RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 CABP5Q9NP86 173 aa13.9□□□□□ -0.18
RFX1-204ENST00000588885 EMILIN3Q9NT22 766 aa13.9□□□□□ -0.18
RFX1-204ENST00000588885 GINM1Q9NU53 330 aa13.9□□□□□ -0.18
RFX1-204ENST00000588885 ZBTB47Q9UFB7 747 aaPredicted RBP13.9□□□□□ -0.18
RFX1-204ENST00000588885 GABRQQ9UN88 632 aa13.9□□□□□ -0.18
RFX1-204ENST00000588885 MYPNQ86TC9 1320 aa13.9□□□□□ -0.19
RFX1-204ENST00000588885 C19orf81C9J6K1 198 aa13.89□□□□□ -0.19
RFX1-204ENST00000588885 USP17L12C9JPN9 530 aa13.89□□□□□ -0.19
RFX1-204ENST00000588885 USP17L21D6R901 530 aa13.89□□□□□ -0.19
RFX1-204ENST00000588885 TNPO2O14787 897 aaKnown RBP13.89□□□□□ -0.19
RFX1-204ENST00000588885 RNF113AO15541 343 aaKnown RBP13.89□□□□□ -0.19
RFX1-204ENST00000588885 SLC34A2O95436 690 aa13.89□□□□□ -0.19
RFX1-204ENST00000588885 IGHDP01880 384 aa13.89□□□□□ -0.19
RFX1-204ENST00000588885 EN2P19622 333 aaPredicted RBP13.89□□□□□ -0.19
RFX1-204ENST00000588885 GUCY1A2P33402 732 aa13.89□□□□□ -0.19
RFX1-204ENST00000588885 GABPAQ06546 454 aa13.89□□□□□ -0.19
RFX1-204ENST00000588885 SEPT2Q15019 361 aa13.89□□□□□ -0.19
RFX1-204ENST00000588885 USP17L2Q6R6M4 530 aa13.89□□□□□ -0.19
RFX1-204ENST00000588885 STK11IPQ8N1F8 1099 aa13.89□□□□□ -0.19
RFX1-204ENST00000588885 KBTBD3Q8NAB2 608 aa13.89□□□□□ -0.19
RFX1-204ENST00000588885 ATP8A2Q9NTI2 1148 aa13.89□□□□□ -0.19
RFX1-204ENST00000588885 BIN2Q9UBW5 565 aaPredicted RBP13.89□□□□□ -0.19
RFX1-204ENST00000588885 TAOK2Q9UL54 1235 aa13.89□□□□□ -0.19
RFX1-204ENST00000588885 PRMT2P55345 433 aa13.88□□□□□ -0.19
RFX1-204ENST00000588885 OSBP2Q969R2 916 aa13.88□□□□□ -0.19
RFX1-204ENST00000588885 DDRGK1Q96HY6 314 aa13.88□□□□□ -0.19
RFX1-204ENST00000588885 STRBPQ96SI9 672 aaKnown RBP13.88□□□□□ -0.19
RFX1-204ENST00000588885 CDK5RAP2Q96SN8 1893 aa13.88□□□□□ -0.19
RFX1-204ENST00000588885 PHIPQ8WWQ0 1821 aa13.87□□□□□ -0.19
RFX1-204ENST00000588885 ERC2O15083 957 aa13.87□□□□□ -0.19
RFX1-204ENST00000588885 MX1P20591 662 aa13.87□□□□□ -0.19
RFX1-204ENST00000588885 HOXA7P31268 230 aaPredicted RBP13.87□□□□□ -0.19
RFX1-204ENST00000588885 GRK4P32298 578 aa13.87□□□□□ -0.19
RFX1-204ENST00000588885 GCLCP48506 637 aaPredicted RBP13.87□□□□□ -0.19
RFX1-204ENST00000588885 FLT3LGP49771 235 aa13.87□□□□□ -0.19
RFX1-204ENST00000588885 HDAC1Q13547 482 aaPredicted RBP13.87□□□□□ -0.19
RFX1-204ENST00000588885 MTFR1Q15390 333 aa13.87□□□□□ -0.19
RFX1-204ENST00000588885 C12orf60Q5U649 245 aa13.87□□□□□ -0.19
RFX1-204ENST00000588885 CTR9Q6PD62 1173 aa13.87□□□□□ -0.19
RFX1-204ENST00000588885 AMOTL1Q8IY63 956 aa13.87□□□□□ -0.19
RFX1-204ENST00000588885 PI4K2BQ8TCG2 481 aa13.87□□□□□ -0.19
RFX1-204ENST00000588885 SIPA1L1O43166 1804 aa13.87□□□□□ -0.19
RFX1-204ENST00000588885 M0R2C6 588 aa13.86□□□□□ -0.19
RFX1-204ENST00000588885 GLRX3O76003 335 aaKnown RBP13.86□□□□□ -0.19
RFX1-204ENST00000588885 AKR1B1P15121 316 aa13.86□□□□□ -0.19
RFX1-204ENST00000588885 ELNP15502 786 aa13.86□□□□□ -0.19
RFX1-204ENST00000588885 CDK8P49336 464 aa13.86□□□□□ -0.19
RFX1-204ENST00000588885 HERVK_113P62684 666 aa13.86□□□□□ -0.19
RFX1-204ENST00000588885 FAM110CQ1W6H9 321 aa13.86□□□□□ -0.19
RFX1-204ENST00000588885 CENPQQ7L2Z9 268 aaPredicted RBP13.86□□□□□ -0.19
RFX1-204ENST00000588885 CLEC10AQ8IUN9 316 aa13.86□□□□□ -0.19
RFX1-204ENST00000588885 COA7Q96BR5 231 aa13.86□□□□□ -0.19
RFX1-204ENST00000588885 PAGR1Q9BTK6 254 aa13.86□□□□□ -0.19
RFX1-204ENST00000588885 FSD1Q9BTV5 496 aa13.86□□□□□ -0.19
RFX1-204ENST00000588885 TXNRD2Q9NNW7 524 aa13.86□□□□□ -0.19
RFX1-204ENST00000588885 TTC41PQ6P2S7 1318 aa13.86□□□□□ -0.19
RFX1-204ENST00000588885 MYH1P12882 1939 aa13.86□□□□□ -0.19
RFX1-204ENST00000588885 FOCADQ5VW36 1801 aa13.85□□□□□ -0.19
RFX1-204ENST00000588885 DOCK3Q8IZD9 2030 aa13.85□□□□□ -0.19
RFX1-204ENST00000588885 A0A1W2PRG0 241 aa13.85□□□□□ -0.19
RFX1-204ENST00000588885 GSG1L2A8MUP6 293 aa13.85□□□□□ -0.19
RFX1-204ENST00000588885 MINDY4BA8MYZ0 360 aa13.85□□□□□ -0.19
RFX1-204ENST00000588885 ADCY3O60266 1144 aa13.85□□□□□ -0.19
RFX1-204ENST00000588885 APPP05067 770 aa13.85□□□□□ -0.19
RFX1-204ENST00000588885 USP14P54578 494 aa13.85□□□□□ -0.19
RFX1-204ENST00000588885 POTEEQ6S8J3 1075 aa13.85□□□□□ -0.19
RFX1-204ENST00000588885 GPRC5AQ8NFJ5 357 aa13.85□□□□□ -0.19
RFX1-204ENST00000588885 APPBP2Q92624 585 aa13.85□□□□□ -0.19
RFX1-204ENST00000588885 GCC1Q96CN9 775 aa13.85□□□□□ -0.19
RFX1-204ENST00000588885 SEC62Q99442 399 aaKnown RBP13.85□□□□□ -0.19
RFX1-204ENST00000588885 KIAA1683Q9H0B3 1180 aa13.85□□□□□ -0.19
RFX1-204ENST00000588885 RWDD1Q9H446 243 aaPredicted RBP13.85□□□□□ -0.19
RFX1-204ENST00000588885 RBPJLQ9UBG7 517 aa13.85□□□□□ -0.19
RFX1-204ENST00000588885 SWAP70Q9UH65 585 aa13.85□□□□□ -0.19
RFX1-204ENST00000588885 USP17L15C9J2P7 530 aa13.84□□□□□ -0.19
RFX1-204ENST00000588885 USP17L13C9JLJ4 530 aa13.84□□□□□ -0.19
RFX1-204ENST00000588885 USP17L11C9JVI0 530 aa13.84□□□□□ -0.19
RFX1-204ENST00000588885 USP17L18D6R9N7 530 aa13.84□□□□□ -0.19
RFX1-204ENST00000588885 USP17L22D6RA61 530 aa13.84□□□□□ -0.19
RFX1-204ENST00000588885 USP17L17D6RBQ6 530 aa13.84□□□□□ -0.19
RFX1-204ENST00000588885 USP17L19D6RCP7 530 aa13.84□□□□□ -0.19
RFX1-204ENST00000588885 USP17L20D6RJB6 530 aa13.84□□□□□ -0.19
RFX1-204ENST00000588885 GPAA1O43292 621 aa13.84□□□□□ -0.19
RFX1-204ENST00000588885 ZFYP08048 801 aaPredicted RBP13.84□□□□□ -0.19
RFX1-204ENST00000588885 VCAM1P19320 739 aa13.84□□□□□ -0.19
RFX1-204ENST00000588885 ATP2B2Q01814 1243 aa13.84□□□□□ -0.19
RFX1-204ENST00000588885 USP17L24Q0WX57 530 aa13.84□□□□□ -0.19
RFX1-204ENST00000588885 Q3C1V9 767 aa13.84□□□□□ -0.19
RFX1-204ENST00000588885 LNPKQ9C0E8 428 aa13.84□□□□□ -0.19
RFX1-204ENST00000588885 CCL5P13501 91 aa13.83□□□□□ -0.2
RFX1-204ENST00000588885 KIAA1755Q5JYT7 1200 aa13.83□□□□□ -0.2
RFX1-204ENST00000588885 CATSPERGQ6ZRH7 1159 aa13.83□□□□□ -0.2
RFX1-204ENST00000588885 TMEM179Q6ZVK1 233 aa13.83□□□□□ -0.2
RFX1-204ENST00000588885 C16orf86Q6ZW13 317 aa13.83□□□□□ -0.2
RFX1-204ENST00000588885 SIAH1Q8IUQ4 282 aa13.83□□□□□ -0.2
RFX1-204ENST00000588885 CCAR1Q8IX12 1150 aaKnown RBP13.83□□□□□ -0.2
RFX1-204ENST00000588885 RNF208Q9H0X6 261 aa13.83□□□□□ -0.2
RFX1-204ENST00000588885 RPAP3Q9H6T3 665 aaPredicted RBP13.83□□□□□ -0.2
RFX1-204ENST00000588885 MORF4L1Q9UBU8 362 aa13.83□□□□□ -0.2
RFX1-204ENST00000588885 RAD21O60216 631 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms