RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 ZYXQ15942 572 aaKnown RBP20.18■□□□□ 0.82
NOTCH3-205ENST00000600841 GIMAP6Q6P9H5 292 aa20.18■□□□□ 0.82
NOTCH3-205ENST00000600841 CTR9Q6PD62 1173 aa20.18■□□□□ 0.82
NOTCH3-205ENST00000600841 ACER1Q8TDN7 264 aa20.18■□□□□ 0.82
NOTCH3-205ENST00000600841 ZNF333Q96JL9 665 aa20.18■□□□□ 0.82
NOTCH3-205ENST00000600841 C12orf42Q96LP6 360 aa20.18■□□□□ 0.82
NOTCH3-205ENST00000600841 KIAA1683Q9H0B3 1180 aa20.18■□□□□ 0.82
NOTCH3-205ENST00000600841 ARPP21Q9UBL0 812 aaPredicted RBP20.18■□□□□ 0.82
NOTCH3-205ENST00000600841 STAP2Q9UGK3 403 aa20.18■□□□□ 0.82
NOTCH3-205ENST00000600841 BRCA2P51587 3418 aa20.18■□□□□ 0.82
NOTCH3-205ENST00000600841 M0R2C6 588 aa20.17■□□□□ 0.82
NOTCH3-205ENST00000600841 TNPO2O14787 897 aaKnown RBP20.17■□□□□ 0.82
NOTCH3-205ENST00000600841 PDE1AP54750 535 aa20.17■□□□□ 0.82
NOTCH3-205ENST00000600841 TMEM179Q6ZVK1 233 aa20.17■□□□□ 0.82
NOTCH3-205ENST00000600841 C16orf86Q6ZW13 317 aa20.17■□□□□ 0.82
NOTCH3-205ENST00000600841 SMC5Q8IY18 1101 aa20.17■□□□□ 0.82
NOTCH3-205ENST00000600841 SH3TC2Q8TF17 1288 aa20.17■□□□□ 0.82
NOTCH3-205ENST00000600841 P2RX7Q99572 595 aaKnown RBP20.17■□□□□ 0.82
NOTCH3-205ENST00000600841 LNPKQ9C0E8 428 aa20.17■□□□□ 0.82
NOTCH3-205ENST00000600841 DOCK3Q8IZD9 2030 aa20.17■□□□□ 0.82
NOTCH3-205ENST00000600841 TNRC18O15417 2968 aaPredicted RBP20.16■□□□□ 0.82
NOTCH3-205ENST00000600841 GSG1L2A8MUP6 293 aa20.16■□□□□ 0.82
NOTCH3-205ENST00000600841 CDK8P49336 464 aa20.16■□□□□ 0.82
NOTCH3-205ENST00000600841 HERVK_113P62684 666 aa20.16■□□□□ 0.82
NOTCH3-205ENST00000600841 PRKCZQ05513 592 aa20.16■□□□□ 0.82
NOTCH3-205ENST00000600841 CCDC17Q96LX7 622 aa20.16■□□□□ 0.82
NOTCH3-205ENST00000600841 TMEM106CQ9BVX2 250 aa20.16■□□□□ 0.82
NOTCH3-205ENST00000600841 SMIM22K7EJ46 135 aa20.15■□□□□ 0.82
NOTCH3-205ENST00000600841 SBK1Q52WX2 424 aa20.15■□□□□ 0.82
NOTCH3-205ENST00000600841 B4GALNT3Q6L9W6 998 aa20.15■□□□□ 0.82
NOTCH3-205ENST00000600841 GTF3C2Q8WUA4 911 aaPredicted RBP20.15■□□□□ 0.82
NOTCH3-205ENST00000600841 COA7Q96BR5 231 aa20.15■□□□□ 0.82
NOTCH3-205ENST00000600841 MORF4L1Q9UBU8 362 aa20.15■□□□□ 0.82
NOTCH3-205ENST00000600841 RBBP6Q7Z6E9 1792 aaKnown RBP20.15■□□□□ 0.82
NOTCH3-205ENST00000600841 USP17L15C9J2P7 530 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 USP17L13C9JLJ4 530 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 USP17L11C9JVI0 530 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 USP17L18D6R9N7 530 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 USP17L22D6RA61 530 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 USP17L17D6RBQ6 530 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 USP17L19D6RCP7 530 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 USP17L20D6RJB6 530 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 IGHDP01880 384 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 APPP05067 770 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 AKR1B1P15121 316 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 VCAM1P19320 739 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 TDO2P48775 406 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 USP17L24Q0WX57 530 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 ZMYM1Q5SVZ6 1142 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 EVI5LQ96CN4 794 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 GABRQQ9UN88 632 aa20.14■□□□□ 0.81
NOTCH3-205ENST00000600841 POTEFA5A3E0 1075 aa20.13■□□□□ 0.81
NOTCH3-205ENST00000600841 MINDY4BA8MYZ0 360 aa20.13■□□□□ 0.81
NOTCH3-205ENST00000600841 PATL2C9JE40 543 aaKnown RBP20.13■□□□□ 0.81
NOTCH3-205ENST00000600841 GRK4P32298 578 aa20.13■□□□□ 0.81
NOTCH3-205ENST00000600841 FLT3LGP49771 235 aa20.13■□□□□ 0.81
NOTCH3-205ENST00000600841 GPRC5AQ8NFJ5 357 aa20.13■□□□□ 0.81
NOTCH3-205ENST00000600841 SEC62Q99442 399 aaKnown RBP20.13■□□□□ 0.81
NOTCH3-205ENST00000600841 NACAP1Q9BZK3 213 aa20.13■□□□□ 0.81
NOTCH3-205ENST00000600841 ARHGEF10LQ9HCE6 1279 aa20.13■□□□□ 0.81
NOTCH3-205ENST00000600841 PDE4DIPQ5VU43 2346 aa20.12■□□□□ 0.81
NOTCH3-205ENST00000600841 A0A1W2PRG0 241 aa20.12■□□□□ 0.81
NOTCH3-205ENST00000600841 MYCP01106 439 aaPredicted RBP20.12■□□□□ 0.81
NOTCH3-205ENST00000600841 NUCB1Q02818 461 aa20.12■□□□□ 0.81
NOTCH3-205ENST00000600841 ICA1Q05084 483 aa20.12■□□□□ 0.81
NOTCH3-205ENST00000600841 CATSPERGQ6ZRH7 1159 aa20.12■□□□□ 0.81
NOTCH3-205ENST00000600841 CHD1LQ86WJ1 897 aa20.12■□□□□ 0.81
NOTCH3-205ENST00000600841 SLAIN1Q8ND83 568 aa20.12■□□□□ 0.81
NOTCH3-205ENST00000600841 SH2D4AQ9H788 454 aa20.12■□□□□ 0.81
NOTCH3-205ENST00000600841 EPB41L4AQ9HCS5 686 aaPredicted RBP20.12■□□□□ 0.81
NOTCH3-205ENST00000600841 BIN2Q9UBW5 565 aaPredicted RBP20.12■□□□□ 0.81
NOTCH3-205ENST00000600841 MKI67P46013 3256 aaKnown RBP20.12■□□□□ 0.81
NOTCH3-205ENST00000600841 IRF5Q13568 498 aa20.11■□□□□ 0.81
NOTCH3-205ENST00000600841 PAGR1Q9BTK6 254 aa20.11■□□□□ 0.81
NOTCH3-205ENST00000600841 RPAP3Q9H6T3 665 aaPredicted RBP20.11■□□□□ 0.81
NOTCH3-205ENST00000600841 MKNK2Q9HBH9 465 aa20.11■□□□□ 0.81
NOTCH3-205ENST00000600841 TXNRD2Q9NNW7 524 aa20.11■□□□□ 0.81
NOTCH3-205ENST00000600841 RBPJLQ9UBG7 517 aa20.11■□□□□ 0.81
NOTCH3-205ENST00000600841 ROBO3Q96MS0 1386 aa20.1■□□□□ 0.81
NOTCH3-205ENST00000600841 ADCY3O60266 1144 aa20.1■□□□□ 0.81
NOTCH3-205ENST00000600841 ERVK-9P63128 1117 aa20.1■□□□□ 0.81
NOTCH3-205ENST00000600841 ERVK-24P63145 666 aa20.1■□□□□ 0.81
NOTCH3-205ENST00000600841 CLEC10AQ8IUN9 316 aa20.1■□□□□ 0.81
NOTCH3-205ENST00000600841 IFNL3Q8IZI9 196 aa20.1■□□□□ 0.81
NOTCH3-205ENST00000600841 STK11IPQ8N1F8 1099 aa20.1■□□□□ 0.81
NOTCH3-205ENST00000600841 KANSL2Q9H9L4 492 aa20.1■□□□□ 0.81
NOTCH3-205ENST00000600841 PEX10O60683 326 aa20.09■□□□□ 0.81
NOTCH3-205ENST00000600841 UBXN2AP68543 259 aa20.09■□□□□ 0.81
NOTCH3-205ENST00000600841 SIAH1Q8IUQ4 282 aa20.09■□□□□ 0.81
NOTCH3-205ENST00000600841 CCAR1Q8IX12 1150 aaKnown RBP20.09■□□□□ 0.81
NOTCH3-205ENST00000600841 LPAR1Q92633 364 aa20.09■□□□□ 0.81
NOTCH3-205ENST00000600841 NAPBQ9H115 298 aa20.09■□□□□ 0.81
NOTCH3-205ENST00000600841 ZNF287Q9HBT7 754 aa20.09■□□□□ 0.81
NOTCH3-205ENST00000600841 TMX2Q9Y320 296 aa20.09■□□□□ 0.81
NOTCH3-205ENST00000600841 RABGAP1Q9Y3P9 1069 aa20.09■□□□□ 0.81
NOTCH3-205ENST00000600841 TRIM6-TRIM34B2RNG4 842 aa20.08■□□□□ 0.81
NOTCH3-205ENST00000600841 EN2P19622 333 aaPredicted RBP20.08■□□□□ 0.81
NOTCH3-205ENST00000600841 ATP2B2Q01814 1243 aa20.08■□□□□ 0.81
NOTCH3-205ENST00000600841 TICAM2Q86XR7 235 aa20.08■□□□□ 0.81
NOTCH3-205ENST00000600841 PXYLP1Q8TE99 480 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms