RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 MKNK2Q9HBH9 465 aa16.85■□□□□ 0.29
CLPTM1-210ENST00000589158 EMILIN3Q9NT22 766 aa16.85■□□□□ 0.29
CLPTM1-210ENST00000589158 HPS5Q9UPZ3 1129 aa16.85■□□□□ 0.29
CLPTM1-210ENST00000589158 PDE4AP27815 886 aa16.84■□□□□ 0.29
CLPTM1-210ENST00000589158 USP14P54578 494 aa16.84■□□□□ 0.29
CLPTM1-210ENST00000589158 IRX3P78415 501 aaPredicted RBP16.84■□□□□ 0.29
CLPTM1-210ENST00000589158 CAP1Q01518 475 aa16.84■□□□□ 0.29
CLPTM1-210ENST00000589158 TICAM2Q86XR7 235 aa16.84■□□□□ 0.29
CLPTM1-210ENST00000589158 ASCC2Q9H1I8 757 aaPredicted RBP16.84■□□□□ 0.29
CLPTM1-210ENST00000589158 A0A0D9SFI3 127 aa16.83■□□□□ 0.28
CLPTM1-210ENST00000589158 FMNL1O95466 1100 aaPredicted RBP16.83■□□□□ 0.28
CLPTM1-210ENST00000589158 BCRP11274 1271 aa16.83■□□□□ 0.28
CLPTM1-210ENST00000589158 SDSP20132 328 aa16.83■□□□□ 0.28
CLPTM1-210ENST00000589158 PSMC4P43686 418 aa16.83■□□□□ 0.28
CLPTM1-210ENST00000589158 NMIQ13287 307 aaPredicted RBP16.83■□□□□ 0.28
CLPTM1-210ENST00000589158 MCMDC2Q4G0Z9 681 aa16.83■□□□□ 0.28
CLPTM1-210ENST00000589158 KIAA1683Q9H0B3 1180 aa16.83■□□□□ 0.28
CLPTM1-210ENST00000589158 PTPN22Q9Y2R2 807 aa16.83■□□□□ 0.28
CLPTM1-210ENST00000589158 MYH7P12883 1935 aa16.82■□□□□ 0.28
CLPTM1-210ENST00000589158 PHIPQ8WWQ0 1821 aa16.82■□□□□ 0.28
CLPTM1-210ENST00000589158 HOXA7P31268 230 aaPredicted RBP16.82■□□□□ 0.28
CLPTM1-210ENST00000589158 ATP2B2Q01814 1243 aa16.82■□□□□ 0.28
CLPTM1-210ENST00000589158 ICA1Q05084 483 aa16.82■□□□□ 0.28
CLPTM1-210ENST00000589158 CLEC10AQ8IUN9 316 aa16.82■□□□□ 0.28
CLPTM1-210ENST00000589158 ANKRD13CQ8N6S4 541 aa16.82■□□□□ 0.28
CLPTM1-210ENST00000589158 ZNF287Q9HBT7 754 aa16.82■□□□□ 0.28
CLPTM1-210ENST00000589158 ARHGEF10LQ9HCE6 1279 aa16.82■□□□□ 0.28
CLPTM1-210ENST00000589158 ATAD5Q96QE3 1844 aa16.82■□□□□ 0.28
CLPTM1-210ENST00000589158 A0A1W2PRG0 241 aa16.81■□□□□ 0.28
CLPTM1-210ENST00000589158 SLC3A2P08195 630 aaKnown RBP16.81■□□□□ 0.28
CLPTM1-210ENST00000589158 GCLCP48506 637 aaPredicted RBP16.81■□□□□ 0.28
CLPTM1-210ENST00000589158 VPS53Q5VIR6 699 aa16.81■□□□□ 0.28
CLPTM1-210ENST00000589158 TRIM47Q96LD4 638 aa16.81■□□□□ 0.28
CLPTM1-210ENST00000589158 C12orf42Q96LP6 360 aa16.81■□□□□ 0.28
CLPTM1-210ENST00000589158 P2RX7Q99572 595 aaKnown RBP16.81■□□□□ 0.28
CLPTM1-210ENST00000589158 DIAPH3Q9NSV4 1193 aa16.81■□□□□ 0.28
CLPTM1-210ENST00000589158 ROBO3Q96MS0 1386 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 USP17L15C9J2P7 530 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 USP17L13C9JLJ4 530 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 USP17L11C9JVI0 530 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 USP17L18D6R9N7 530 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 USP17L22D6RA61 530 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 USP17L17D6RBQ6 530 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 USP17L19D6RCP7 530 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 USP17L20D6RJB6 530 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 PRDM1O75626 825 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 GNRH1P01148 92 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 VCAM1P19320 739 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 RASA1P20936 1047 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 HOXD10P28358 340 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 CTGFP29279 349 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 FCGRTP55899 365 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 PPARAQ07869 468 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 USP17L24Q0WX57 530 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 ZNF444Q8N0Y2 327 aaPredicted RBP16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 SH2D4AQ9H788 454 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 KANSL2Q9H9L4 492 aa16.8■□□□□ 0.28
CLPTM1-210ENST00000589158 HIP1O00291 1037 aa16.79■□□□□ 0.28
CLPTM1-210ENST00000589158 FOXP2O15409 715 aa16.79■□□□□ 0.28
CLPTM1-210ENST00000589158 HERVK_113P62684 666 aa16.79■□□□□ 0.28
CLPTM1-210ENST00000589158 PDE4BQ07343 736 aa16.79■□□□□ 0.28
CLPTM1-210ENST00000589158 FAM110CQ1W6H9 321 aa16.79■□□□□ 0.28
CLPTM1-210ENST00000589158 TTC22Q5TAA0 569 aa16.79■□□□□ 0.28
CLPTM1-210ENST00000589158 CWC27Q6UX04 472 aaKnown RBP16.79■□□□□ 0.28
CLPTM1-210ENST00000589158 ZNF589Q86UQ0 364 aaPredicted RBP16.79■□□□□ 0.28
CLPTM1-210ENST00000589158 SIAH1Q8IUQ4 282 aa16.79■□□□□ 0.28
CLPTM1-210ENST00000589158 PTCH2Q9Y6C5 1203 aa16.79■□□□□ 0.28
CLPTM1-210ENST00000589158 CCDC171Q6TFL3 1326 aa16.78■□□□□ 0.28
CLPTM1-210ENST00000589158 EEF2P13639 858 aaKnown RBP16.78■□□□□ 0.28
CLPTM1-210ENST00000589158 MFAP1P55081 439 aaKnown RBP16.78■□□□□ 0.28
CLPTM1-210ENST00000589158 PRMT2P55345 433 aa16.78■□□□□ 0.28
CLPTM1-210ENST00000589158 RPAP3Q9H6T3 665 aaPredicted RBP16.78■□□□□ 0.28
CLPTM1-210ENST00000589158 SRRDQ9UH36 339 aa16.78■□□□□ 0.28
CLPTM1-210ENST00000589158 TMX2Q9Y320 296 aa16.78■□□□□ 0.28
CLPTM1-210ENST00000589158 LOC285556D6RIA3 1793 aa16.77■□□□□ 0.28
CLPTM1-210ENST00000589158 BAZ2AQ9UIF9 1905 aaKnown RBP16.77■□□□□ 0.28
CLPTM1-210ENST00000589158 TNPO2O14787 897 aaKnown RBP16.77■□□□□ 0.28
CLPTM1-210ENST00000589158 RAD21O60216 631 aa16.77■□□□□ 0.28
CLPTM1-210ENST00000589158 HSPD1P10809 573 aaKnown RBP16.77■□□□□ 0.28
CLPTM1-210ENST00000589158 GSPT1P15170 499 aaKnown RBP16.77■□□□□ 0.28
CLPTM1-210ENST00000589158 CTDSPL2Q05D32 466 aa16.77■□□□□ 0.28
CLPTM1-210ENST00000589158 ALX1Q15699 326 aa16.77■□□□□ 0.28
CLPTM1-210ENST00000589158 CATSPERGQ6ZRH7 1159 aa16.77■□□□□ 0.28
CLPTM1-210ENST00000589158 SPICE1Q8N0Z3 855 aa16.77■□□□□ 0.28
CLPTM1-210ENST00000589158 PAGR1Q9BTK6 254 aa16.77■□□□□ 0.28
CLPTM1-210ENST00000589158 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.77■□□□□ 0.28
CLPTM1-210ENST00000589158 MYPNQ86TC9 1320 aa16.76■□□□□ 0.27
CLPTM1-210ENST00000589158 PEX10O60683 326 aa16.76■□□□□ 0.27
CLPTM1-210ENST00000589158 FGAP02671 866 aa16.76■□□□□ 0.27
CLPTM1-210ENST00000589158 SOX10P56693 466 aa16.76■□□□□ 0.27
CLPTM1-210ENST00000589158 SLC9C1Q4G0N8 1177 aa16.76■□□□□ 0.27
CLPTM1-210ENST00000589158 GPRC5AQ8NFJ5 357 aa16.76■□□□□ 0.27
CLPTM1-210ENST00000589158 RAET1EQ8TD07 263 aa16.76■□□□□ 0.27
CLPTM1-210ENST00000589158 GTF3C2Q8WUA4 911 aaPredicted RBP16.76■□□□□ 0.27
CLPTM1-210ENST00000589158 TANGO6Q9C0B7 1094 aa16.76■□□□□ 0.27
CLPTM1-210ENST00000589158 VCPKMTQ9H867 229 aa16.76■□□□□ 0.27
CLPTM1-210ENST00000589158 MORF4L1Q9UBU8 362 aa16.76■□□□□ 0.27
CLPTM1-210ENST00000589158 PTPRFP10586 1907 aa16.76■□□□□ 0.27
CLPTM1-210ENST00000589158 NEFLP07196 543 aa16.75■□□□□ 0.27
CLPTM1-210ENST00000589158 TSPY3P0CV98 308 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms