RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-215ENST00000589883 METTL16Q86W50 562 aaKnown RBP23.28■■□□□ 1.32
PTBP1-215ENST00000589883 DOCK3Q8IZD9 2030 aa23.28■■□□□ 1.32
PTBP1-215ENST00000589883 FXR1P51114 621 aaKnown RBP eCLIP23.27■■□□□ 1.32
PTBP1-215ENST00000589883 MTMR2Q13614 643 aa23.27■■□□□ 1.32
PTBP1-215ENST00000589883 RRP1BQ14684 758 aaKnown RBP23.27■■□□□ 1.32
PTBP1-215ENST00000589883 LRRFIP1Q32MZ4 808 aaKnown RBP23.27■■□□□ 1.32
PTBP1-215ENST00000589883 MAGEB6P1A0A0J9YX57 407 aa23.26■■□□□ 1.31
PTBP1-215ENST00000589883 USP17L10C9JJH3 530 aa23.26■■□□□ 1.31
PTBP1-215ENST00000589883 ZFYP08048 801 aaPredicted RBP23.26■■□□□ 1.31
PTBP1-215ENST00000589883 HOXA7P31268 230 aaPredicted RBP23.26■■□□□ 1.31
PTBP1-215ENST00000589883 GTF3C2Q8WUA4 911 aaPredicted RBP23.26■■□□□ 1.31
PTBP1-215ENST00000589883 DEFB118Q96PH6 123 aa23.26■■□□□ 1.31
PTBP1-215ENST00000589883 PALD1Q9ULE6 856 aa23.26■■□□□ 1.31
PTBP1-215ENST00000589883 SDSP20132 328 aa23.25■■□□□ 1.31
PTBP1-215ENST00000589883 APPBP2Q92624 585 aa23.25■■□□□ 1.31
PTBP1-215ENST00000589883 RIOK1Q9BRS2 568 aaKnown RBP23.25■■□□□ 1.31
PTBP1-215ENST00000589883 PAK6Q9NQU5 681 aaPredicted RBP23.25■■□□□ 1.31
PTBP1-215ENST00000589883 MORF4L1Q9UBU8 362 aa23.25■■□□□ 1.31
PTBP1-215ENST00000589883 GTF3C3Q9Y5Q9 886 aa23.25■■□□□ 1.31
PTBP1-215ENST00000589883 FOCADQ5VW36 1801 aa23.24■■□□□ 1.31
PTBP1-215ENST00000589883 MBD4O95243 580 aa23.24■■□□□ 1.31
PTBP1-215ENST00000589883 HMGCRP04035 888 aa23.24■■□□□ 1.31
PTBP1-215ENST00000589883 USP5P45974 858 aa23.24■■□□□ 1.31
PTBP1-215ENST00000589883 LCORLQ8N3X6 602 aa23.24■■□□□ 1.31
PTBP1-215ENST00000589883 OSBP2Q969R2 916 aa23.24■■□□□ 1.31
PTBP1-215ENST00000589883 PUS7LQ9H0K6 701 aaKnown RBP23.24■■□□□ 1.31
PTBP1-215ENST00000589883 ARMT1Q9H993 441 aa23.24■■□□□ 1.31
PTBP1-215ENST00000589883 ZBTB21Q9ULJ3 1066 aa23.24■■□□□ 1.31
PTBP1-215ENST00000589883 MYH7P12883 1935 aa23.23■■□□□ 1.31
PTBP1-215ENST00000589883 CHRDL2Q6WN34 429 aa23.23■■□□□ 1.31
PTBP1-215ENST00000589883 GPRC5AQ8NFJ5 357 aa23.23■■□□□ 1.31
PTBP1-215ENST00000589883 SEC62Q99442 399 aaKnown RBP23.23■■□□□ 1.31
PTBP1-215ENST00000589883 DNAJC18Q9H819 358 aa23.23■■□□□ 1.31
PTBP1-215ENST00000589883 SAP30BPQ9UHR5 308 aaKnown RBP23.23■■□□□ 1.31
PTBP1-215ENST00000589883 CDK5RAP2Q96SN8 1893 aa23.23■■□□□ 1.31
PTBP1-215ENST00000589883 CCAR1Q8IX12 1150 aaKnown RBP23.22■■□□□ 1.31
PTBP1-215ENST00000589883 CRISPLD2Q9H0B8 497 aa23.22■■□□□ 1.31
PTBP1-215ENST00000589883 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.22■■□□□ 1.313e-9■■□□□ 13.8
PTBP1-215ENST00000589883 SIPA1L1O43166 1804 aa23.22■■□□□ 1.31
PTBP1-215ENST00000589883 TRIOBPQ9H2D6 2365 aa23.21■■□□□ 1.31
PTBP1-215ENST00000589883 M0R2C6 588 aa23.21■■□□□ 1.31
PTBP1-215ENST00000589883 EVI5O60447 810 aa23.21■■□□□ 1.31
PTBP1-215ENST00000589883 GDF11O95390 407 aa23.21■■□□□ 1.31
PTBP1-215ENST00000589883 HERVK_113P62684 666 aa23.21■■□□□ 1.31
PTBP1-215ENST00000589883 ZMYM1Q5SVZ6 1142 aa23.21■■□□□ 1.31
PTBP1-215ENST00000589883 USP17L2Q6R6M4 530 aa23.21■■□□□ 1.31
PTBP1-215ENST00000589883 TTC6Q86TZ1 520 aa23.21■■□□□ 1.31
PTBP1-215ENST00000589883 ANKLE1Q8NAG6 615 aa23.21■■□□□ 1.31
PTBP1-215ENST00000589883 SOCS4Q8WXH5 440 aa23.21■■□□□ 1.31
PTBP1-215ENST00000589883 HMX1Q9NP08 348 aaPredicted RBP23.21■■□□□ 1.31
PTBP1-215ENST00000589883 GJD2Q9UKL4 321 aa23.21■■□□□ 1.31
PTBP1-215ENST00000589883 RPTORQ8N122 1335 aa23.2■■□□□ 1.3
PTBP1-215ENST00000589883 NECAB2Q7Z6G3 386 aa23.2■■□□□ 1.3
PTBP1-215ENST00000589883 TRMT44Q8IYL2 757 aaKnown RBP23.2■■□□□ 1.3
PTBP1-215ENST00000589883 FAM227BQ96M60 508 aa23.2■■□□□ 1.3
PTBP1-215ENST00000589883 P2RX7Q99572 595 aaKnown RBP23.2■■□□□ 1.3
PTBP1-215ENST00000589883 NUDT12Q9BQG2 462 aa23.2■■□□□ 1.3
PTBP1-215ENST00000589883 CRNKL1Q9BZJ0 848 aaKnown RBP23.2■■□□□ 1.3
PTBP1-215ENST00000589883 SERPINB13Q9UIV8 391 aa23.2■■□□□ 1.3
PTBP1-215ENST00000589883 MAPK4P31152 587 aa23.19■■□□□ 1.3
PTBP1-215ENST00000589883 NMIQ13287 307 aaPredicted RBP23.19■■□□□ 1.3
PTBP1-215ENST00000589883 FEZ1Q99689 392 aa23.19■■□□□ 1.3
PTBP1-215ENST00000589883 EHD4Q9H223 541 aa23.19■■□□□ 1.3
PTBP1-215ENST00000589883 DIAPH3Q9NSV4 1193 aa23.19■■□□□ 1.3
PTBP1-215ENST00000589883 MYH1P12882 1939 aa23.19■■□□□ 1.3
PTBP1-215ENST00000589883 A0A0D9SFI3 127 aa23.18■■□□□ 1.3
PTBP1-215ENST00000589883 GPAA1O43292 621 aa23.18■■□□□ 1.3
PTBP1-215ENST00000589883 PRKAB2O43741 272 aa23.18■■□□□ 1.3
PTBP1-215ENST00000589883 XRCC5P13010 732 aaKnown RBP23.18■■□□□ 1.3
PTBP1-215ENST00000589883 USP14P54578 494 aa23.18■■□□□ 1.3
PTBP1-215ENST00000589883 CCDC129Q6ZRS4 1044 aa23.18■■□□□ 1.3
PTBP1-215ENST00000589883 SDR42E1Q8WUS8 393 aa23.18■■□□□ 1.3
PTBP1-215ENST00000589883 GH2P01242 217 aa23.17■■□□□ 1.3
PTBP1-215ENST00000589883 JAG1P78504 1218 aa23.17■■□□□ 1.3
PTBP1-215ENST00000589883 TATDN1Q6P1N9 297 aa23.17■■□□□ 1.3
PTBP1-215ENST00000589883 STRBPQ96SI9 672 aaKnown RBP23.17■■□□□ 1.3
PTBP1-215ENST00000589883 CABP5Q9NP86 173 aa23.17■■□□□ 1.3
PTBP1-215ENST00000589883 RBM27Q9P2N5 1060 aaKnown RBP23.17■■□□□ 1.3
PTBP1-215ENST00000589883 SLC4A4Q9Y6R1 1079 aa23.17■■□□□ 1.3
PTBP1-215ENST00000589883 CYP2B6P20813 491 aa23.16■■□□□ 1.3
PTBP1-215ENST00000589883 ERVK-9P63128 1117 aa23.16■■□□□ 1.3
PTBP1-215ENST00000589883 ERVK-24P63145 666 aa23.16■■□□□ 1.3
PTBP1-215ENST00000589883 CERKLQ49MI3 558 aaPredicted RBP23.16■■□□□ 1.3
PTBP1-215ENST00000589883 BMP2KLQ5H9B9 411 aa23.16■■□□□ 1.3
PTBP1-215ENST00000589883 CWC27Q6UX04 472 aaKnown RBP23.16■■□□□ 1.3
PTBP1-215ENST00000589883 TICAM2Q86XR7 235 aa23.16■■□□□ 1.3
PTBP1-215ENST00000589883 PAWRQ96IZ0 340 aaKnown RBP23.16■■□□□ 1.3
PTBP1-215ENST00000589883 C12orf42Q96LP6 360 aa23.16■■□□□ 1.3
PTBP1-215ENST00000589883 CWC22Q9HCG8 908 aaKnown RBP23.16■■□□□ 1.3
PTBP1-215ENST00000589883 HELLSQ9NRZ9 838 aa23.16■■□□□ 1.3
PTBP1-215ENST00000589883 HIP1O00291 1037 aa23.15■■□□□ 1.3
PTBP1-215ENST00000589883 CCNA1P78396 465 aa23.15■■□□□ 1.3
PTBP1-215ENST00000589883 EMILIN3Q9NT22 766 aa23.15■■□□□ 1.3
PTBP1-215ENST00000589883 RBPJLQ9UBG7 517 aa23.15■■□□□ 1.3
PTBP1-215ENST00000589883 A0A1W2PPC1 479 aa23.14■■□□□ 1.29
PTBP1-215ENST00000589883 USP17L15C9J2P7 530 aa23.14■■□□□ 1.29
PTBP1-215ENST00000589883 USP17L13C9JLJ4 530 aa23.14■■□□□ 1.29
PTBP1-215ENST00000589883 USP17L11C9JVI0 530 aa23.14■■□□□ 1.29
PTBP1-215ENST00000589883 USP17L18D6R9N7 530 aa23.14■■□□□ 1.29
PTBP1-215ENST00000589883 USP17L22D6RA61 530 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms