RNA–Protein interactions for RNA: ENST00000591798.5

DNMT1-225, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-225ENST00000591798 PI4KBQ9UBF8 816 aa10.65□□□□□ -0.7
DNMT1-225ENST00000591798 RABGAP1Q9Y3P9 1069 aa10.65□□□□□ -0.7
DNMT1-225ENST00000591798 NDUFB9Q9Y6M9 179 aa10.65□□□□□ -0.7
DNMT1-225ENST00000591798 REV3LO60673 3130 aa10.65□□□□□ -0.7
DNMT1-225ENST00000591798 ZNFX1Q9P2E3 1918 aaKnown RBP10.64□□□□□ -0.71
DNMT1-225ENST00000591798 MUC6Q6W4X9 2439 aa10.64□□□□□ -0.71
DNMT1-225ENST00000591798 CHD7Q9P2D1 2997 aa10.64□□□□□ -0.71
DNMT1-225ENST00000591798 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.64□□□□□ -0.71
DNMT1-225ENST00000591798 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.64□□□□□ -0.71
DNMT1-225ENST00000591798 ZNF316A6NFI3 1004 aaPredicted RBP10.64□□□□□ -0.71
DNMT1-225ENST00000591798 EPHB4P54760 987 aa10.64□□□□□ -0.71
DNMT1-225ENST00000591798 GRB14Q14449 540 aa10.64□□□□□ -0.71
DNMT1-225ENST00000591798 SHROOM1Q2M3G4 852 aaPredicted RBP10.64□□□□□ -0.71
DNMT1-225ENST00000591798 WDR78Q5VTH9 848 aa10.64□□□□□ -0.71
DNMT1-225ENST00000591798 TEX11Q8IYF3 940 aa10.64□□□□□ -0.71
DNMT1-225ENST00000591798 DHX36Q9H2U1 1008 aaKnown RBP10.64□□□□□ -0.71
DNMT1-225ENST00000591798 DNAJC18Q9H819 358 aa10.64□□□□□ -0.71
DNMT1-225ENST00000591798 EMILIN3Q9NT22 766 aa10.64□□□□□ -0.71
DNMT1-225ENST00000591798 GINM1Q9NU53 330 aa10.64□□□□□ -0.71
DNMT1-225ENST00000591798 THEGQ9P2T0 379 aa10.64□□□□□ -0.71
DNMT1-225ENST00000591798 TACC3Q9Y6A5 838 aa10.64□□□□□ -0.71
DNMT1-225ENST00000591798 IVNS1ABPQ9Y6Y0 642 aa10.64□□□□□ -0.71
DNMT1-225ENST00000591798 XIRP2A4UGR9 3374 aa10.64□□□□□ -0.71
DNMT1-225ENST00000591798 GDF11O95390 407 aa10.63□□□□□ -0.71
DNMT1-225ENST00000591798 LDHCP07864 332 aa10.63□□□□□ -0.71
DNMT1-225ENST00000591798 IL15P40933 162 aaPredicted RBP10.63□□□□□ -0.71
DNMT1-225ENST00000591798 ADCYAP1R1P41586 468 aa10.63□□□□□ -0.71
DNMT1-225ENST00000591798 GSTO1P78417 241 aa10.63□□□□□ -0.71
DNMT1-225ENST00000591798 MRPS5P82675 430 aaKnown RBP10.63□□□□□ -0.71
DNMT1-225ENST00000591798 TLE2Q04725 743 aa10.63□□□□□ -0.71
DNMT1-225ENST00000591798 AKNAD1Q5T1N1 836 aa10.63□□□□□ -0.71
DNMT1-225ENST00000591798 USP17L2Q6R6M4 530 aa10.63□□□□□ -0.71
DNMT1-225ENST00000591798 METTL16Q86W50 562 aaKnown RBP10.63□□□□□ -0.71
DNMT1-225ENST00000591798 PPM1EQ8WY54 764 aa10.63□□□□□ -0.71
DNMT1-225ENST00000591798 NSUN4Q96CB9 384 aaKnown RBP10.63□□□□□ -0.71
DNMT1-225ENST00000591798 TIFAQ96CG3 184 aa10.63□□□□□ -0.71
DNMT1-225ENST00000591798 GAS2L1Q99501 681 aaPredicted RBP10.63□□□□□ -0.71
DNMT1-225ENST00000591798 MRS2Q9HD23 443 aa10.63□□□□□ -0.71
DNMT1-225ENST00000591798 ZBTB21Q9ULJ3 1066 aa10.63□□□□□ -0.71
DNMT1-225ENST00000591798 SALL2Q9Y467 1007 aaPredicted RBP10.63□□□□□ -0.71
DNMT1-225ENST00000591798 PTPRCP08575 1304 aa10.62□□□□□ -0.71
DNMT1-225ENST00000591798 SYNGAP1Q96PV0 1343 aa10.62□□□□□ -0.71
DNMT1-225ENST00000591798 SEPT4O43236 478 aa10.62□□□□□ -0.71
DNMT1-225ENST00000591798 CLTBP09497 229 aa10.62□□□□□ -0.71
DNMT1-225ENST00000591798 LRRC41Q15345 812 aa10.62□□□□□ -0.71
DNMT1-225ENST00000591798 ANO1Q5XXA6 986 aa10.62□□□□□ -0.71
DNMT1-225ENST00000591798 LBX2Q6XYB7 198 aa10.62□□□□□ -0.71
DNMT1-225ENST00000591798 FERMT2Q96AC1 680 aa10.62□□□□□ -0.71
DNMT1-225ENST00000591798 C12orf42Q96LP6 360 aa10.62□□□□□ -0.71
DNMT1-225ENST00000591798 MYH1P12882 1939 aa10.62□□□□□ -0.71
DNMT1-225ENST00000591798 GBF1Q92538 1859 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 USP17L15C9J2P7 530 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 USP17L13C9JLJ4 530 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 USP17L11C9JVI0 530 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 USP17L18D6R9N7 530 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 USP17L22D6RA61 530 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 USP17L17D6RBQ6 530 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 USP17L19D6RCP7 530 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 USP17L20D6RJB6 530 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 KIAA0355O15063 1070 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 ANP32CO43423 234 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 TIMM10P62072 90 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 FPGSQ05932 587 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 USP17L24Q0WX57 530 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 OLFML2BQ68BL8 750 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 CATSPERGQ6ZRH7 1159 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 MRPL50Q8N5N7 158 aaKnown RBP10.61□□□□□ -0.71
DNMT1-225ENST00000591798 IL27Q8NEV9 243 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 SH3RF3Q8TEJ3 882 aaPredicted RBP10.61□□□□□ -0.71
DNMT1-225ENST00000591798 C1QTNF1Q9BXJ1 281 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 BTBD7Q9P203 1132 aa10.61□□□□□ -0.71
DNMT1-225ENST00000591798 PA2G4Q9UQ80 394 aaKnown RBP10.61□□□□□ -0.71
DNMT1-225ENST00000591798 ARIH1Q9Y4X5 557 aaPredicted RBP10.61□□□□□ -0.71
DNMT1-225ENST00000591798 MYO5AQ9Y4I1 1855 aaKnown RBP10.61□□□□□ -0.71
DNMT1-225ENST00000591798 RAG1P15918 1043 aa10.6□□□□□ -0.71
DNMT1-225ENST00000591798 ADORA2AP29274 412 aa10.6□□□□□ -0.71
DNMT1-225ENST00000591798 ZYXQ15942 572 aaKnown RBP10.6□□□□□ -0.71
DNMT1-225ENST00000591798 TBC1D9Q6ZT07 1266 aa10.6□□□□□ -0.71
DNMT1-225ENST00000591798 DPP9Q86TI2 863 aa10.6□□□□□ -0.71
DNMT1-225ENST00000591798 FOXP4Q8IVH2 680 aaPredicted RBP10.6□□□□□ -0.71
DNMT1-225ENST00000591798 CRACR2BQ8N4Y2 399 aaPredicted RBP10.6□□□□□ -0.71
DNMT1-225ENST00000591798 XAGE2Q96GT9 111 aa10.6□□□□□ -0.71
DNMT1-225ENST00000591798 TRIM34Q9BYJ4 488 aa10.6□□□□□ -0.71
DNMT1-225ENST00000591798 PRDM12Q9H4Q4 367 aa10.6□□□□□ -0.71
DNMT1-225ENST00000591798 RAI14Q9P0K7 980 aa10.6□□□□□ -0.71
DNMT1-225ENST00000591798 HMG20BQ9P0W2 317 aa10.6□□□□□ -0.71
DNMT1-225ENST00000591798 PHF24Q9UPV7 400 aa10.6□□□□□ -0.71
DNMT1-225ENST00000591798 TRANK1O15050 2925 aa10.6□□□□□ -0.71
DNMT1-225ENST00000591798 FLT1P17948 1338 aa10.59□□□□□ -0.71
DNMT1-225ENST00000591798 A0A0G2JMZ2 1700 aa10.59□□□□□ -0.71
DNMT1-225ENST00000591798 A0A1B0GUL7 405 aa10.59□□□□□ -0.71
DNMT1-225ENST00000591798 SPDYE16A6NNV3 312 aaPredicted RBP10.59□□□□□ -0.71
DNMT1-225ENST00000591798 GH2P01242 217 aa10.59□□□□□ -0.71
DNMT1-225ENST00000591798 MVPQ14764 893 aaKnown RBP10.59□□□□□ -0.71
DNMT1-225ENST00000591798 CCDC85BQ15834 202 aaPredicted RBP10.59□□□□□ -0.71
DNMT1-225ENST00000591798 FAM47AQ5JRC9 791 aa10.59□□□□□ -0.71
DNMT1-225ENST00000591798 PI16Q6UXB8 463 aa10.59□□□□□ -0.71
DNMT1-225ENST00000591798 TGFBRAP1Q8WUH2 860 aa10.59□□□□□ -0.71
DNMT1-225ENST00000591798 PBX4Q9BYU1 374 aa10.59□□□□□ -0.71
DNMT1-225ENST00000591798 COPRSQ9NQ92 184 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms