RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 CABP5Q9NP86 173 aa17.5■□□□□ 0.39
ZNF541-205ENST00000595558 CASQ1P31415 396 aa17.49■□□□□ 0.39
ZNF541-205ENST00000595558 STX17P56962 302 aa17.49■□□□□ 0.39
ZNF541-205ENST00000595558 EARS2Q5JPH6 523 aaKnown RBP17.49■□□□□ 0.39
ZNF541-205ENST00000595558 TEX35Q5T0J7 233 aa17.49■□□□□ 0.39
ZNF541-205ENST00000595558 SMARCE1Q969G3 411 aa17.49■□□□□ 0.39
ZNF541-205ENST00000595558 KIFC2Q96AC6 838 aa17.49■□□□□ 0.39
ZNF541-205ENST00000595558 ZSWIM4Q9H7M6 989 aa17.49■□□□□ 0.39
ZNF541-205ENST00000595558 SOWAHDA6NJG2 315 aa17.49■□□□□ 0.39
ZNF541-205ENST00000595558 EFCAB8A8MWE9 144 aa17.49■□□□□ 0.39
ZNF541-205ENST00000595558 GNPATO15228 680 aa17.49■□□□□ 0.39
ZNF541-205ENST00000595558 ACTN4O43707 911 aaKnown RBP17.49■□□□□ 0.39
ZNF541-205ENST00000595558 MAP3K9P80192 1104 aa17.49■□□□□ 0.39
ZNF541-205ENST00000595558 RTN1Q16799 776 aa17.49■□□□□ 0.39
ZNF541-205ENST00000595558 PARP10Q53GL7 1025 aa17.49■□□□□ 0.39
ZNF541-205ENST00000595558 SMYD4Q8IYR2 804 aaPredicted RBP17.49■□□□□ 0.39
ZNF541-205ENST00000595558 CPLX3Q8WVH0 158 aa17.49■□□□□ 0.39
ZNF541-205ENST00000595558 DHX58Q96C10 678 aa17.49■□□□□ 0.39
ZNF541-205ENST00000595558 WNT7AO00755 349 aa17.48■□□□□ 0.39
ZNF541-205ENST00000595558 NOM1Q5C9Z4 860 aaKnown RBP17.48■□□□□ 0.39
ZNF541-205ENST00000595558 KLHL10Q6JEL2 608 aa17.48■□□□□ 0.39
ZNF541-205ENST00000595558 EPSTI1Q96J88 318 aa17.48■□□□□ 0.39
ZNF541-205ENST00000595558 CYP2D6P10635 497 aa17.48■□□□□ 0.39
ZNF541-205ENST00000595558 CD44P16070 742 aaKnown RBP17.48■□□□□ 0.39
ZNF541-205ENST00000595558 AFMP43652 599 aa17.48■□□□□ 0.39
ZNF541-205ENST00000595558 ALX1Q15699 326 aa17.48■□□□□ 0.39
ZNF541-205ENST00000595558 NT5DC1Q5TFE4 455 aa17.48■□□□□ 0.39
ZNF541-205ENST00000595558 FCHSD1Q86WN1 690 aa17.48■□□□□ 0.39
ZNF541-205ENST00000595558 CRACR2BQ8N4Y2 399 aaPredicted RBP17.48■□□□□ 0.39
ZNF541-205ENST00000595558 ENOX1Q8TC92 643 aaKnown RBP17.48■□□□□ 0.39
ZNF541-205ENST00000595558 STK36Q9NRP7 1315 aa17.48■□□□□ 0.39
ZNF541-205ENST00000595558 STX10O60499 249 aa17.47■□□□□ 0.39
ZNF541-205ENST00000595558 TBC1D8O95759 1140 aa17.47■□□□□ 0.39
ZNF541-205ENST00000595558 PRDX5P30044 214 aa17.47■□□□□ 0.39
ZNF541-205ENST00000595558 PPP2R3AQ06190 1150 aa17.47■□□□□ 0.39
ZNF541-205ENST00000595558 PPARAQ07869 468 aa17.47■□□□□ 0.39
ZNF541-205ENST00000595558 NR1I3Q14994 352 aa17.47■□□□□ 0.39
ZNF541-205ENST00000595558 SAFBQ15424 915 aaKnown RBP eCLIP17.47■□□□□ 0.39
ZNF541-205ENST00000595558 RGS22Q8NE09 1264 aa17.47■□□□□ 0.39
ZNF541-205ENST00000595558 CCDC34Q96HJ3 373 aa17.47■□□□□ 0.39
ZNF541-205ENST00000595558 MRFAP1Q9Y605 127 aa17.47■□□□□ 0.39
ZNF541-205ENST00000595558 ANKRD36CQ5JPF3 1778 aa17.47■□□□□ 0.39
ZNF541-205ENST00000595558 TFRCP02786 760 aaKnown RBP17.47■□□□□ 0.39
ZNF541-205ENST00000595558 VEGFAP15692 232 aaPredicted RBP17.47■□□□□ 0.39
ZNF541-205ENST00000595558 LZTFL1Q9NQ48 299 aa17.47■□□□□ 0.39
ZNF541-205ENST00000595558 AATFQ9NY61 560 aaKnown RBP eCLIP17.47■□□□□ 0.39
ZNF541-205ENST00000595558 WTAPQ15007 396 aa17.46■□□□□ 0.39
ZNF541-205ENST00000595558 FAM47AQ5JRC9 791 aa17.46■□□□□ 0.39
ZNF541-205ENST00000595558 APTXQ7Z2E3 356 aaKnown RBP17.46■□□□□ 0.39
ZNF541-205ENST00000595558 MLKLQ8NB16 471 aa17.46■□□□□ 0.39
ZNF541-205ENST00000595558 SRRTQ9BXP5 876 aaKnown RBP17.46■□□□□ 0.39
ZNF541-205ENST00000595558 ARGLU1Q9NWB6 273 aaPredicted RBP17.46■□□□□ 0.39
ZNF541-205ENST00000595558 MAGEB6P1A0A0J9YX57 407 aa17.46■□□□□ 0.39
ZNF541-205ENST00000595558 RILPL1Q5EBL4 403 aa17.46■□□□□ 0.39
ZNF541-205ENST00000595558 RAD9BQ6WBX8 426 aa17.46■□□□□ 0.39
ZNF541-205ENST00000595558 STAMQ92783 540 aa17.46■□□□□ 0.39
ZNF541-205ENST00000595558 MTMR7Q9Y216 660 aa17.46■□□□□ 0.39
ZNF541-205ENST00000595558 SRPRBQ9Y5M8 271 aaKnown RBP17.46■□□□□ 0.39
ZNF541-205ENST00000595558 ADAMTS3O15072 1205 aa17.45■□□□□ 0.38
ZNF541-205ENST00000595558 CC2D1AQ6P1N0 951 aaPredicted RBP17.45■□□□□ 0.38
ZNF541-205ENST00000595558 NBPF5PQ86XG9 351 aaPredicted RBP17.45■□□□□ 0.38
ZNF541-205ENST00000595558 TRIM22Q8IYM9 498 aa17.45■□□□□ 0.38
ZNF541-205ENST00000595558 PARD6BQ9BYG5 372 aa17.45■□□□□ 0.38
ZNF541-205ENST00000595558 FOXP1Q9H334 677 aaPredicted RBP17.45■□□□□ 0.38
ZNF541-205ENST00000595558 VPS54Q9P1Q0 977 aa17.45■□□□□ 0.38
ZNF541-205ENST00000595558 CYP2C19P33261 490 aa17.45■□□□□ 0.38
ZNF541-205ENST00000595558 ST5P78524 1137 aa17.45■□□□□ 0.38
ZNF541-205ENST00000595558 RBL2Q08999 1139 aa17.45■□□□□ 0.38
ZNF541-205ENST00000595558 RSRC2Q7L4I2 434 aaKnown RBP17.45■□□□□ 0.38
ZNF541-205ENST00000595558 CDC5LQ99459 802 aaKnown RBP17.45■□□□□ 0.38
ZNF541-205ENST00000595558 RIOK1Q9BRS2 568 aaKnown RBP17.45■□□□□ 0.38
ZNF541-205ENST00000595558 THRAP3Q9Y2W1 955 aaKnown RBP17.45■□□□□ 0.38
ZNF541-205ENST00000595558 CHD4Q14839 1912 aa17.44■□□□□ 0.38
ZNF541-205ENST00000595558 USP17L12C9JPN9 530 aa17.44■□□□□ 0.38
ZNF541-205ENST00000595558 USP17L21D6R901 530 aa17.44■□□□□ 0.38
ZNF541-205ENST00000595558 MYO1BO43795 1136 aa17.44■□□□□ 0.38
ZNF541-205ENST00000595558 ABL1P00519 1130 aa17.44■□□□□ 0.38
ZNF541-205ENST00000595558 GYS2P54840 703 aa17.44■□□□□ 0.38
ZNF541-205ENST00000595558 FANCBQ8NB91 859 aa17.44■□□□□ 0.38
ZNF541-205ENST00000595558 CCDC12Q8WUD4 166 aaPredicted RBP17.44■□□□□ 0.38
ZNF541-205ENST00000595558 CDCA7Q9BWT1 371 aaPredicted RBP17.44■□□□□ 0.38
ZNF541-205ENST00000595558 HOOK1Q9UJC3 728 aaKnown RBP17.44■□□□□ 0.38
ZNF541-205ENST00000595558 PLEKHA8P1O95397 391 aa17.44■□□□□ 0.38
ZNF541-205ENST00000595558 PLCD1P51178 756 aa17.44■□□□□ 0.38
ZNF541-205ENST00000595558 GRIK5Q16478 980 aa17.44■□□□□ 0.38
ZNF541-205ENST00000595558 ZNF654Q8IZM8 581 aa17.44■□□□□ 0.38
ZNF541-205ENST00000595558 WASF1Q92558 559 aa17.44■□□□□ 0.38
ZNF541-205ENST00000595558 NACAP1Q9BZK3 213 aa17.44■□□□□ 0.38
ZNF541-205ENST00000595558 TNKSO95271 1327 aa17.43■□□□□ 0.38
ZNF541-205ENST00000595558 PLCH1Q4KWH8 1693 aa17.43■□□□□ 0.38
ZNF541-205ENST00000595558 A0A1B0GTH6 734 aa17.43■□□□□ 0.38
ZNF541-205ENST00000595558 DEXIO95424 95 aa17.43■□□□□ 0.38
ZNF541-205ENST00000595558 ELOA2Q8IYF1 753 aaPredicted RBP17.43■□□□□ 0.38
ZNF541-205ENST00000595558 SPATA20Q8TB22 786 aa17.43■□□□□ 0.38
ZNF541-205ENST00000595558 KRT23Q9C075 422 aa17.43■□□□□ 0.38
ZNF541-205ENST00000595558 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.43■□□□□ 0.38
ZNF541-205ENST00000595558 ZNF652Q9Y2D9 606 aa17.43■□□□□ 0.38
ZNF541-205ENST00000595558 MECOMQ03112 1051 aa17.43■□□□□ 0.38
ZNF541-205ENST00000595558 DPYDQ12882 1025 aa17.43■□□□□ 0.38
ZNF541-205ENST00000595558 NEK11Q8NG66 645 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms