26.12■■□□□ 1.77
PPFIA3-208ENST00000602726 CATSPERGQ6ZRH7 1159 aa26.12■■□□□ 1.77
PPFIA3-208ENST00000602726 CLEC10AQ8IUN9 316 aa26.12■■□□□ 1.77
PPFIA3-208ENST00000602726 GPRC5AQ8NFJ5 357 aa26.12■■□□□ 1.77
PPFIA3-208ENST00000602726 ZNF333Q96JL9 665 aa26.12■■□□□ 1.77
PPFIA3-208ENST00000602726 KANSL2Q9H9L4 492 aa26.12■■□□□ 1.77
PPFIA3-208ENST00000602726 ZNF287Q9HBT7 754 aa26.12■■□□□ 1.77
PPFIA3-208ENST00000602726 RPAP3Q9H6T3 665 aaPredicted RBP26.11■■□□□ 1.77
PPFIA3-208ENST00000602726 GABRQQ9UN88 632 aa26.11■■□□□ 1.77
PPFIA3-208ENST00000602726 RASA1P20936 1047 aa26.1■■□□□ 1.77
PPFIA3-208ENST00000602726 ATP2B2Q01814 1243 aa26.1■■□□□ 1.77
PPFIA3-208ENST00000602726 SIAH1Q8IUQ4 282 aa26.1■■□□□ 1.77
PPFIA3-208ENST00000602726 FAM227BQ96M60 508 aa26.1■■□□□ 1.77
PPFIA3-208ENST00000602726 TXNRD2Q9NNW7 524 aa26.1■■□□□ 1.77
PPFIA3-208ENST00000602726 RBPJLQ9UBG7 517 aa26.1■■□□□ 1.77
PPFIA3-208ENST00000602726 TMX2Q9Y320 296 aa26.1■■□□□ 1.77
PPFIA3-208ENST00000602726 KIAA0100Q14667 2235 aaKnown RBP26.1■■□□□ 1.77
PPFIA3-208ENST00000602726 SLC3A2P08195 630 aaKnown RBP26.09■■□□□ 1.77
PPFIA3-208ENST00000602726 GRK4P32298 578 aa26.09■■□□□ 1.77
PPFIA3-208ENST00000602726 FLT3LGP49771 235 aa26.09■■□□□ 1.77
PPFIA3-208ENST00000602726 MCMDC2Q4G0Z9 681 aa26.09■■□□□ 1.77
PPFIA3-208ENST00000602726 ZNF444Q8N0Y2 327 aaPredicted RBP26.09■■□□□ 1.77
PPFIA3-208ENST00000602726 PAGR1Q9BTK6 254 aa26.09■■□□□ 1.77
PPFIA3-208ENST00000602726 TMEM106CQ9BVX2 250 aa26.09■■□□□ 1.77
PPFIA3-208ENST00000602726 PEX10O60683 326 aa26.08■■□□□ 1.77
PPFIA3-208ENST00000602726 MYCP01106 439 aaPredicted RBP26.08■■□□□ 1.77
PPFIA3-208ENST00000602726 EEF2P13639 858 aaKnown RBP26.08■■□□□ 1.77
PPFIA3-208ENST00000602726 LPAR1Q92633 364 aa26.08■■□□□ 1.77
PPFIA3-208ENST00000602726 A0A0D9SFI3 127 aa26.07■■□□□ 1.76
PPFIA3-208ENST00000602726 PRDM1O75626 825 aa26.07■■□□□ 1.76
PPFIA3-208ENST00000602726 ERVK-9P63128 1117 aa26.07■■□□□ 1.76
PPFIA3-208ENST00000602726 ERVK-24P63145 666 aa26.07■■□□□ 1.76
PPFIA3-208ENST00000602726 PPARAQ07869 468 aa26.07■■□□□ 1.76
PPFIA3-208ENST00000602726 NMIQ13287 307 aaPredicted RBP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms