RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 PTCH2Q9Y6C5 1203 aa14.47□□□□□ -0.09
TPM4-212ENST00000590180 AKR1B1P15121 316 aa14.46□□□□□ -0.09
TPM4-212ENST00000590180 HOXA7P31268 230 aaPredicted RBP14.46□□□□□ -0.09
TPM4-212ENST00000590180 GCLCP48506 637 aaPredicted RBP14.46□□□□□ -0.09
TPM4-212ENST00000590180 PRMT2P55345 433 aa14.46□□□□□ -0.09
TPM4-212ENST00000590180 SBK1Q52WX2 424 aa14.46□□□□□ -0.09
TPM4-212ENST00000590180 ZMYM1Q5SVZ6 1142 aa14.46□□□□□ -0.09
TPM4-212ENST00000590180 TMEM179Q6ZVK1 233 aa14.46□□□□□ -0.09
TPM4-212ENST00000590180 NBPF11Q86T75 865 aa14.46□□□□□ -0.09
TPM4-212ENST00000590180 RAET1EQ8TD07 263 aa14.46□□□□□ -0.09
TPM4-212ENST00000590180 RILPL2Q969X0 211 aa14.46□□□□□ -0.09
TPM4-212ENST00000590180 CCDC17Q96LX7 622 aa14.46□□□□□ -0.09
TPM4-212ENST00000590180 NACAP1Q9BZK3 213 aa14.46□□□□□ -0.09
TPM4-212ENST00000590180 MKNK2Q9HBH9 465 aa14.46□□□□□ -0.09
TPM4-212ENST00000590180 SRRDQ9UH36 339 aa14.46□□□□□ -0.09
TPM4-212ENST00000590180 PHIPQ8WWQ0 1821 aa14.45□□□□□ -0.1
TPM4-212ENST00000590180 SLC9C1Q4G0N8 1177 aa14.45□□□□□ -0.1
TPM4-212ENST00000590180 C16orf86Q6ZW13 317 aa14.45□□□□□ -0.1
TPM4-212ENST00000590180 IFNL3Q8IZI9 196 aa14.45□□□□□ -0.1
TPM4-212ENST00000590180 KIAA1683Q9H0B3 1180 aa14.45□□□□□ -0.1
TPM4-212ENST00000590180 ATAD5Q96QE3 1844 aa14.44□□□□□ -0.1
TPM4-212ENST00000590180 USP17L15C9J2P7 530 aa14.44□□□□□ -0.1
TPM4-212ENST00000590180 USP17L13C9JLJ4 530 aa14.44□□□□□ -0.1
TPM4-212ENST00000590180 USP17L11C9JVI0 530 aa14.44□□□□□ -0.1
TPM4-212ENST00000590180 USP17L18D6R9N7 530 aa14.44□□□□□ -0.1
TPM4-212ENST00000590180 USP17L22D6RA61 530 aa14.44□□□□□ -0.1
TPM4-212ENST00000590180 USP17L17D6RBQ6 530 aa14.44□□□□□ -0.1
TPM4-212ENST00000590180 USP17L19D6RCP7 530 aa14.44□□□□□ -0.1
TPM4-212ENST00000590180 USP17L20D6RJB6 530 aa14.44□□□□□ -0.1
TPM4-212ENST00000590180 TNPO2O14787 897 aaKnown RBP14.44□□□□□ -0.1
TPM4-212ENST00000590180 MYCP01106 439 aaPredicted RBP14.44□□□□□ -0.1
TPM4-212ENST00000590180 RGS19P49795 217 aa14.44□□□□□ -0.1
TPM4-212ENST00000590180 ATP2B2Q01814 1243 aa14.44□□□□□ -0.1
TPM4-212ENST00000590180 MLLT1Q03111 559 aaPredicted RBP14.44□□□□□ -0.1
TPM4-212ENST00000590180 USP17L24Q0WX57 530 aa14.44□□□□□ -0.1
TPM4-212ENST00000590180 CCDC129Q6ZRS4 1044 aa14.44□□□□□ -0.1
TPM4-212ENST00000590180 PLEKHM2Q8IWE5 1019 aa14.44□□□□□ -0.1
TPM4-212ENST00000590180 MYPNQ86TC9 1320 aa14.43□□□□□ -0.1
TPM4-212ENST00000590180 MYH7P12883 1935 aa14.43□□□□□ -0.1
TPM4-212ENST00000590180 A0A1W2PRG0 241 aa14.43□□□□□ -0.1
TPM4-212ENST00000590180 HERVK_113P62684 666 aa14.43□□□□□ -0.1
TPM4-212ENST00000590180 FAM110CQ1W6H9 321 aa14.43□□□□□ -0.1
TPM4-212ENST00000590180 ZNF444Q8N0Y2 327 aaPredicted RBP14.43□□□□□ -0.1
TPM4-212ENST00000590180 GPRC5AQ8NFJ5 357 aa14.43□□□□□ -0.1
TPM4-212ENST00000590180 SH3TC2Q8TF17 1288 aa14.43□□□□□ -0.1
TPM4-212ENST00000590180 COA7Q96BR5 231 aa14.43□□□□□ -0.1
TPM4-212ENST00000590180 ARMC5Q96C12 935 aa14.43□□□□□ -0.1
TPM4-212ENST00000590180 C12orf42Q96LP6 360 aa14.43□□□□□ -0.1
TPM4-212ENST00000590180 TMEM106CQ9BVX2 250 aa14.43□□□□□ -0.1
TPM4-212ENST00000590180 NAPBQ9H115 298 aa14.43□□□□□ -0.1
TPM4-212ENST00000590180 ARHGEF10LQ9HCE6 1279 aa14.43□□□□□ -0.1
TPM4-212ENST00000590180 BIN2Q9UBW5 565 aaPredicted RBP14.43□□□□□ -0.1
TPM4-212ENST00000590180 GABRQQ9UN88 632 aa14.43□□□□□ -0.1
TPM4-212ENST00000590180 PTPRFP10586 1907 aa14.43□□□□□ -0.1
TPM4-212ENST00000590180 BAZ2AQ9UIF9 1905 aaKnown RBP14.43□□□□□ -0.1
TPM4-212ENST00000590180 NAV1Q8NEY1 1877 aa14.42□□□□□ -0.1
TPM4-212ENST00000590180 PEX10O60683 326 aa14.42□□□□□ -0.1
TPM4-212ENST00000590180 ICA1Q05084 483 aa14.42□□□□□ -0.1
TPM4-212ENST00000590180 PRKCZQ05513 592 aa14.42□□□□□ -0.1
TPM4-212ENST00000590180 CATSPERGQ6ZRH7 1159 aa14.42□□□□□ -0.1
TPM4-212ENST00000590180 CLEC10AQ8IUN9 316 aa14.42□□□□□ -0.1
TPM4-212ENST00000590180 CCAR1Q8IX12 1150 aaKnown RBP14.42□□□□□ -0.1
TPM4-212ENST00000590180 PAGR1Q9BTK6 254 aa14.42□□□□□ -0.1
TPM4-212ENST00000590180 RPAP3Q9H6T3 665 aaPredicted RBP14.42□□□□□ -0.1
TPM4-212ENST00000590180 KANSL2Q9H9L4 492 aa14.42□□□□□ -0.1
TPM4-212ENST00000590180 ZNF287Q9HBT7 754 aa14.42□□□□□ -0.1
TPM4-212ENST00000590180 EPB41L4AQ9HCS5 686 aaPredicted RBP14.42□□□□□ -0.1
TPM4-212ENST00000590180 HELLSQ9NRZ9 838 aa14.42□□□□□ -0.1
TPM4-212ENST00000590180 RBPJLQ9UBG7 517 aa14.42□□□□□ -0.1
TPM4-212ENST00000590180 KIAA0100Q14667 2235 aaKnown RBP14.42□□□□□ -0.1
TPM4-212ENST00000590180 RAD21O60216 631 aa14.41□□□□□ -0.1
TPM4-212ENST00000590180 PRDM1O75626 825 aa14.41□□□□□ -0.1
TPM4-212ENST00000590180 SLC3A2P08195 630 aaKnown RBP14.41□□□□□ -0.1
TPM4-212ENST00000590180 EEF2P13639 858 aaKnown RBP14.41□□□□□ -0.1
TPM4-212ENST00000590180 VCAM1P19320 739 aa14.41□□□□□ -0.1
TPM4-212ENST00000590180 GRK4P32298 578 aa14.41□□□□□ -0.1
TPM4-212ENST00000590180 FLT3LGP49771 235 aa14.41□□□□□ -0.1
TPM4-212ENST00000590180 Q3C1V9 767 aa14.41□□□□□ -0.1
TPM4-212ENST00000590180 MCMDC2Q4G0Z9 681 aa14.41□□□□□ -0.1
TPM4-212ENST00000590180 SIAH1Q8IUQ4 282 aa14.41□□□□□ -0.1
TPM4-212ENST00000590180 FAM227BQ96M60 508 aa14.41□□□□□ -0.1
TPM4-212ENST00000590180 OSBPL3Q9H4L5 887 aa14.41□□□□□ -0.1
TPM4-212ENST00000590180 SH2D4AQ9H788 454 aa14.41□□□□□ -0.1
TPM4-212ENST00000590180 TXNRD2Q9NNW7 524 aa14.41□□□□□ -0.1
TPM4-212ENST00000590180 RASA1P20936 1047 aa14.4□□□□□ -0.1
TPM4-212ENST00000590180 SPICE1Q8N0Z3 855 aa14.4□□□□□ -0.1
TPM4-212ENST00000590180 GTF3C2Q8WUA4 911 aaPredicted RBP14.4□□□□□ -0.1
TPM4-212ENST00000590180 ZNF333Q96JL9 665 aa14.4□□□□□ -0.1
TPM4-212ENST00000590180 TANGO6Q9C0B7 1094 aa14.4□□□□□ -0.1
TPM4-212ENST00000590180 CWC22Q9HCG8 908 aaKnown RBP14.4□□□□□ -0.1
TPM4-212ENST00000590180 MORF4L1Q9UBU8 362 aa14.4□□□□□ -0.1
TPM4-212ENST00000590180 TMX2Q9Y320 296 aa14.4□□□□□ -0.1
TPM4-212ENST00000590180 ADCY3O60266 1144 aa14.39□□□□□ -0.11
TPM4-212ENST00000590180 SDSP20132 328 aa14.39□□□□□ -0.11
TPM4-212ENST00000590180 PDE4BQ07343 736 aa14.39□□□□□ -0.11
TPM4-212ENST00000590180 PPARAQ07869 468 aa14.39□□□□□ -0.11
TPM4-212ENST00000590180 NMIQ13287 307 aaPredicted RBP14.39□□□□□ -0.11
TPM4-212ENST00000590180 COG2Q14746 738 aa14.39□□□□□ -0.11
TPM4-212ENST00000590180 VPS53Q5VIR6 699 aa14.39□□□□□ -0.11
TPM4-212ENST00000590180 SAMD1Q6SPF0 538 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms