RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 COA1Q9GZY4 146 aa13.05□□□□□ -0.32
TPM4-213ENST00000591226 DDX60LQ5H9U9 1706 aaKnown RBP13.05□□□□□ -0.32
TPM4-213ENST00000591226 GAKO14976 1311 aa13.05□□□□□ -0.32
TPM4-213ENST00000591226 ADCY5O95622 1261 aa13.05□□□□□ -0.32
TPM4-213ENST00000591226 RHBDL3P58872 404 aa13.05□□□□□ -0.32
TPM4-213ENST00000591226 NR5A1Q13285 461 aa13.05□□□□□ -0.32
TPM4-213ENST00000591226 DPP8Q6V1X1 898 aaPredicted RBP13.05□□□□□ -0.32
TPM4-213ENST00000591226 LUZP1Q86V48 1076 aa13.05□□□□□ -0.32
TPM4-213ENST00000591226 CERS3Q8IU89 383 aa13.05□□□□□ -0.32
TPM4-213ENST00000591226 OXER1Q8TDS5 423 aa13.05□□□□□ -0.32
TPM4-213ENST00000591226 FOXP1Q9H334 677 aaPredicted RBP13.05□□□□□ -0.32
TPM4-213ENST00000591226 MKNK2Q9HBH9 465 aa13.05□□□□□ -0.32
TPM4-213ENST00000591226 IL17RBQ9NRM6 502 aa13.05□□□□□ -0.32
TPM4-213ENST00000591226 VPS54Q9P1Q0 977 aa13.05□□□□□ -0.32
TPM4-213ENST00000591226 V9GY48 417 aaPredicted RBP13.05□□□□□ -0.32
TPM4-213ENST00000591226 CNTNAP5Q8WYK1 1306 aa13.04□□□□□ -0.32
TPM4-213ENST00000591226 AP5Z1O43299 807 aa13.04□□□□□ -0.32
TPM4-213ENST00000591226 PRPF3O43395 683 aaKnown RBP13.04□□□□□ -0.32
TPM4-213ENST00000591226 ALDH1B1P30837 517 aa13.04□□□□□ -0.32
TPM4-213ENST00000591226 CTCFLQ8NI51 663 aaPredicted RBP13.04□□□□□ -0.32
TPM4-213ENST00000591226 FAM163AQ96GL9 167 aaPredicted RBP13.04□□□□□ -0.32
TPM4-213ENST00000591226 MASTLQ96GX5 879 aa13.04□□□□□ -0.32
TPM4-213ENST00000591226 ZC3H12CQ9C0D7 883 aaKnown RBP13.04□□□□□ -0.32
TPM4-213ENST00000591226 DNAJC25Q9H1X3 360 aa13.04□□□□□ -0.32
TPM4-213ENST00000591226 CBX8Q9HC52 389 aa13.04□□□□□ -0.32
TPM4-213ENST00000591226 FLT1P17948 1338 aa13.04□□□□□ -0.32
TPM4-213ENST00000591226 BAZ2BQ9UIF8 2168 aaKnown RBP13.04□□□□□ -0.32
TPM4-213ENST00000591226 TOB1P50616 345 aaPredicted RBP13.04□□□□□ -0.32
TPM4-213ENST00000591226 DOK7Q18PE1 504 aa13.04□□□□□ -0.32
TPM4-213ENST00000591226 HS1BP3Q53T59 392 aa13.04□□□□□ -0.32
TPM4-213ENST00000591226 SLF2Q8IX21 1173 aa13.04□□□□□ -0.32
TPM4-213ENST00000591226 SRBD1Q8N5C6 995 aaKnown RBP13.04□□□□□ -0.32
TPM4-213ENST00000591226 USP17L3A6NCW0 530 aa13.03□□□□□ -0.32
TPM4-213ENST00000591226 USP17L4A6NCW7 530 aa13.03□□□□□ -0.32
TPM4-213ENST00000591226 PPP6R2O75170 966 aa13.03□□□□□ -0.32
TPM4-213ENST00000591226 PFKFB1P16118 471 aa13.03□□□□□ -0.32
TPM4-213ENST00000591226 PLCG2P16885 1265 aa13.03□□□□□ -0.32
TPM4-213ENST00000591226 CMA1P23946 247 aa13.03□□□□□ -0.32
TPM4-213ENST00000591226 USP17L1Q7RTZ2 530 aa13.03□□□□□ -0.32
TPM4-213ENST00000591226 ZSCAN30Q86W11 494 aa13.03□□□□□ -0.32
TPM4-213ENST00000591226 ERCC4Q92889 916 aaPredicted RBP13.03□□□□□ -0.32
TPM4-213ENST00000591226 ZNF622Q969S3 477 aaKnown RBP eCLIP13.03□□□□□ -0.32
TPM4-213ENST00000591226 KAT14Q9H8E8 782 aa13.03□□□□□ -0.32
TPM4-213ENST00000591226 DAGLAQ9Y4D2 1042 aa13.03□□□□□ -0.32
TPM4-213ENST00000591226 RGPD3A6NKT7 1758 aaPredicted RBP13.03□□□□□ -0.32
TPM4-213ENST00000591226 RGPD4Q7Z3J3 1758 aa13.03□□□□□ -0.32
TPM4-213ENST00000591226 F8W031 263 aaPredicted RBP13.03□□□□□ -0.32
TPM4-213ENST00000591226 CERS5Q8N5B7 392 aa13.03□□□□□ -0.32
TPM4-213ENST00000591226 JMYQ8N9B5 988 aa13.03□□□□□ -0.32
TPM4-213ENST00000591226 MXD3Q9BW11 206 aa13.03□□□□□ -0.32
TPM4-213ENST00000591226 A0A087WWV3 80 aa13.02□□□□□ -0.32
TPM4-213ENST00000591226 TSPY3P0CV98 308 aa13.02□□□□□ -0.32
TPM4-213ENST00000591226 TSPY8P0CW00 308 aa13.02□□□□□ -0.32
TPM4-213ENST00000591226 RASA1P20936 1047 aa13.02□□□□□ -0.32
TPM4-213ENST00000591226 C2CD5Q86YS7 1000 aa13.02□□□□□ -0.32
TPM4-213ENST00000591226 CLIC6Q96NY7 704 aa13.02□□□□□ -0.32
TPM4-213ENST00000591226 SDF4Q9BRK5 362 aa13.02□□□□□ -0.32
TPM4-213ENST00000591226 CCDC39Q9UFE4 941 aa13.02□□□□□ -0.32
TPM4-213ENST00000591226 MYH1P12882 1939 aa13.02□□□□□ -0.33
TPM4-213ENST00000591226 XBP1P17861 261 aa13.02□□□□□ -0.33
TPM4-213ENST00000591226 NT5C2P49902 561 aa13.02□□□□□ -0.33
TPM4-213ENST00000591226 ZNF165P49910 485 aa13.02□□□□□ -0.33
TPM4-213ENST00000591226 SHC4Q6S5L8 630 aa13.02□□□□□ -0.33
TPM4-213ENST00000591226 DGKHQ86XP1 1220 aa13.02□□□□□ -0.33
TPM4-213ENST00000591226 ZNF444Q8N0Y2 327 aaPredicted RBP13.02□□□□□ -0.33
TPM4-213ENST00000591226 PNMA1Q8ND90 353 aa13.02□□□□□ -0.33
TPM4-213ENST00000591226 PIBF1Q8WXW3 757 aa13.02□□□□□ -0.33
TPM4-213ENST00000591226 PHF20Q9BVI0 1012 aa13.02□□□□□ -0.33
TPM4-213ENST00000591226 SNED1Q8TER0 1413 aa13.02□□□□□ -0.33
TPM4-213ENST00000591226 ZNF202O95125 648 aa13.01□□□□□ -0.33
TPM4-213ENST00000591226 PTMAP06454 111 aaKnown RBP13.01□□□□□ -0.33
TPM4-213ENST00000591226 STX1AQ16623 288 aa13.01□□□□□ -0.33
TPM4-213ENST00000591226 C11orf57Q6ZUT1 292 aaPredicted RBP13.01□□□□□ -0.33
TPM4-213ENST00000591226 ANKS1AQ92625 1134 aa13.01□□□□□ -0.33
TPM4-213ENST00000591226 TMX4Q9H1E5 349 aaPredicted RBP13.01□□□□□ -0.33
TPM4-213ENST00000591226 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.01□□□□□ -0.33
TPM4-213ENST00000591226 RGS17Q9UGC6 210 aaPredicted RBP13.01□□□□□ -0.33
TPM4-213ENST00000591226 ZHX1Q9UKY1 873 aaPredicted RBP13.01□□□□□ -0.33
TPM4-213ENST00000591226 FOCADQ5VW36 1801 aa13.01□□□□□ -0.33
TPM4-213ENST00000591226 FAM205CA6NFA0 338 aa13.01□□□□□ -0.33
TPM4-213ENST00000591226 CDK8P49336 464 aa13.01□□□□□ -0.33
TPM4-213ENST00000591226 RILPL1Q5EBL4 403 aa13.01□□□□□ -0.33
TPM4-213ENST00000591226 C16orf86Q6ZW13 317 aa13.01□□□□□ -0.33
TPM4-213ENST00000591226 DHX37Q8IY37 1157 aaKnown RBP13.01□□□□□ -0.33
TPM4-213ENST00000591226 CABP5Q9NP86 173 aa13.01□□□□□ -0.33
TPM4-213ENST00000591226 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.01□□□□□ -0.33
TPM4-213ENST00000591226 PCDHB6Q9Y5E3 794 aa13.01□□□□□ -0.33
TPM4-213ENST00000591226 QSER1Q2KHR3 1735 aa13.01□□□□□ -0.33
TPM4-213ENST00000591226 ADAMTSL1Q8N6G6 1762 aa13□□□□□ -0.33
TPM4-213ENST00000591226 KIF5BP33176 963 aa13□□□□□ -0.33
TPM4-213ENST00000591226 KRT2P35908 639 aa13□□□□□ -0.33
TPM4-213ENST00000591226 EZH2Q15910 746 aaKnown RBP13□□□□□ -0.33
TPM4-213ENST00000591226 TCP11L1Q9NUJ3 509 aa13□□□□□ -0.33
TPM4-213ENST00000591226 NOL7Q9UMY1 257 aaKnown RBP13□□□□□ -0.33
TPM4-213ENST00000591226 TTF2Q9UNY4 1162 aaKnown RBP13□□□□□ -0.33
TPM4-213ENST00000591226 SUGT1Q9Y2Z0 365 aa13□□□□□ -0.33
TPM4-213ENST00000591226 CUTAO60888 179 aa13□□□□□ -0.33
TPM4-213ENST00000591226 ATP2B1P20020 1258 aa13□□□□□ -0.33
TPM4-213ENST00000591226 EARS2Q5JPH6 523 aaKnown RBP13□□□□□ -0.33
TPM4-213ENST00000591226 RESP18Q5W5W9 173 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms