RNA–Protein interactions for RNA: ENST00000596351.5

LTBP4-215, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-215ENST00000596351 CRNKL1Q9BZJ0 848 aaKnown RBP14.65□□□□□ -0.06
LTBP4-215ENST00000596351 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.65□□□□□ -0.06
LTBP4-215ENST00000596351 PORCNQ9H237 461 aa14.65□□□□□ -0.06
LTBP4-215ENST00000596351 BOLA2Q9H3K6 86 aa14.65□□□□□ -0.06
LTBP4-215ENST00000596351 SZT2Q5T011 3432 aa14.64□□□□□ -0.07
LTBP4-215ENST00000596351 RLFQ13129 1914 aa14.64□□□□□ -0.07
LTBP4-215ENST00000596351 SMARCA5O60264 1052 aaPredicted RBP14.64□□□□□ -0.07
LTBP4-215ENST00000596351 RAB11FIP3O75154 756 aa14.64□□□□□ -0.07
LTBP4-215ENST00000596351 GUCY1A2P33402 732 aa14.64□□□□□ -0.07
LTBP4-215ENST00000596351 TMED8Q6PL24 325 aaPredicted RBP14.64□□□□□ -0.07
LTBP4-215ENST00000596351 DIS3LQ8TF46 1054 aaKnown RBP14.64□□□□□ -0.07
LTBP4-215ENST00000596351 ARMT1Q9H993 441 aa14.64□□□□□ -0.07
LTBP4-215ENST00000596351 PAG1Q9NWQ8 432 aa14.64□□□□□ -0.07
LTBP4-215ENST00000596351 MCM9Q9NXL9 1143 aa14.64□□□□□ -0.07
LTBP4-215ENST00000596351 PARP14Q460N5 1801 aa14.64□□□□□ -0.07
LTBP4-215ENST00000596351 VCAM1P19320 739 aa14.63□□□□□ -0.07
LTBP4-215ENST00000596351 FXR1P51114 621 aaKnown RBP eCLIP14.63□□□□□ -0.071e-7■■■■□ 21.4
LTBP4-215ENST00000596351 ERVK-9P63128 1117 aa14.63□□□□□ -0.07
LTBP4-215ENST00000596351 ERVK-24P63145 666 aa14.63□□□□□ -0.07
LTBP4-215ENST00000596351 GABPAQ06546 454 aa14.63□□□□□ -0.07
LTBP4-215ENST00000596351 SEPT2Q15019 361 aa14.63□□□□□ -0.07
LTBP4-215ENST00000596351 CHRDL2Q6WN34 429 aa14.63□□□□□ -0.07
LTBP4-215ENST00000596351 SLC44A5Q8NCS7 719 aa14.63□□□□□ -0.07
LTBP4-215ENST00000596351 C12orf42Q96LP6 360 aa14.63□□□□□ -0.07
LTBP4-215ENST00000596351 HTATIP2Q9BUP3 242 aa14.63□□□□□ -0.07
LTBP4-215ENST00000596351 DCP1AQ9NPI6 582 aaPredicted RBP14.63□□□□□ -0.07
LTBP4-215ENST00000596351 A0A0G2JMZ2 1700 aa14.63□□□□□ -0.07
LTBP4-215ENST00000596351 SMIM22K7EJ46 135 aa14.62□□□□□ -0.07
LTBP4-215ENST00000596351 MPHOSPH10O00566 681 aaKnown RBP14.62□□□□□ -0.07
LTBP4-215ENST00000596351 PRKAB2O43741 272 aa14.62□□□□□ -0.07
LTBP4-215ENST00000596351 CNMDO75829 334 aa14.62□□□□□ -0.07
LTBP4-215ENST00000596351 MBD4O95243 580 aa14.62□□□□□ -0.07
LTBP4-215ENST00000596351 ATP5JP18859 108 aa14.62□□□□□ -0.07
LTBP4-215ENST00000596351 DYNLL2Q96FJ2 89 aa14.62□□□□□ -0.07
LTBP4-215ENST00000596351 KIAA1683Q9H0B3 1180 aa14.62□□□□□ -0.07
LTBP4-215ENST00000596351 CRISPLD2Q9H0B8 497 aa14.62□□□□□ -0.07
LTBP4-215ENST00000596351 CABP5Q9NP86 173 aa14.62□□□□□ -0.07
LTBP4-215ENST00000596351 COL11A1P12107 1806 aaPredicted RBP14.62□□□□□ -0.07
LTBP4-215ENST00000596351 USP17L15C9J2P7 530 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 USP17L13C9JLJ4 530 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 USP17L11C9JVI0 530 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 USP17L18D6R9N7 530 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 USP17L22D6RA61 530 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 USP17L17D6RBQ6 530 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 USP17L19D6RCP7 530 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 USP17L20D6RJB6 530 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 PRKAR2AP13861 404 aaKnown RBP14.61□□□□□ -0.07
LTBP4-215ENST00000596351 MAPK4P31152 587 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 ADD2P35612 726 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 USP14P54578 494 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 USP17L24Q0WX57 530 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 CCL14Q16627 93 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 GPR142Q7Z601 462 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 CLEC10AQ8IUN9 316 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 CCAR1Q8IX12 1150 aaKnown RBP14.61□□□□□ -0.07
LTBP4-215ENST00000596351 SOCS4Q8WXH5 440 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 PAWRQ96IZ0 340 aaKnown RBP14.61□□□□□ -0.07
LTBP4-215ENST00000596351 HAUS7Q99871 368 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 NUDT12Q9BQG2 462 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 HMX1Q9NP08 348 aaPredicted RBP14.61□□□□□ -0.07
LTBP4-215ENST00000596351 RPTORQ8N122 1335 aa14.61□□□□□ -0.07
LTBP4-215ENST00000596351 CYP2D7A0A087X1C5 515 aa14.6□□□□□ -0.07
LTBP4-215ENST00000596351 A0A1W2PRG0 241 aa14.6□□□□□ -0.07
LTBP4-215ENST00000596351 PDE3AQ14432 1141 aa14.6□□□□□ -0.07
LTBP4-215ENST00000596351 CATSPERGQ6ZRH7 1159 aa14.6□□□□□ -0.07
LTBP4-215ENST00000596351 PLEKHH3Q7Z736 793 aa14.6□□□□□ -0.07
LTBP4-215ENST00000596351 GTF3C2Q8WUA4 911 aaPredicted RBP14.6□□□□□ -0.07
LTBP4-215ENST00000596351 USP6NLQ92738 828 aa14.6□□□□□ -0.07
LTBP4-215ENST00000596351 LRRCC1Q9C099 1032 aa14.6□□□□□ -0.07
LTBP4-215ENST00000596351 CHMP4BQ9H444 224 aaKnown RBP14.6□□□□□ -0.07
LTBP4-215ENST00000596351 RPAP3Q9H6T3 665 aaPredicted RBP14.6□□□□□ -0.07
LTBP4-215ENST00000596351 DNAH12Q6ZR08 3092 aa14.6□□□□□ -0.07
LTBP4-215ENST00000596351 SPDYE16A6NNV3 312 aaPredicted RBP14.59□□□□□ -0.07
LTBP4-215ENST00000596351 ZKSCAN1P17029 563 aaPredicted RBP14.59□□□□□ -0.07
LTBP4-215ENST00000596351 MORN1Q5T089 497 aa14.59□□□□□ -0.07
LTBP4-215ENST00000596351 MAP3K21Q5TCX8 1036 aa14.59□□□□□ -0.07
LTBP4-215ENST00000596351 WDR78Q5VTH9 848 aa14.59□□□□□ -0.07
LTBP4-215ENST00000596351 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.59□□□□□ -0.075e-11■■■■□ 23.7
LTBP4-215ENST00000596351 CWC22Q9HCG8 908 aaKnown RBP14.59□□□□□ -0.07
LTBP4-215ENST00000596351 BTBD7Q9P203 1132 aa14.59□□□□□ -0.07
LTBP4-215ENST00000596351 PCDH10Q9P2E7 1040 aa14.59□□□□□ -0.07
LTBP4-215ENST00000596351 RBM27Q9P2N5 1060 aaKnown RBP14.59□□□□□ -0.07
LTBP4-215ENST00000596351 RABGAP1Q9Y3P9 1069 aa14.59□□□□□ -0.07
LTBP4-215ENST00000596351 LAMA3Q16787 3333 aa14.58□□□□□ -0.07
LTBP4-215ENST00000596351 EVI5O60447 810 aa14.58□□□□□ -0.08
LTBP4-215ENST00000596351 XRCC5P13010 732 aaKnown RBP14.58□□□□□ -0.08
LTBP4-215ENST00000596351 AKR1B1P15121 316 aa14.58□□□□□ -0.08
LTBP4-215ENST00000596351 MNX1P50219 401 aaPredicted RBP14.58□□□□□ -0.08
LTBP4-215ENST00000596351 CACNB2Q08289 660 aaPredicted RBP14.58□□□□□ -0.08
LTBP4-215ENST00000596351 KIAA1755Q5JYT7 1200 aa14.58□□□□□ -0.08
LTBP4-215ENST00000596351 TSHZ3Q63HK5 1081 aa14.58□□□□□ -0.08
LTBP4-215ENST00000596351 APBA2Q99767 749 aa14.58□□□□□ -0.08
LTBP4-215ENST00000596351 NR2E3Q9Y5X4 410 aa14.58□□□□□ -0.08
LTBP4-215ENST00000596351 GREB1LQ9C091 1923 aaPredicted RBP14.58□□□□□ -0.08
LTBP4-215ENST00000596351 ZNFX1Q9P2E3 1918 aaKnown RBP14.58□□□□□ -0.08
LTBP4-215ENST00000596351 ZNF236Q9UL36 1845 aa14.57□□□□□ -0.08
LTBP4-215ENST00000596351 CCND3P30281 292 aaPredicted RBP14.57□□□□□ -0.08
LTBP4-215ENST00000596351 RGS2P41220 211 aa14.57□□□□□ -0.08
LTBP4-215ENST00000596351 TMEM179Q6ZVK1 233 aa14.57□□□□□ -0.08
LTBP4-215ENST00000596351 NECAB2Q7Z6G3 386 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms