RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 CLASRPQ8N2M8 674 aaKnown RBP9.93□□□□□ -0.82
COMMD3-215ENST00000602574 BCAS4Q8TDM0 211 aa9.93□□□□□ -0.82
COMMD3-215ENST00000602574 SNX27Q96L92 541 aa9.93□□□□□ -0.82
COMMD3-215ENST00000602574 TTC14Q96N46 770 aa9.93□□□□□ -0.82
COMMD3-215ENST00000602574 RBM42Q9BTD8 480 aaKnown RBP9.93□□□□□ -0.82
COMMD3-215ENST00000602574 HESX1Q9UBX0 185 aa9.93□□□□□ -0.82
COMMD3-215ENST00000602574 LRRD1A4D1F6 860 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 TMEM247A6NEH6 219 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 FAM25EA8MYX2 175 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 MGEA5O60502 916 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 GFPT2O94808 682 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 PDHBP11177 359 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 LMNB2Q03252 620 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 XRCC4Q13426 336 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 TUBB2AQ13885 445 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 SUZ12Q15022 739 aaKnown RBP9.92□□□□□ -0.82
COMMD3-215ENST00000602574 MAP7D1Q3KQU3 841 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.92□□□□□ -0.82
COMMD3-215ENST00000602574 E4F1Q66K89 784 aaPredicted RBP9.92□□□□□ -0.82
COMMD3-215ENST00000602574 FCHSD1Q86WN1 690 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 TUBB2BQ9BVA1 445 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 EIF2AQ9BY44 585 aaKnown RBP9.92□□□□□ -0.82
COMMD3-215ENST00000602574 GPBP1L1Q9HC44 474 aaPredicted RBP9.92□□□□□ -0.82
COMMD3-215ENST00000602574 PCMTD2Q9NV79 361 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 ANO10Q9NW15 660 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 SLAIN2Q9P270 581 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 TFIP11Q9UBB9 837 aaKnown RBP9.92□□□□□ -0.82
COMMD3-215ENST00000602574 ABCA8O94911 1581 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 IFT140Q96RY7 1462 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 MYO3AQ8NEV4 1616 aa9.92□□□□□ -0.82
COMMD3-215ENST00000602574 ANKRD62A6NC57 917 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 ARID3CA6NKF2 412 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 HOXD11P31277 338 aaPredicted RBP9.91□□□□□ -0.82
COMMD3-215ENST00000602574 MRPS35P82673 323 aaKnown RBP9.91□□□□□ -0.82
COMMD3-215ENST00000602574 PPIDQ08752 370 aaKnown RBP9.91□□□□□ -0.82
COMMD3-215ENST00000602574 CASP8Q14790 479 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 IQCEQ6IPM2 695 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 GIGYF2Q6Y7W6 1299 aaKnown RBP9.91□□□□□ -0.82
COMMD3-215ENST00000602574 ZGPATQ8N5A5 531 aaKnown RBP9.91□□□□□ -0.82
COMMD3-215ENST00000602574 NSUN7Q8NE18 718 aaKnown RBP9.91□□□□□ -0.82
COMMD3-215ENST00000602574 GSDMAQ96QA5 445 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 BPIFA3Q9BQP9 254 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 NACAP1Q9BZK3 213 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 SSX2IPQ9Y2D8 614 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 GRIN2DO15399 1336 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 N4BP1O75113 896 aaKnown RBP9.91□□□□□ -0.82
COMMD3-215ENST00000602574 CCNG1P51959 295 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 PPP2R3AQ06190 1150 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 BCL2A1Q16548 175 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 ANKRD13DQ6ZTN6 518 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 SYT2Q8N9I0 419 aaPredicted RBP9.91□□□□□ -0.82
COMMD3-215ENST00000602574 C1orf131Q8NDD1 294 aaKnown RBP9.91□□□□□ -0.82
COMMD3-215ENST00000602574 SMARCC2Q8TAQ2 1214 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 CLIP3Q96DZ5 547 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 NAF1Q96HR8 494 aaKnown RBP9.91□□□□□ -0.82
COMMD3-215ENST00000602574 PREBQ9HCU5 417 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 PRELID1Q9Y255 219 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 SLC4A7Q9Y6M7 1214 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 UBN2Q6ZU65 1347 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 MYPNQ86TC9 1320 aa9.91□□□□□ -0.82
COMMD3-215ENST00000602574 TCHHQ07283 1943 aa9.9□□□□□ -0.82
COMMD3-215ENST00000602574 A0A1B0GVG6 124 aa9.9□□□□□ -0.82
COMMD3-215ENST00000602574 LSM1O15116 133 aaKnown RBP9.9□□□□□ -0.82
COMMD3-215ENST00000602574 PRC1O43663 620 aa9.9□□□□□ -0.82
COMMD3-215ENST00000602574 BUB1BO60566 1050 aaPredicted RBP9.9□□□□□ -0.82
COMMD3-215ENST00000602574 TBCAO75347 108 aaKnown RBP9.9□□□□□ -0.82
COMMD3-215ENST00000602574 MATR3P43243 847 aaKnown RBP eCLIP9.9□□□□□ -0.82
COMMD3-215ENST00000602574 TUBA1BP68363 451 aa9.9□□□□□ -0.82
COMMD3-215ENST00000602574 KIF5AQ12840 1032 aa9.9□□□□□ -0.82
COMMD3-215ENST00000602574 CAMK2BQ13554 666 aa9.9□□□□□ -0.82
COMMD3-215ENST00000602574 COBLL1Q53SF7 1204 aa9.9□□□□□ -0.82
COMMD3-215ENST00000602574 CFAP157Q5JU67 520 aa9.9□□□□□ -0.82
COMMD3-215ENST00000602574 RBM43Q6ZSC3 357 aaKnown RBP9.9□□□□□ -0.82
COMMD3-215ENST00000602574 TUBA1AQ71U36 451 aa9.9□□□□□ -0.82
COMMD3-215ENST00000602574 NUP58Q9BVL2 599 aa9.9□□□□□ -0.82
COMMD3-215ENST00000602574 PUS3Q9BZE2 481 aaKnown RBP9.9□□□□□ -0.82
COMMD3-215ENST00000602574 IFT122Q9HBG6 1241 aa9.9□□□□□ -0.82
COMMD3-215ENST00000602574 NOP53Q9NZM5 478 aaKnown RBP9.9□□□□□ -0.82
COMMD3-215ENST00000602574 PRG4Q92954 1404 aaPredicted RBP9.9□□□□□ -0.82
COMMD3-215ENST00000602574 MLH1P40692 756 aa9.9□□□□□ -0.83
COMMD3-215ENST00000602574 CD97P48960 835 aa9.9□□□□□ -0.83
COMMD3-215ENST00000602574 SKOR1P84550 965 aa9.9□□□□□ -0.83
COMMD3-215ENST00000602574 BOLA3Q53S33 107 aa9.9□□□□□ -0.83
COMMD3-215ENST00000602574 ADALQ6DHV7 355 aa9.9□□□□□ -0.83
COMMD3-215ENST00000602574 PI16Q6UXB8 463 aa9.9□□□□□ -0.83
COMMD3-215ENST00000602574 NEK10Q6ZWH5 1172 aa9.9□□□□□ -0.83
COMMD3-215ENST00000602574 BPHLQ86WA6 291 aaPredicted RBP9.9□□□□□ -0.83
COMMD3-215ENST00000602574 PANK1Q8TE04 598 aa9.9□□□□□ -0.83
COMMD3-215ENST00000602574 JAKMIP1Q96N16 626 aaKnown RBP9.9□□□□□ -0.83
COMMD3-215ENST00000602574 CBX8Q9HC52 389 aa9.9□□□□□ -0.83
COMMD3-215ENST00000602574 SLC5A4Q9NY91 659 aa9.9□□□□□ -0.83
COMMD3-215ENST00000602574 IQSEC2Q5JU85 1478 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 CDC45O75419 566 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 TYRO3Q06418 890 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 BYSLQ13895 437 aaKnown RBP9.89□□□□□ -0.83
COMMD3-215ENST00000602574 ALDH1L2Q3SY69 923 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 TRIM65Q6PJ69 517 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 PPP1R14CQ8TAE6 165 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 DEPTORQ8TB45 409 aa9.89□□□□□ -0.83
COMMD3-215ENST00000602574 ACMSDQ8TDX5 336 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms