RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 SH3D19Q5HYK7 790 aa12.01□□□□□ -0.49
BRCA1-227ENST00000591849 TREML2Q5T2D2 321 aa12.01□□□□□ -0.49
BRCA1-227ENST00000591849 C16orf86Q6ZW13 317 aa12.01□□□□□ -0.49
BRCA1-227ENST00000591849 FAM227BQ96M60 508 aa12.01□□□□□ -0.49
BRCA1-227ENST00000591849 ARHGEF10LQ9HCE6 1279 aa12.01□□□□□ -0.49
BRCA1-227ENST00000591849 RAD21O60216 631 aa12□□□□□ -0.49
BRCA1-227ENST00000591849 AKR1B1P15121 316 aa12□□□□□ -0.49
BRCA1-227ENST00000591849 PDE4AP27815 886 aa12□□□□□ -0.49
BRCA1-227ENST00000591849 HOXD10P28358 340 aa12□□□□□ -0.49
BRCA1-227ENST00000591849 PDE4BQ07343 736 aa12□□□□□ -0.49
BRCA1-227ENST00000591849 CCDC136Q96JN2 1154 aa12□□□□□ -0.49
BRCA1-227ENST00000591849 SH2D4AQ9H788 454 aa12□□□□□ -0.49
BRCA1-227ENST00000591849 RBBP6Q7Z6E9 1792 aaKnown RBP12□□□□□ -0.49
BRCA1-227ENST00000591849 A0A0D9SFI3 127 aa11.99□□□□□ -0.49
BRCA1-227ENST00000591849 ICA1Q05084 483 aa11.99□□□□□ -0.49
BRCA1-227ENST00000591849 PPARAQ07869 468 aa11.99□□□□□ -0.49
BRCA1-227ENST00000591849 TTC22Q5TAA0 569 aa11.99□□□□□ -0.49
BRCA1-227ENST00000591849 CWC27Q6UX04 472 aaKnown RBP11.99□□□□□ -0.49
BRCA1-227ENST00000591849 C17orf99Q6UX52 265 aa11.99□□□□□ -0.49
BRCA1-227ENST00000591849 CENPQQ7L2Z9 268 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-227ENST00000591849 OTOP1Q7RTM1 612 aa11.99□□□□□ -0.49
BRCA1-227ENST00000591849 CCAR1Q8IX12 1150 aaKnown RBP11.99□□□□□ -0.49
BRCA1-227ENST00000591849 ACER1Q8TDN7 264 aa11.99□□□□□ -0.49
BRCA1-227ENST00000591849 KIAA1683Q9H0B3 1180 aa11.99□□□□□ -0.49
BRCA1-227ENST00000591849 ASCC2Q9H1I8 757 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-227ENST00000591849 KANSL2Q9H9L4 492 aa11.99□□□□□ -0.49
BRCA1-227ENST00000591849 EPB41L4AQ9HCS5 686 aaPredicted RBP11.99□□□□□ -0.49
BRCA1-227ENST00000591849 TOMM22Q9NS69 142 aa11.99□□□□□ -0.49
BRCA1-227ENST00000591849 EMILIN3Q9NT22 766 aa11.99□□□□□ -0.49
BRCA1-227ENST00000591849 HTTP42858 3142 aa11.99□□□□□ -0.49
BRCA1-227ENST00000591849 CCDC171Q6TFL3 1326 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 USP17L15C9J2P7 530 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 USP17L13C9JLJ4 530 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 USP17L11C9JVI0 530 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 USP17L18D6R9N7 530 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 USP17L22D6RA61 530 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 USP17L17D6RBQ6 530 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 USP17L19D6RCP7 530 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 USP17L20D6RJB6 530 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 SMIM22K7EJ46 135 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 GUCY1A2P33402 732 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 PSMC4P43686 418 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 GCLCP48506 637 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-227ENST00000591849 FCGRTP55899 365 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 LACTBP83111 547 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-227ENST00000591849 USP17L24Q0WX57 530 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 FBXO46Q6PJ61 603 aaPredicted RBP11.98□□□□□ -0.49
BRCA1-227ENST00000591849 ANKRD13CQ8N6S4 541 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 RUFY2Q8WXA3 655 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 CWC22Q9HCG8 908 aaKnown RBP11.98□□□□□ -0.49
BRCA1-227ENST00000591849 MYH1P12882 1939 aa11.98□□□□□ -0.49
BRCA1-227ENST00000591849 PRDM1O75626 825 aa11.97□□□□□ -0.49
BRCA1-227ENST00000591849 GNRH1P01148 92 aa11.97□□□□□ -0.49
BRCA1-227ENST00000591849 TSPY3P0CV98 308 aa11.97□□□□□ -0.49
BRCA1-227ENST00000591849 TSPY8P0CW00 308 aa11.97□□□□□ -0.49
BRCA1-227ENST00000591849 RASA1P20936 1047 aa11.97□□□□□ -0.49
BRCA1-227ENST00000591849 HOXA7P31268 230 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-227ENST00000591849 CTDSPL2Q05D32 466 aa11.97□□□□□ -0.49
BRCA1-227ENST00000591849 VPS53Q5VIR6 699 aa11.97□□□□□ -0.49
BRCA1-227ENST00000591849 SAMD1Q6SPF0 538 aaPredicted RBP11.97□□□□□ -0.49
BRCA1-227ENST00000591849 P2RX7Q99572 595 aaKnown RBP11.97□□□□□ -0.49
BRCA1-227ENST00000591849 TANGO6Q9C0B7 1094 aa11.97□□□□□ -0.49
BRCA1-227ENST00000591849 PTPN22Q9Y2R2 807 aa11.97□□□□□ -0.49
BRCA1-227ENST00000591849 CENPFP49454 3210 aa11.96□□□□□ -0.49
BRCA1-227ENST00000591849 DOCK1Q14185 1865 aa11.96□□□□□ -0.49
BRCA1-227ENST00000591849 HSPD1P10809 573 aaKnown RBP11.96□□□□□ -0.49
BRCA1-227ENST00000591849 BCRP11274 1271 aa11.96□□□□□ -0.49
BRCA1-227ENST00000591849 EEF2P13639 858 aaKnown RBP11.96□□□□□ -0.49
BRCA1-227ENST00000591849 ALX1Q15699 326 aa11.96□□□□□ -0.49
BRCA1-227ENST00000591849 ZNF589Q86UQ0 364 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-227ENST00000591849 GTF3C2Q8WUA4 911 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-227ENST00000591849 C12orf42Q96LP6 360 aa11.96□□□□□ -0.49
BRCA1-227ENST00000591849 PAGR1Q9BTK6 254 aa11.96□□□□□ -0.49
BRCA1-227ENST00000591849 ARHGAP39Q9C0H5 1083 aa11.96□□□□□ -0.49
BRCA1-227ENST00000591849 RPAP3Q9H6T3 665 aaPredicted RBP11.96□□□□□ -0.49
BRCA1-227ENST00000591849 GOPCQ9HD26 462 aa11.96□□□□□ -0.49
BRCA1-227ENST00000591849 HPS5Q9UPZ3 1129 aa11.96□□□□□ -0.49
BRCA1-227ENST00000591849 TSPY2A6NKD2 308 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 TNPO2O14787 897 aaKnown RBP11.95□□□□□ -0.5
BRCA1-227ENST00000591849 RANBP6O60518 1105 aaKnown RBP11.95□□□□□ -0.5
BRCA1-227ENST00000591849 FGAP02671 866 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 VCAM1P19320 739 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 PRMT2P55345 433 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 HERVK_113P62684 666 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 TFAP4Q01664 338 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 FAM47AQ5JRC9 791 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 RRP12Q5JTH9 1297 aaKnown RBP11.95□□□□□ -0.5
BRCA1-227ENST00000591849 PPP4R3BQ5MIZ7 849 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 CATSPERGQ6ZRH7 1159 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 CLEC10AQ8IUN9 316 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 SPICE1Q8N0Z3 855 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 GPRC5AQ8NFJ5 357 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 RAET1EQ8TD07 263 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 COA7Q96BR5 231 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 CLIP2Q9UDT6 1046 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 CTNNA3Q9UI47 895 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 ISY1Q9ULR0 285 aaKnown RBP11.95□□□□□ -0.5
BRCA1-227ENST00000591849 TMX2Q9Y320 296 aa11.95□□□□□ -0.5
BRCA1-227ENST00000591849 KIAA0100Q14667 2235 aaKnown RBP11.95□□□□□ -0.5
BRCA1-227ENST00000591849 ADGRA2Q96PE1 1338 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms