RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 KIAA1683Q9H0B3 1180 aa19.63■□□□□ 0.73
CIRBP-233ENST00000591622 ASCC2Q9H1I8 757 aaPredicted RBP19.63■□□□□ 0.73
CIRBP-233ENST00000591622 EMILIN3Q9NT22 766 aa19.63■□□□□ 0.73
CIRBP-233ENST00000591622 MINDY4BA8MYZ0 360 aa19.62■□□□□ 0.73
CIRBP-233ENST00000591622 GNRH1P01148 92 aa19.62■□□□□ 0.73
CIRBP-233ENST00000591622 USP14P54578 494 aa19.62■□□□□ 0.73
CIRBP-233ENST00000591622 ACER1Q8TDN7 264 aa19.62■□□□□ 0.73
CIRBP-233ENST00000591622 RILPL2Q969X0 211 aa19.62■□□□□ 0.73
CIRBP-233ENST00000591622 C12orf42Q96LP6 360 aa19.62■□□□□ 0.73
CIRBP-233ENST00000591622 HELLSQ9NRZ9 838 aa19.62■□□□□ 0.73
CIRBP-233ENST00000591622 AKR1B1P15121 316 aa19.61■□□□□ 0.73
CIRBP-233ENST00000591622 PSMC4P43686 418 aa19.61■□□□□ 0.73
CIRBP-233ENST00000591622 ZYXQ15942 572 aaKnown RBP19.61■□□□□ 0.73
CIRBP-233ENST00000591622 ROBO3Q96MS0 1386 aa19.6■□□□□ 0.73
CIRBP-233ENST00000591622 CTGFP29279 349 aa19.6■□□□□ 0.73
CIRBP-233ENST00000591622 GCLCP48506 637 aaPredicted RBP19.6■□□□□ 0.73
CIRBP-233ENST00000591622 IRX3P78415 501 aaPredicted RBP19.6■□□□□ 0.73
CIRBP-233ENST00000591622 CCDC129Q6ZRS4 1044 aa19.6■□□□□ 0.73
CIRBP-233ENST00000591622 ANKRD13CQ8N6S4 541 aa19.6■□□□□ 0.73
CIRBP-233ENST00000591622 TRIM47Q96LD4 638 aa19.6■□□□□ 0.73
CIRBP-233ENST00000591622 FAM227BQ96M60 508 aa19.6■□□□□ 0.73
CIRBP-233ENST00000591622 BAZ2AQ9UIF9 1905 aaKnown RBP19.6■□□□□ 0.73
CIRBP-233ENST00000591622 A0A1W2PRG0 241 aa19.59■□□□□ 0.73
CIRBP-233ENST00000591622 ECM2O94769 699 aaPredicted RBP19.59■□□□□ 0.73
CIRBP-233ENST00000591622 FMNL1O95466 1100 aaPredicted RBP19.59■□□□□ 0.73
CIRBP-233ENST00000591622 PDE4AP27815 886 aa19.59■□□□□ 0.73
CIRBP-233ENST00000591622 NAPBQ9H115 298 aa19.59■□□□□ 0.73
CIRBP-233ENST00000591622 A0A0D9SFI3 127 aa19.58■□□□□ 0.72
CIRBP-233ENST00000591622 FOXP2O15409 715 aa19.58■□□□□ 0.72
CIRBP-233ENST00000591622 PRMT2P55345 433 aa19.58■□□□□ 0.72
CIRBP-233ENST00000591622 FCGRTP55899 365 aa19.58■□□□□ 0.72
CIRBP-233ENST00000591622 FAM110CQ1W6H9 321 aa19.58■□□□□ 0.72
CIRBP-233ENST00000591622 MCMDC2Q4G0Z9 681 aa19.58■□□□□ 0.72
CIRBP-233ENST00000591622 SIAH1Q8IUQ4 282 aa19.58■□□□□ 0.72
CIRBP-233ENST00000591622 STK11IPQ8N1F8 1099 aa19.58■□□□□ 0.72
CIRBP-233ENST00000591622 P2RX7Q99572 595 aaKnown RBP19.58■□□□□ 0.72
CIRBP-233ENST00000591622 MKNK2Q9HBH9 465 aa19.58■□□□□ 0.72
CIRBP-233ENST00000591622 USP17L15C9J2P7 530 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 USP17L13C9JLJ4 530 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 USP17L11C9JVI0 530 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 USP17L18D6R9N7 530 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 USP17L22D6RA61 530 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 USP17L17D6RBQ6 530 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 USP17L19D6RCP7 530 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 USP17L20D6RJB6 530 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 VCAM1P19320 739 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 SDSP20132 328 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 RASA1P20936 1047 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 HOXD10P28358 340 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 HERVK_113P62684 666 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 ICA1Q05084 483 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 USP17L24Q0WX57 530 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 NMIQ13287 307 aaPredicted RBP19.57■□□□□ 0.72
CIRBP-233ENST00000591622 VPS53Q5VIR6 699 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 CLEC10AQ8IUN9 316 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 KANSL2Q9H9L4 492 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 ZNF287Q9HBT7 754 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 ARHGEF10LQ9HCE6 1279 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 SRRDQ9UH36 339 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 PTCH2Q9Y6C5 1203 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 HTTP42858 3142 aa19.57■□□□□ 0.72
CIRBP-233ENST00000591622 SH2D4AQ9H788 454 aa19.56■□□□□ 0.72
CIRBP-233ENST00000591622 MORF4L1Q9UBU8 362 aa19.56■□□□□ 0.72
CIRBP-233ENST00000591622 TMX2Q9Y320 296 aa19.56■□□□□ 0.72
CIRBP-233ENST00000591622 SLC3A2P08195 630 aaKnown RBP19.55■□□□□ 0.72
CIRBP-233ENST00000591622 PPARAQ07869 468 aa19.55■□□□□ 0.72
CIRBP-233ENST00000591622 CATSPERGQ6ZRH7 1159 aa19.55■□□□□ 0.72
CIRBP-233ENST00000591622 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.55■□□□□ 0.72
CIRBP-233ENST00000591622 ZSWIM8A7E2V4 1837 aa19.54■□□□□ 0.72
CIRBP-233ENST00000591622 PRDM1O75626 825 aa19.54■□□□□ 0.72
CIRBP-233ENST00000591622 EEF2P13639 858 aaKnown RBP19.54■□□□□ 0.72
CIRBP-233ENST00000591622 PDE4BQ07343 736 aa19.54■□□□□ 0.72
CIRBP-233ENST00000591622 ALX1Q15699 326 aa19.54■□□□□ 0.72
CIRBP-233ENST00000591622 ZNF444Q8N0Y2 327 aaPredicted RBP19.54■□□□□ 0.72
CIRBP-233ENST00000591622 GTF3C2Q8WUA4 911 aaPredicted RBP19.54■□□□□ 0.72
CIRBP-233ENST00000591622 ARMC5Q96C12 935 aa19.54■□□□□ 0.72
CIRBP-233ENST00000591622 RPAP3Q9H6T3 665 aaPredicted RBP19.54■□□□□ 0.72
CIRBP-233ENST00000591622 RBPJLQ9UBG7 517 aa19.54■□□□□ 0.72
CIRBP-233ENST00000591622 CCDC171Q6TFL3 1326 aa19.53■□□□□ 0.72
CIRBP-233ENST00000591622 MYPNQ86TC9 1320 aa19.53■□□□□ 0.72
CIRBP-233ENST00000591622 HIP1O00291 1037 aa19.53■□□□□ 0.72
CIRBP-233ENST00000591622 TNPO2O14787 897 aaKnown RBP19.53■□□□□ 0.72
CIRBP-233ENST00000591622 ATP2B2Q01814 1243 aa19.53■□□□□ 0.72
CIRBP-233ENST00000591622 PRKCZQ05513 592 aa19.53■□□□□ 0.72
CIRBP-233ENST00000591622 SLC9C1Q4G0N8 1177 aa19.53■□□□□ 0.72
CIRBP-233ENST00000591622 TTC22Q5TAA0 569 aa19.53■□□□□ 0.72
CIRBP-233ENST00000591622 ZNF589Q86UQ0 364 aaPredicted RBP19.53■□□□□ 0.72
CIRBP-233ENST00000591622 GPRC5AQ8NFJ5 357 aa19.53■□□□□ 0.72
CIRBP-233ENST00000591622 LPAR1Q92633 364 aa19.53■□□□□ 0.72
CIRBP-233ENST00000591622 VCPKMTQ9H867 229 aa19.53■□□□□ 0.72
CIRBP-233ENST00000591622 TXNRD2Q9NNW7 524 aa19.53■□□□□ 0.72
CIRBP-233ENST00000591622 DIAPH3Q9NSV4 1193 aa19.53■□□□□ 0.72
CIRBP-233ENST00000591622 HSPD1P10809 573 aaKnown RBP19.52■□□□□ 0.72
CIRBP-233ENST00000591622 MFAP1P55081 439 aaKnown RBP19.52■□□□□ 0.72
CIRBP-233ENST00000591622 SOX10P56693 466 aa19.52■□□□□ 0.72
CIRBP-233ENST00000591622 KIAA1755Q5JYT7 1200 aa19.52■□□□□ 0.72
CIRBP-233ENST00000591622 POTEEQ6S8J3 1075 aa19.52■□□□□ 0.72
CIRBP-233ENST00000591622 NBPF11Q86T75 865 aa19.52■□□□□ 0.72
CIRBP-233ENST00000591622 ANAPC4Q9UJX5 808 aa19.52■□□□□ 0.72
CIRBP-233ENST00000591622 PEX10O60683 326 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms