RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 NOVP48745 357 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 PPP2R5BQ15173 497 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 RTN1Q16799 776 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 CERKLQ49MI3 558 aaPredicted RBP20.37■□□□□ 0.85
CXXC1-212ENST00000589940 DPY19L2Q6NUT2 758 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 FANCBQ8NB91 859 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 NUP133Q8WUM0 1156 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 CEP95Q96GE4 821 aa20.37■□□□□ 0.85
CXXC1-212ENST00000589940 IGKV6D-41A0A0C4DH26 115 aa20.36■□□□□ 0.85
CXXC1-212ENST00000589940 CDKL5O76039 1030 aa20.36■□□□□ 0.85
CXXC1-212ENST00000589940 CPLX2Q6PUV4 134 aaKnown RBP20.36■□□□□ 0.85
CXXC1-212ENST00000589940 CCDC196A0A1B0GTZ2 297 aa20.35■□□□□ 0.85
CXXC1-212ENST00000589940 PDCP20941 246 aa20.35■□□□□ 0.85
CXXC1-212ENST00000589940 SYT1P21579 422 aa20.35■□□□□ 0.85
CXXC1-212ENST00000589940 DDX11Q96FC9 970 aa20.35■□□□□ 0.85
CXXC1-212ENST00000589940 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.35■□□□□ 0.85
CXXC1-212ENST00000589940 MTMR4Q9NYA4 1195 aa20.35■□□□□ 0.85
CXXC1-212ENST00000589940 CDAN1Q8IWY9 1227 aa20.35■□□□□ 0.85
CXXC1-212ENST00000589940 PNMA1Q8ND90 353 aa20.35■□□□□ 0.85
CXXC1-212ENST00000589940 TMEM47Q9BQJ4 181 aa20.35■□□□□ 0.85
CXXC1-212ENST00000589940 ADARB2Q9NS39 739 aaKnown RBP20.35■□□□□ 0.85
CXXC1-212ENST00000589940 MPHOSPH10O00566 681 aaKnown RBP20.34■□□□□ 0.85
CXXC1-212ENST00000589940 TBC1D12O60347 775 aa20.34■□□□□ 0.85
CXXC1-212ENST00000589940 APOBEC3FQ8IUX4 373 aaKnown RBP20.34■□□□□ 0.85
CXXC1-212ENST00000589940 L3MBTL3Q96JM7 780 aaPredicted RBP20.34■□□□□ 0.85
CXXC1-212ENST00000589940 ZDHHC9Q9Y397 364 aa20.34■□□□□ 0.85
CXXC1-212ENST00000589940 KIF3AQ9Y496 699 aa20.34■□□□□ 0.85
CXXC1-212ENST00000589940 STX6O43752 255 aa20.34■□□□□ 0.85
CXXC1-212ENST00000589940 BRD1O95696 1058 aa20.34■□□□□ 0.85
CXXC1-212ENST00000589940 PDIA4P13667 645 aaKnown RBP20.34■□□□□ 0.85
CXXC1-212ENST00000589940 HIRAP54198 1017 aaPredicted RBP20.34■□□□□ 0.85
CXXC1-212ENST00000589940 NTRK3Q16288 839 aa20.34■□□□□ 0.85
CXXC1-212ENST00000589940 ANGEL2Q5VTE6 544 aaKnown RBP20.34■□□□□ 0.85
CXXC1-212ENST00000589940 FAM184AQ8NB25 1140 aa20.34■□□□□ 0.85
CXXC1-212ENST00000589940 TEPSINQ96N21 525 aa20.34■□□□□ 0.85
CXXC1-212ENST00000589940 DEFB129Q9H1M3 183 aa20.34■□□□□ 0.85
CXXC1-212ENST00000589940 SCAF8Q9UPN6 1271 aaKnown RBP20.34■□□□□ 0.85
CXXC1-212ENST00000589940 GREB1LQ9C091 1923 aaPredicted RBP20.33■□□□□ 0.85
CXXC1-212ENST00000589940 TOP1P11387 765 aaKnown RBP20.33■□□□□ 0.85
CXXC1-212ENST00000589940 PPP4R3BQ5MIZ7 849 aa20.33■□□□□ 0.85
CXXC1-212ENST00000589940 LARP1BQ659C4 914 aaKnown RBP20.33■□□□□ 0.85
CXXC1-212ENST00000589940 RBM28Q9NW13 759 aaKnown RBP20.33■□□□□ 0.85
CXXC1-212ENST00000589940 WDR33Q9C0J8 1336 aaKnown RBP20.33■□□□□ 0.85
CXXC1-212ENST00000589940 MAP3K14Q99558 947 aa20.33■□□□□ 0.84
CXXC1-212ENST00000589940 PPFIA3O75145 1194 aa20.32■□□□□ 0.84
CXXC1-212ENST00000589940 TTLL1O95922 423 aa20.32■□□□□ 0.84
CXXC1-212ENST00000589940 FDPSP14324 419 aaKnown RBP20.32■□□□□ 0.84
CXXC1-212ENST00000589940 IFNAR1P17181 557 aa20.32■□□□□ 0.84
CXXC1-212ENST00000589940 MAP3K10Q02779 954 aa20.32■□□□□ 0.84
CXXC1-212ENST00000589940 TMEM179Q6ZVK1 233 aa20.32■□□□□ 0.84
CXXC1-212ENST00000589940 CTCFLQ8NI51 663 aaPredicted RBP20.32■□□□□ 0.84
CXXC1-212ENST00000589940 TNPO1Q92973 898 aaKnown RBP20.32■□□□□ 0.84
CXXC1-212ENST00000589940 GGA3Q9NZ52 723 aa20.32■□□□□ 0.84
CXXC1-212ENST00000589940 ABCB5Q2M3G0 1257 aa20.31■□□□□ 0.84
CXXC1-212ENST00000589940 ORC3Q9UBD5 711 aaPredicted RBP20.31■□□□□ 0.84
CXXC1-212ENST00000589940 GLTPD2A6NH11 291 aa20.31■□□□□ 0.84
CXXC1-212ENST00000589940 GDF11O95390 407 aa20.31■□□□□ 0.84
CXXC1-212ENST00000589940 KIF5BP33176 963 aa20.3■□□□□ 0.84
CXXC1-212ENST00000589940 MIGA2Q7L4E1 593 aa20.3■□□□□ 0.84
CXXC1-212ENST00000589940 CLEC10AQ8IUN9 316 aa20.3■□□□□ 0.84
CXXC1-212ENST00000589940 PHKBQ93100 1093 aa20.3■□□□□ 0.84
CXXC1-212ENST00000589940 KANSL2Q9H9L4 492 aa20.3■□□□□ 0.84
CXXC1-212ENST00000589940 PITPNM2Q9BZ72 1349 aa20.3■□□□□ 0.84
CXXC1-212ENST00000589940 RRP1BQ14684 758 aaKnown RBP20.3■□□□□ 0.84
CXXC1-212ENST00000589940 SHROOM1Q2M3G4 852 aaPredicted RBP20.3■□□□□ 0.84
CXXC1-212ENST00000589940 CABP5Q9NP86 173 aa20.3■□□□□ 0.84
CXXC1-212ENST00000589940 CLIP2Q9UDT6 1046 aa20.3■□□□□ 0.84
CXXC1-212ENST00000589940 MTMR6Q9Y217 621 aa20.3■□□□□ 0.84
CXXC1-212ENST00000589940 STK36Q9NRP7 1315 aa20.29■□□□□ 0.84
CXXC1-212ENST00000589940 ZSCAN22P10073 491 aaPredicted RBP20.29■□□□□ 0.84
CXXC1-212ENST00000589940 TMTC3Q6ZXV5 915 aa20.29■□□□□ 0.84
CXXC1-212ENST00000589940 PPP2R3BQ9Y5P8 575 aa20.29■□□□□ 0.84
CXXC1-212ENST00000589940 FMNL1O95466 1100 aaPredicted RBP20.29■□□□□ 0.84
CXXC1-212ENST00000589940 GH2P01242 217 aa20.29■□□□□ 0.84
CXXC1-212ENST00000589940 GUCY1A2P33402 732 aa20.29■□□□□ 0.84
CXXC1-212ENST00000589940 SSRP1Q08945 709 aaKnown RBP20.29■□□□□ 0.84
CXXC1-212ENST00000589940 GRM4Q14833 912 aa20.29■□□□□ 0.84
CXXC1-212ENST00000589940 SEPT2Q15019 361 aa20.29■□□□□ 0.84
CXXC1-212ENST00000589940 VPS37CA5D8V6 355 aaPredicted RBP20.28■□□□□ 0.84
CXXC1-212ENST00000589940 NBPF11Q86T75 865 aa20.28■□□□□ 0.84
CXXC1-212ENST00000589940 TRIM22Q8IYM9 498 aa20.28■□□□□ 0.84
CXXC1-212ENST00000589940 CMTR1Q8N1G2 835 aaKnown RBP20.28■□□□□ 0.84
CXXC1-212ENST00000589940 SLC26A6Q9BXS9 759 aa20.28■□□□□ 0.84
CXXC1-212ENST00000589940 NYAP2Q9P242 653 aa20.28■□□□□ 0.84
CXXC1-212ENST00000589940 PLEKHA8P1O95397 391 aa20.27■□□□□ 0.84
CXXC1-212ENST00000589940 JAG1P78504 1218 aa20.27■□□□□ 0.84
CXXC1-212ENST00000589940 ICA1Q05084 483 aa20.27■□□□□ 0.84
CXXC1-212ENST00000589940 FOXD4L5Q5VV16 416 aaPredicted RBP20.27■□□□□ 0.84
CXXC1-212ENST00000589940 FOXD4L4Q8WXT5 416 aaPredicted RBP20.27■□□□□ 0.84
CXXC1-212ENST00000589940 FUT2Q10981 343 aa20.27■□□□□ 0.84
CXXC1-212ENST00000589940 LRRC47Q8N1G4 583 aaKnown RBP20.27■□□□□ 0.84
CXXC1-212ENST00000589940 CCDC82Q8N4S0 544 aa20.27■□□□□ 0.84
CXXC1-212ENST00000589940 MKL1Q969V6 931 aa20.27■□□□□ 0.84
CXXC1-212ENST00000589940 HOOK2Q96ED9 719 aa20.27■□□□□ 0.84
CXXC1-212ENST00000589940 MAD2L2Q9UI95 211 aa20.27■□□□□ 0.84
CXXC1-212ENST00000589940 H3BQV1 296 aa20.26■□□□□ 0.83
CXXC1-212ENST00000589940 EEF2P13639 858 aaKnown RBP20.26■□□□□ 0.83
CXXC1-212ENST00000589940 GNAQP50148 359 aa20.26■□□□□ 0.83
CXXC1-212ENST00000589940 ATP2B2Q01814 1243 aa20.26■□□□□ 0.83
CXXC1-212ENST00000589940 NBPF12Q5TAG4 269 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms