RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 PEX10O60683 326 aa21.84■■□□□ 1.09
DDX39A-212ENST00000590260 GNAT2P19087 354 aa21.84■■□□□ 1.09
DDX39A-212ENST00000590260 HOXA7P31268 230 aaPredicted RBP21.84■■□□□ 1.09
DDX39A-212ENST00000590260 LRRFIP1Q32MZ4 808 aaKnown RBP21.84■■□□□ 1.09
DDX39A-212ENST00000590260 KIAA1755Q5JYT7 1200 aa21.84■■□□□ 1.09
DDX39A-212ENST00000590260 TRIM47Q96LD4 638 aa21.84■■□□□ 1.09
DDX39A-212ENST00000590260 TAOK2Q9UL54 1235 aa21.84■■□□□ 1.09
DDX39A-212ENST00000590260 NMIQ13287 307 aaPredicted RBP21.83■■□□□ 1.09
DDX39A-212ENST00000590260 ZYXQ15942 572 aaKnown RBP21.83■■□□□ 1.09
DDX39A-212ENST00000590260 ZNF589Q86UQ0 364 aaPredicted RBP21.83■■□□□ 1.09
DDX39A-212ENST00000590260 STK11IPQ8N1F8 1099 aa21.83■■□□□ 1.09
DDX39A-212ENST00000590260 KIAA1683Q9H0B3 1180 aa21.83■■□□□ 1.09
DDX39A-212ENST00000590260 CABP5Q9NP86 173 aa21.83■■□□□ 1.09
DDX39A-212ENST00000590260 TACC3Q9Y6A5 838 aa21.83■■□□□ 1.09
DDX39A-212ENST00000590260 CCDC85CA6NKD9 419 aa21.82■■□□□ 1.08
DDX39A-212ENST00000590260 MINDY4BA8MYZ0 360 aa21.82■■□□□ 1.08
DDX39A-212ENST00000590260 TRIM6-TRIM34B2RNG4 842 aa21.82■■□□□ 1.08
DDX39A-212ENST00000590260 MPHOSPH10O00566 681 aaKnown RBP21.82■■□□□ 1.08
DDX39A-212ENST00000590260 GSPT1P15170 499 aaKnown RBP21.82■■□□□ 1.08
DDX39A-212ENST00000590260 RASA1P20936 1047 aa21.82■■□□□ 1.08
DDX39A-212ENST00000590260 USP17L2Q6R6M4 530 aa21.82■■□□□ 1.08
DDX39A-212ENST00000590260 TMEM179Q6ZVK1 233 aa21.82■■□□□ 1.08
DDX39A-212ENST00000590260 RILPL2Q969X0 211 aa21.82■■□□□ 1.08
DDX39A-212ENST00000590260 DDRGK1Q96HY6 314 aa21.82■■□□□ 1.08
DDX39A-212ENST00000590260 P2RX7Q99572 595 aaKnown RBP21.82■■□□□ 1.08
DDX39A-212ENST00000590260 HELLSQ9NRZ9 838 aa21.82■■□□□ 1.08
DDX39A-212ENST00000590260 RLFQ13129 1914 aa21.81■■□□□ 1.08
DDX39A-212ENST00000590260 TMOD4Q9NZQ9 345 aa21.81■■□□□ 1.08
DDX39A-212ENST00000590260 APPP05067 770 aa21.8■■□□□ 1.08
DDX39A-212ENST00000590260 SDSP20132 328 aa21.8■■□□□ 1.08
DDX39A-212ENST00000590260 TDO2P48775 406 aa21.8■■□□□ 1.08
DDX39A-212ENST00000590260 ANKRD13CQ8N6S4 541 aa21.8■■□□□ 1.08
DDX39A-212ENST00000590260 PTCH2Q9Y6C5 1203 aa21.8■■□□□ 1.08
DDX39A-212ENST00000590260 VCAM1P19320 739 aa21.79■■□□□ 1.08
DDX39A-212ENST00000590260 OSBPP22059 807 aa21.79■■□□□ 1.08
DDX39A-212ENST00000590260 PSMC4P43686 418 aa21.79■■□□□ 1.08
DDX39A-212ENST00000590260 TICAM2Q86XR7 235 aa21.79■■□□□ 1.08
DDX39A-212ENST00000590260 AMOTL1Q8IY63 956 aa21.79■■□□□ 1.08
DDX39A-212ENST00000590260 SMCR8Q8TEV9 937 aaPredicted RBP21.79■■□□□ 1.08
DDX39A-212ENST00000590260 CCDC17Q96LX7 622 aa21.79■■□□□ 1.08
DDX39A-212ENST00000590260 TXNRD2Q9NNW7 524 aa21.79■■□□□ 1.08
DDX39A-212ENST00000590260 PNMA3Q9UL41 463 aa21.79■■□□□ 1.08
DDX39A-212ENST00000590260 CENPFP49454 3210 aa21.78■■□□□ 1.08
DDX39A-212ENST00000590260 PRDM1O75626 825 aa21.78■■□□□ 1.08
DDX39A-212ENST00000590260 PABPC4Q13310 644 aaKnown RBP eCLIP21.78■■□□□ 1.08
DDX39A-212ENST00000590260 MCMDC2Q4G0Z9 681 aa21.78■■□□□ 1.08
DDX39A-212ENST00000590260 FEZ1Q99689 392 aa21.78■■□□□ 1.08
DDX39A-212ENST00000590260 IL25Q9H293 177 aa21.78■■□□□ 1.08
DDX39A-212ENST00000590260 INCENPQ9NQS7 918 aa21.78■■□□□ 1.08
DDX39A-212ENST00000590260 PARP14Q460N5 1801 aa21.78■■□□□ 1.08
DDX39A-212ENST00000590260 IGKV6D-41A0A0C4DH26 115 aa21.77■■□□□ 1.08
DDX39A-212ENST00000590260 HERVK_113P62684 666 aa21.77■■□□□ 1.08
DDX39A-212ENST00000590260 ICA1Q05084 483 aa21.77■■□□□ 1.08
DDX39A-212ENST00000590260 PPARAQ07869 468 aa21.77■■□□□ 1.08
DDX39A-212ENST00000590260 FAM110CQ1W6H9 321 aa21.77■■□□□ 1.08
DDX39A-212ENST00000590260 TTC22Q5TAA0 569 aa21.77■■□□□ 1.08
DDX39A-212ENST00000590260 NAPBQ9H115 298 aa21.77■■□□□ 1.08
DDX39A-212ENST00000590260 RBPJLQ9UBG7 517 aa21.77■■□□□ 1.08
DDX39A-212ENST00000590260 MORF4L1Q9UBU8 362 aa21.77■■□□□ 1.08
DDX39A-212ENST00000590260 GABRQQ9UN88 632 aa21.77■■□□□ 1.08
DDX39A-212ENST00000590260 TMX2Q9Y320 296 aa21.77■■□□□ 1.08
DDX39A-212ENST00000590260 PLXNB2O15031 1838 aa21.77■■□□□ 1.08
DDX39A-212ENST00000590260 A0A0G2JMZ2 1700 aa21.76■■□□□ 1.07
DDX39A-212ENST00000590260 CNMDO75829 334 aa21.76■■□□□ 1.07
DDX39A-212ENST00000590260 EEF2P13639 858 aaKnown RBP21.76■■□□□ 1.07
DDX39A-212ENST00000590260 USP14P54578 494 aa21.76■■□□□ 1.07
DDX39A-212ENST00000590260 CATSPERGQ6ZRH7 1159 aa21.76■■□□□ 1.07
DDX39A-212ENST00000590260 SKAP1Q86WV1 359 aa21.76■■□□□ 1.07
DDX39A-212ENST00000590260 SRRDQ9UH36 339 aa21.76■■□□□ 1.07
DDX39A-212ENST00000590260 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.76■■□□□ 1.07
DDX39A-212ENST00000590260 HSPD1P10809 573 aaKnown RBP21.75■■□□□ 1.07
DDX39A-212ENST00000590260 GCLCP48506 637 aaPredicted RBP21.75■■□□□ 1.07
DDX39A-212ENST00000590260 IRX3P78415 501 aaPredicted RBP21.75■■□□□ 1.07
DDX39A-212ENST00000590260 CTDSPL2Q05D32 466 aa21.75■■□□□ 1.07
DDX39A-212ENST00000590260 KIF22Q14807 665 aa21.75■■□□□ 1.07
DDX39A-212ENST00000590260 ALX1Q15699 326 aa21.75■■□□□ 1.07
DDX39A-212ENST00000590260 Q3C1V9 767 aa21.75■■□□□ 1.07
DDX39A-212ENST00000590260 RPAP3Q9H6T3 665 aaPredicted RBP21.75■■□□□ 1.07
DDX39A-212ENST00000590260 CCDC171Q6TFL3 1326 aa21.75■■□□□ 1.07
DDX39A-212ENST00000590260 USP17L15C9J2P7 530 aa21.74■■□□□ 1.07
DDX39A-212ENST00000590260 USP17L13C9JLJ4 530 aa21.74■■□□□ 1.07
DDX39A-212ENST00000590260 USP17L11C9JVI0 530 aa21.74■■□□□ 1.07
DDX39A-212ENST00000590260 USP17L18D6R9N7 530 aa21.74■■□□□ 1.07
DDX39A-212ENST00000590260 USP17L22D6RA61 530 aa21.74■■□□□ 1.07
DDX39A-212ENST00000590260 USP17L17D6RBQ6 530 aa21.74■■□□□ 1.07
DDX39A-212ENST00000590260 USP17L19D6RCP7 530 aa21.74■■□□□ 1.07
DDX39A-212ENST00000590260 USP17L20D6RJB6 530 aa21.74■■□□□ 1.07
DDX39A-212ENST00000590260 FMNL1O95466 1100 aaPredicted RBP21.74■■□□□ 1.07
DDX39A-212ENST00000590260 FGAP02671 866 aa21.74■■□□□ 1.07
DDX39A-212ENST00000590260 SOX10P56693 466 aa21.74■■□□□ 1.07
DDX39A-212ENST00000590260 PRKCZQ05513 592 aa21.74■■□□□ 1.07
DDX39A-212ENST00000590260 USP17L24Q0WX57 530 aa21.74■■□□□ 1.07
DDX39A-212ENST00000590260 NKX2-3Q8TAU0 364 aa21.74■■□□□ 1.07
DDX39A-212ENST00000590260 ARMC5Q96C12 935 aa21.74■■□□□ 1.07
DDX39A-212ENST00000590260 NACAP1Q9BZK3 213 aa21.74■■□□□ 1.07
DDX39A-212ENST00000590260 NBPF3Q9H094 633 aa21.74■■□□□ 1.07
DDX39A-212ENST00000590260 GNRH1P01148 92 aa21.73■■□□□ 1.07
DDX39A-212ENST00000590260 VCPKMTQ9H867 229 aa21.73■■□□□ 1.07
DDX39A-212ENST00000590260 KANSL2Q9H9L4 492 aa21.73■■□□□ 1.07
DDX39A-212ENST00000590260 MKNK2Q9HBH9 465 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms