RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 RCAN3Q9UKA8 241 aa25.52■■□□□ 1.68
TMC6-213ENST00000589933 PLXNB2O15031 1838 aa25.51■■□□□ 1.67
TMC6-213ENST00000589933 GLRX3O76003 335 aaKnown RBP25.51■■□□□ 1.67
TMC6-213ENST00000589933 CYP2B6P20813 491 aa25.51■■□□□ 1.67
TMC6-213ENST00000589933 ZYXQ15942 572 aaKnown RBP25.51■■□□□ 1.67
TMC6-213ENST00000589933 SHROOM1Q2M3G4 852 aaPredicted RBP25.51■■□□□ 1.67
TMC6-213ENST00000589933 ANKLE1Q8NAG6 615 aa25.51■■□□□ 1.67
TMC6-213ENST00000589933 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.51■■□□□ 1.676e-10■■■■□ 26.4
TMC6-213ENST00000589933 EVI5O60447 810 aa25.5■■□□□ 1.67
TMC6-213ENST00000589933 MYH7P12883 1935 aa25.5■■□□□ 1.67
TMC6-213ENST00000589933 XRCC5P13010 732 aaKnown RBP25.5■■□□□ 1.67
TMC6-213ENST00000589933 NECAB2Q7Z6G3 386 aa25.5■■□□□ 1.67
TMC6-213ENST00000589933 KIAA1683Q9H0B3 1180 aa25.5■■□□□ 1.67
TMC6-213ENST00000589933 CRISPLD2Q9H0B8 497 aa25.5■■□□□ 1.67
TMC6-213ENST00000589933 ZNF532Q9HCE3 1301 aa25.5■■□□□ 1.67
TMC6-213ENST00000589933 RBPJLQ9UBG7 517 aa25.5■■□□□ 1.67
TMC6-213ENST00000589933 RGS2P41220 211 aa25.49■■□□□ 1.67
TMC6-213ENST00000589933 CHRDL2Q6WN34 429 aa25.49■■□□□ 1.67
TMC6-213ENST00000589933 AMOTL1Q8IY63 956 aa25.49■■□□□ 1.67
TMC6-213ENST00000589933 TXNRD2Q9NNW7 524 aa25.49■■□□□ 1.67
TMC6-213ENST00000589933 RABGAP1Q9Y3P9 1069 aa25.49■■□□□ 1.67
TMC6-213ENST00000589933 ZKSCAN1P17029 563 aaPredicted RBP25.48■■□□□ 1.67
TMC6-213ENST00000589933 PLCD1P51178 756 aa25.48■■□□□ 1.67
TMC6-213ENST00000589933 DDRGK1Q96HY6 314 aa25.48■■□□□ 1.67
TMC6-213ENST00000589933 PAG1Q9NWQ8 432 aa25.48■■□□□ 1.67
TMC6-213ENST00000589933 DDX60LQ5H9U9 1706 aaKnown RBP25.48■■□□□ 1.67
TMC6-213ENST00000589933 MPHOSPH10O00566 681 aaKnown RBP25.47■■□□□ 1.67
TMC6-213ENST00000589933 SHMT1P34896 483 aa25.47■■□□□ 1.67
TMC6-213ENST00000589933 FXR1P51114 621 aaKnown RBP eCLIP25.47■■□□□ 1.67
TMC6-213ENST00000589933 PLEKHH3Q7Z736 793 aa25.47■■□□□ 1.67
TMC6-213ENST00000589933 MKI67P46013 3256 aaKnown RBP25.47■■□□□ 1.67
TMC6-213ENST00000589933 CATSPERGQ6ZRH7 1159 aa25.46■■□□□ 1.67
TMC6-213ENST00000589933 GPR142Q7Z601 462 aa25.46■■□□□ 1.67
TMC6-213ENST00000589933 SIRT2Q8IXJ6 389 aa25.46■■□□□ 1.67
TMC6-213ENST00000589933 TRIB2Q92519 343 aa25.46■■□□□ 1.67
TMC6-213ENST00000589933 PAWRQ96IZ0 340 aaKnown RBP25.46■■□□□ 1.67
TMC6-213ENST00000589933 BOLA2Q9H3K6 86 aa25.46■■□□□ 1.67
TMC6-213ENST00000589933 SWAP70Q9UH65 585 aa25.46■■□□□ 1.67
TMC6-213ENST00000589933 ATP5JP18859 108 aa25.45■■□□□ 1.66
TMC6-213ENST00000589933 VCAM1P19320 739 aa25.45■■□□□ 1.66
TMC6-213ENST00000589933 Q3C1V9 767 aa25.45■■□□□ 1.66
TMC6-213ENST00000589933 WDR78Q5VTH9 848 aa25.45■■□□□ 1.66
TMC6-213ENST00000589933 ZSCAN25Q6NSZ9 544 aa25.45■■□□□ 1.66
TMC6-213ENST00000589933 DCP1AQ9NPI6 582 aaPredicted RBP25.45■■□□□ 1.66
TMC6-213ENST00000589933 IVNS1ABPQ9Y6Y0 642 aa25.45■■□□□ 1.66
TMC6-213ENST00000589933 BAZ2AQ9UIF9 1905 aaKnown RBP25.45■■□□□ 1.66
TMC6-213ENST00000589933 PRKAR2AP13861 404 aaKnown RBP25.44■■□□□ 1.66
TMC6-213ENST00000589933 GABPAQ06546 454 aa25.44■■□□□ 1.66
TMC6-213ENST00000589933 APBA2Q99767 749 aa25.44■■□□□ 1.66
TMC6-213ENST00000589933 LRRCC1Q9C099 1032 aa25.44■■□□□ 1.66
TMC6-213ENST00000589933 NBPF3Q9H094 633 aa25.44■■□□□ 1.66
TMC6-213ENST00000589933 ATP8A2Q9NTI2 1148 aa25.44■■□□□ 1.66
TMC6-213ENST00000589933 TCRBV5S4A2TA0A5A2 114 aa25.43■■□□□ 1.66
TMC6-213ENST00000589933 PEX10O60683 326 aa25.43■■□□□ 1.66
TMC6-213ENST00000589933 SEPT2Q15019 361 aa25.43■■□□□ 1.66
TMC6-213ENST00000589933 LCORLQ8N3X6 602 aa25.43■■□□□ 1.66
TMC6-213ENST00000589933 ACER1Q8TDN7 264 aa25.43■■□□□ 1.66
TMC6-213ENST00000589933 SDR42E1Q8WUS8 393 aa25.43■■□□□ 1.66
TMC6-213ENST00000589933 HAUS7Q99871 368 aa25.43■■□□□ 1.66
TMC6-213ENST00000589933 PORCNQ9H237 461 aa25.43■■□□□ 1.66
TMC6-213ENST00000589933 RPAP3Q9H6T3 665 aaPredicted RBP25.43■■□□□ 1.66
TMC6-213ENST00000589933 BRCA2P51587 3418 aa25.42■■□□□ 1.66
TMC6-213ENST00000589933 ADD2P35612 726 aa25.42■■□□□ 1.66
TMC6-213ENST00000589933 TRIM32Q13049 653 aa25.42■■□□□ 1.66
TMC6-213ENST00000589933 MORN1Q5T089 497 aa25.42■■□□□ 1.66
TMC6-213ENST00000589933 LBX2Q6XYB7 198 aa25.42■■□□□ 1.66
TMC6-213ENST00000589933 TMEM179Q6ZVK1 233 aa25.42■■□□□ 1.66
TMC6-213ENST00000589933 SH2D4AQ9H788 454 aa25.42■■□□□ 1.66
TMC6-213ENST00000589933 ARMT1Q9H993 441 aa25.42■■□□□ 1.66
TMC6-213ENST00000589933 TRIOBPQ9H2D6 2365 aa25.42■■□□□ 1.66
TMC6-213ENST00000589933 MAP2K5Q13163 448 aa25.41■■□□□ 1.66
TMC6-213ENST00000589933 MAP3K21Q5TCX8 1036 aa25.41■■□□□ 1.66
TMC6-213ENST00000589933 EDC3Q96F86 508 aaKnown RBP25.41■■□□□ 1.66
TMC6-213ENST00000589933 ARHGEF10LQ9HCE6 1279 aa25.41■■□□□ 1.66
TMC6-213ENST00000589933 HOXC10Q9NYD6 342 aa25.41■■□□□ 1.66
TMC6-213ENST00000589933 ALPK3Q96L96 1907 aa25.4■■□□□ 1.66
TMC6-213ENST00000589933 SLC15A5A6NIM6 579 aa25.4■■□□□ 1.66
TMC6-213ENST00000589933 MBD4O95243 580 aa25.4■■□□□ 1.66
TMC6-213ENST00000589933 COG2Q14746 738 aa25.4■■□□□ 1.66
TMC6-213ENST00000589933 UBE3CQ15386 1083 aa25.4■■□□□ 1.66
TMC6-213ENST00000589933 MFSD14CQ5VZR4 134 aa25.4■■□□□ 1.66
TMC6-213ENST00000589933 USP6NLQ92738 828 aa25.4■■□□□ 1.66
TMC6-213ENST00000589933 CCDC17Q96LX7 622 aa25.4■■□□□ 1.66
TMC6-213ENST00000589933 C11orf49Q9H6J7 331 aa25.4■■□□□ 1.66
TMC6-213ENST00000589933 RBM27Q9P2N5 1060 aaKnown RBP25.4■■□□□ 1.66
TMC6-213ENST00000589933 OGDHLQ9ULD0 1010 aa25.4■■□□□ 1.66
TMC6-213ENST00000589933 GUCY1A2P33402 732 aa25.39■■□□□ 1.66
TMC6-213ENST00000589933 GPATCH3Q96I76 525 aa25.39■■□□□ 1.66
TMC6-213ENST00000589933 TANGO6Q9C0B7 1094 aa25.39■■□□□ 1.66
TMC6-213ENST00000589933 CACNB2Q08289 660 aaPredicted RBP25.38■■□□□ 1.65
TMC6-213ENST00000589933 DIS3LQ8TF46 1054 aaKnown RBP25.38■■□□□ 1.65
TMC6-213ENST00000589933 LPAR1Q92633 364 aa25.38■■□□□ 1.65
TMC6-213ENST00000589933 A0A1W2PPC1 479 aa25.37■■□□□ 1.65
TMC6-213ENST00000589933 SPDYE16A6NNV3 312 aaPredicted RBP25.37■■□□□ 1.65
TMC6-213ENST00000589933 PTPREP23469 700 aa25.37■■□□□ 1.65
TMC6-213ENST00000589933 CNMDO75829 334 aa25.36■■□□□ 1.65
TMC6-213ENST00000589933 ATP2B2Q01814 1243 aa25.36■■□□□ 1.65
TMC6-213ENST00000589933 MB21D1Q8N884 522 aa25.36■■□□□ 1.65
TMC6-213ENST00000589933 SLC4A4Q9Y6R1 1079 aa25.36■■□□□ 1.65
TMC6-213ENST00000589933 STRNO43815 780 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms