RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 KIF22Q14807 665 aa10.99□□□□□ -0.65
DNMT1-223ENST00000591239 ARHGEF6Q15052 776 aa10.99□□□□□ -0.65
DNMT1-223ENST00000591239 CCDC129Q6ZRS4 1044 aa10.99□□□□□ -0.65
DNMT1-223ENST00000591239 TMEM179Q6ZVK1 233 aa10.99□□□□□ -0.65
DNMT1-223ENST00000591239 ACER1Q8TDN7 264 aa10.99□□□□□ -0.65
DNMT1-223ENST00000591239 SMCR8Q8TEV9 937 aaPredicted RBP10.99□□□□□ -0.65
DNMT1-223ENST00000591239 CCDC17Q96LX7 622 aa10.99□□□□□ -0.65
DNMT1-223ENST00000591239 FAM227BQ96M60 508 aa10.99□□□□□ -0.65
DNMT1-223ENST00000591239 FEZ1Q99689 392 aa10.99□□□□□ -0.65
DNMT1-223ENST00000591239 KIAA1683Q9H0B3 1180 aa10.99□□□□□ -0.65
DNMT1-223ENST00000591239 EFCC1Q9HA90 598 aa10.99□□□□□ -0.65
DNMT1-223ENST00000591239 HELLSQ9NRZ9 838 aa10.99□□□□□ -0.65
DNMT1-223ENST00000591239 EMILIN3Q9NT22 766 aa10.99□□□□□ -0.65
DNMT1-223ENST00000591239 PNMA3Q9UL41 463 aa10.99□□□□□ -0.65
DNMT1-223ENST00000591239 LOC285556D6RIA3 1793 aa10.98□□□□□ -0.65
DNMT1-223ENST00000591239 A0A0D9SFI3 127 aa10.98□□□□□ -0.65
DNMT1-223ENST00000591239 BCRP11274 1271 aa10.98□□□□□ -0.65
DNMT1-223ENST00000591239 AKR1B1P15121 316 aa10.98□□□□□ -0.65
DNMT1-223ENST00000591239 OSBPP22059 807 aa10.98□□□□□ -0.65
DNMT1-223ENST00000591239 HOXA7P31268 230 aaPredicted RBP10.98□□□□□ -0.65
DNMT1-223ENST00000591239 ZYXQ15942 572 aaKnown RBP10.98□□□□□ -0.65
DNMT1-223ENST00000591239 MCMDC2Q4G0Z9 681 aa10.98□□□□□ -0.65
DNMT1-223ENST00000591239 FBXO46Q6PJ61 603 aaPredicted RBP10.98□□□□□ -0.65
DNMT1-223ENST00000591239 USP17L2Q6R6M4 530 aa10.98□□□□□ -0.65
DNMT1-223ENST00000591239 STK11IPQ8N1F8 1099 aa10.98□□□□□ -0.65
DNMT1-223ENST00000591239 ARHGAP39Q9C0H5 1083 aa10.98□□□□□ -0.65
DNMT1-223ENST00000591239 NAPBQ9H115 298 aa10.98□□□□□ -0.65
DNMT1-223ENST00000591239 ASCC2Q9H1I8 757 aaPredicted RBP10.98□□□□□ -0.65
DNMT1-223ENST00000591239 BRCA2P51587 3418 aa10.97□□□□□ -0.65
DNMT1-223ENST00000591239 CCDC85CA6NKD9 419 aa10.97□□□□□ -0.65
DNMT1-223ENST00000591239 FOXP2O15409 715 aa10.97□□□□□ -0.65
DNMT1-223ENST00000591239 SDSP20132 328 aa10.97□□□□□ -0.65
DNMT1-223ENST00000591239 USP14P54578 494 aa10.97□□□□□ -0.65
DNMT1-223ENST00000591239 IRX3P78415 501 aaPredicted RBP10.97□□□□□ -0.65
DNMT1-223ENST00000591239 NMIQ13287 307 aaPredicted RBP10.97□□□□□ -0.65
DNMT1-223ENST00000591239 VPS53Q5VIR6 699 aa10.97□□□□□ -0.65
DNMT1-223ENST00000591239 C12orf42Q96LP6 360 aa10.97□□□□□ -0.65
DNMT1-223ENST00000591239 MKNK2Q9HBH9 465 aa10.97□□□□□ -0.65
DNMT1-223ENST00000591239 HPS5Q9UPZ3 1129 aa10.97□□□□□ -0.65
DNMT1-223ENST00000591239 PTPN22Q9Y2R2 807 aa10.97□□□□□ -0.65
DNMT1-223ENST00000591239 ROBO3Q96MS0 1386 aa10.97□□□□□ -0.65
DNMT1-223ENST00000591239 MYH8P13535 1937 aa10.96□□□□□ -0.65
DNMT1-223ENST00000591239 A0A1W2PRG0 241 aa10.96□□□□□ -0.65
DNMT1-223ENST00000591239 ECM2O94769 699 aaPredicted RBP10.96□□□□□ -0.65
DNMT1-223ENST00000591239 GNRH1P01148 92 aa10.96□□□□□ -0.65
DNMT1-223ENST00000591239 RASA1P20936 1047 aa10.96□□□□□ -0.65
DNMT1-223ENST00000591239 CTGFP29279 349 aa10.96□□□□□ -0.65
DNMT1-223ENST00000591239 PSMC4P43686 418 aa10.96□□□□□ -0.65
DNMT1-223ENST00000591239 GCLCP48506 637 aaPredicted RBP10.96□□□□□ -0.65
DNMT1-223ENST00000591239 ICA1Q05084 483 aa10.96□□□□□ -0.65
DNMT1-223ENST00000591239 ZNF589Q86UQ0 364 aaPredicted RBP10.96□□□□□ -0.65
DNMT1-223ENST00000591239 CLEC10AQ8IUN9 316 aa10.96□□□□□ -0.65
DNMT1-223ENST00000591239 SIAH1Q8IUQ4 282 aa10.96□□□□□ -0.65
DNMT1-223ENST00000591239 ANKRD13CQ8N6S4 541 aa10.96□□□□□ -0.65
DNMT1-223ENST00000591239 TRIM47Q96LD4 638 aa10.96□□□□□ -0.65
DNMT1-223ENST00000591239 P2RX7Q99572 595 aaKnown RBP10.96□□□□□ -0.65
DNMT1-223ENST00000591239 KANSL2Q9H9L4 492 aa10.96□□□□□ -0.65
DNMT1-223ENST00000591239 ZNF287Q9HBT7 754 aa10.96□□□□□ -0.65
DNMT1-223ENST00000591239 USP17L15C9J2P7 530 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 USP17L13C9JLJ4 530 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 USP17L11C9JVI0 530 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 USP17L18D6R9N7 530 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 USP17L22D6RA61 530 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 USP17L17D6RBQ6 530 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 USP17L19D6RCP7 530 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 USP17L20D6RJB6 530 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 HIP1O00291 1037 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 FMNL1O95466 1100 aaPredicted RBP10.95□□□□□ -0.66
DNMT1-223ENST00000591239 SLC3A2P08195 630 aaKnown RBP10.95□□□□□ -0.66
DNMT1-223ENST00000591239 HSPD1P10809 573 aaKnown RBP10.95□□□□□ -0.66
DNMT1-223ENST00000591239 GSPT1P15170 499 aaKnown RBP10.95□□□□□ -0.66
DNMT1-223ENST00000591239 VCAM1P19320 739 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 HERVK_113P62684 666 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 PDE4BQ07343 736 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 PPARAQ07869 468 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 USP17L24Q0WX57 530 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 ALX1Q15699 326 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 FAM110CQ1W6H9 321 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 TTC22Q5TAA0 569 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 ZNF444Q8N0Y2 327 aaPredicted RBP10.95□□□□□ -0.66
DNMT1-223ENST00000591239 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.95□□□□□ -0.66
DNMT1-223ENST00000591239 ARHGEF10LQ9HCE6 1279 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 DIAPH3Q9NSV4 1193 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 TMX2Q9Y320 296 aa10.95□□□□□ -0.66
DNMT1-223ENST00000591239 CCDC171Q6TFL3 1326 aa10.94□□□□□ -0.66
DNMT1-223ENST00000591239 ZSWIM8A7E2V4 1837 aa10.94□□□□□ -0.66
DNMT1-223ENST00000591239 PRDM1O75626 825 aa10.94□□□□□ -0.66
DNMT1-223ENST00000591239 FGAP02671 866 aa10.94□□□□□ -0.66
DNMT1-223ENST00000591239 EEF2P13639 858 aaKnown RBP10.94□□□□□ -0.66
DNMT1-223ENST00000591239 HOXD10P28358 340 aa10.94□□□□□ -0.66
DNMT1-223ENST00000591239 MFAP1P55081 439 aaKnown RBP10.94□□□□□ -0.66
DNMT1-223ENST00000591239 FCGRTP55899 365 aa10.94□□□□□ -0.66
DNMT1-223ENST00000591239 ATP2B2Q01814 1243 aa10.94□□□□□ -0.66
DNMT1-223ENST00000591239 CWC27Q6UX04 472 aaKnown RBP10.94□□□□□ -0.66
DNMT1-223ENST00000591239 CATSPERGQ6ZRH7 1159 aa10.94□□□□□ -0.66
DNMT1-223ENST00000591239 RPAP3Q9H6T3 665 aaPredicted RBP10.94□□□□□ -0.66
DNMT1-223ENST00000591239 SH2D4AQ9H788 454 aa10.94□□□□□ -0.66
DNMT1-223ENST00000591239 SRRDQ9UH36 339 aa10.94□□□□□ -0.66
DNMT1-223ENST00000591239 PTCH2Q9Y6C5 1203 aa10.94□□□□□ -0.66
DNMT1-223ENST00000591239 MKI67P46013 3256 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms