RNA–Protein interactions for RNA: ENST00000588030.5

CIRBP-215, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CIRBP, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-215ENST00000588030 IFNL3Q8IZI9 196 aa23.66■■□□□ 1.38
CIRBP-215ENST00000588030 NACAP1Q9BZK3 213 aa23.66■■□□□ 1.38
CIRBP-215ENST00000588030 HELLSQ9NRZ9 838 aa23.66■■□□□ 1.38
CIRBP-215ENST00000588030 FMNL1O95466 1100 aaPredicted RBP23.65■■□□□ 1.38
CIRBP-215ENST00000588030 SDSP20132 328 aa23.65■■□□□ 1.38
CIRBP-215ENST00000588030 TTC22Q5TAA0 569 aa23.65■■□□□ 1.38
CIRBP-215ENST00000588030 GIMAP6Q6P9H5 292 aa23.65■■□□□ 1.38
CIRBP-215ENST00000588030 SMCR8Q8TEV9 937 aaPredicted RBP23.65■■□□□ 1.38
CIRBP-215ENST00000588030 EMILIN3Q9NT22 766 aa23.65■■□□□ 1.38
CIRBP-215ENST00000588030 SWAP70Q9UH65 585 aa23.65■■□□□ 1.38
CIRBP-215ENST00000588030 PNMA3Q9UL41 463 aa23.65■■□□□ 1.38
CIRBP-215ENST00000588030 ZSWIM8A7E2V4 1837 aa23.64■■□□□ 1.38
CIRBP-215ENST00000588030 OSBPP22059 807 aa23.64■■□□□ 1.38
CIRBP-215ENST00000588030 GUCY1A2P33402 732 aa23.64■■□□□ 1.38
CIRBP-215ENST00000588030 CDK8P49336 464 aa23.64■■□□□ 1.38
CIRBP-215ENST00000588030 MCMDC2Q4G0Z9 681 aa23.64■■□□□ 1.38
CIRBP-215ENST00000588030 CENPQQ7L2Z9 268 aaPredicted RBP23.64■■□□□ 1.38
CIRBP-215ENST00000588030 CCDC136Q96JN2 1154 aa23.64■■□□□ 1.38
CIRBP-215ENST00000588030 NAPBQ9H115 298 aa23.64■■□□□ 1.38
CIRBP-215ENST00000588030 ASCC2Q9H1I8 757 aaPredicted RBP23.64■■□□□ 1.38
CIRBP-215ENST00000588030 TMOD4Q9NZQ9 345 aa23.64■■□□□ 1.38
CIRBP-215ENST00000588030 SRRDQ9UH36 339 aa23.64■■□□□ 1.38
CIRBP-215ENST00000588030 GSPT1P15170 499 aaKnown RBP23.64■■□□□ 1.37
CIRBP-215ENST00000588030 HOXA7P31268 230 aaPredicted RBP23.64■■□□□ 1.37
CIRBP-215ENST00000588030 PRMT2P55345 433 aa23.64■■□□□ 1.37
CIRBP-215ENST00000588030 PABPC4Q13310 644 aaKnown RBP eCLIP23.64■■□□□ 1.373e-9■□□□□ 9.7
CIRBP-215ENST00000588030 VPS53Q5VIR6 699 aa23.64■■□□□ 1.37
CIRBP-215ENST00000588030 C16orf86Q6ZW13 317 aa23.64■■□□□ 1.37
CIRBP-215ENST00000588030 ANKRD13CQ8N6S4 541 aa23.64■■□□□ 1.37
CIRBP-215ENST00000588030 DIAPH3Q9NSV4 1193 aa23.64■■□□□ 1.37
CIRBP-215ENST00000588030 HOXD10P28358 340 aa23.63■■□□□ 1.37
CIRBP-215ENST00000588030 SEPT2Q15019 361 aa23.63■■□□□ 1.37
CIRBP-215ENST00000588030 ZYXQ15942 572 aaKnown RBP23.63■■□□□ 1.37
CIRBP-215ENST00000588030 SBK1Q52WX2 424 aa23.63■■□□□ 1.37
CIRBP-215ENST00000588030 CWC27Q6UX04 472 aaKnown RBP23.63■■□□□ 1.37
CIRBP-215ENST00000588030 AKR1B1P15121 316 aa23.62■■□□□ 1.37
CIRBP-215ENST00000588030 ZNF589Q86UQ0 364 aaPredicted RBP23.62■■□□□ 1.37
CIRBP-215ENST00000588030 SKAP1Q86WV1 359 aa23.62■■□□□ 1.37
CIRBP-215ENST00000588030 ACER1Q8TDN7 264 aa23.62■■□□□ 1.37
CIRBP-215ENST00000588030 FEZ1Q99689 392 aa23.62■■□□□ 1.37
CIRBP-215ENST00000588030 MYH8P13535 1937 aa23.61■■□□□ 1.37
CIRBP-215ENST00000588030 FCGRTP55899 365 aa23.61■■□□□ 1.37
CIRBP-215ENST00000588030 SLC9C1Q4G0N8 1177 aa23.61■■□□□ 1.37
CIRBP-215ENST00000588030 USP17L2Q6R6M4 530 aa23.61■■□□□ 1.37
CIRBP-215ENST00000588030 ZNF333Q96JL9 665 aa23.61■■□□□ 1.37
CIRBP-215ENST00000588030 P2RX7Q99572 595 aaKnown RBP23.61■■□□□ 1.37
CIRBP-215ENST00000588030 CENPFP49454 3210 aa23.61■■□□□ 1.37
CIRBP-215ENST00000588030 GCLCP48506 637 aaPredicted RBP23.6■■□□□ 1.37
CIRBP-215ENST00000588030 TICAM2Q86XR7 235 aa23.6■■□□□ 1.37
CIRBP-215ENST00000588030 MKNK2Q9HBH9 465 aa23.6■■□□□ 1.37
CIRBP-215ENST00000588030 GABRQQ9UN88 632 aa23.6■■□□□ 1.37
CIRBP-215ENST00000588030 POTEFA5A3E0 1075 aa23.59■■□□□ 1.37
CIRBP-215ENST00000588030 FOXP2O15409 715 aa23.59■■□□□ 1.37
CIRBP-215ENST00000588030 FAM110CQ1W6H9 321 aa23.59■■□□□ 1.37
CIRBP-215ENST00000588030 NBPF11Q86T75 865 aa23.59■■□□□ 1.37
CIRBP-215ENST00000588030 SH3TC2Q8TF17 1288 aa23.59■■□□□ 1.37
CIRBP-215ENST00000588030 TAOK2Q9UL54 1235 aa23.59■■□□□ 1.37
CIRBP-215ENST00000588030 LOC285556D6RIA3 1793 aa23.59■■□□□ 1.37
CIRBP-215ENST00000588030 CCDC171Q6TFL3 1326 aa23.59■■□□□ 1.37
CIRBP-215ENST00000588030 PRDM1O75626 825 aa23.59■■□□□ 1.37
CIRBP-215ENST00000588030 PRKCZQ05513 592 aa23.59■■□□□ 1.37
CIRBP-215ENST00000588030 TMEM179Q6ZVK1 233 aa23.59■■□□□ 1.37
CIRBP-215ENST00000588030 CLEC10AQ8IUN9 316 aa23.59■■□□□ 1.37
CIRBP-215ENST00000588030 C12orf42Q96LP6 360 aa23.59■■□□□ 1.37
CIRBP-215ENST00000588030 KIAA1683Q9H0B3 1180 aa23.59■■□□□ 1.37
CIRBP-215ENST00000588030 MYPNQ86TC9 1320 aa23.58■■□□□ 1.37
CIRBP-215ENST00000588030 HIP1O00291 1037 aa23.58■■□□□ 1.36
CIRBP-215ENST00000588030 IRX3P78415 501 aaPredicted RBP23.58■■□□□ 1.36
CIRBP-215ENST00000588030 PPARAQ07869 468 aa23.58■■□□□ 1.36
CIRBP-215ENST00000588030 A0A1W2PRG0 241 aa23.57■■□□□ 1.36
CIRBP-215ENST00000588030 PEX10O60683 326 aa23.57■■□□□ 1.36
CIRBP-215ENST00000588030 HSPD1P10809 573 aaKnown RBP23.57■■□□□ 1.36
CIRBP-215ENST00000588030 POTEEQ6S8J3 1075 aa23.57■■□□□ 1.36
CIRBP-215ENST00000588030 RAET1EQ8TD07 263 aa23.57■■□□□ 1.36
CIRBP-215ENST00000588030 CCDC17Q96LX7 622 aa23.57■■□□□ 1.36
CIRBP-215ENST00000588030 USP14P54578 494 aa23.56■■□□□ 1.36
CIRBP-215ENST00000588030 HERVK_113P62684 666 aa23.56■■□□□ 1.36
CIRBP-215ENST00000588030 SIAH1Q8IUQ4 282 aa23.56■■□□□ 1.36
CIRBP-215ENST00000588030 MORF4L1Q9UBU8 362 aa23.56■■□□□ 1.36
CIRBP-215ENST00000588030 ROBO3Q96MS0 1386 aa23.56■■□□□ 1.36
CIRBP-215ENST00000588030 KIAA0100Q14667 2235 aaKnown RBP23.56■■□□□ 1.36
CIRBP-215ENST00000588030 TNPO2O14787 897 aaKnown RBP23.55■■□□□ 1.36
CIRBP-215ENST00000588030 SLC3A2P08195 630 aaKnown RBP23.55■■□□□ 1.36
CIRBP-215ENST00000588030 RASA1P20936 1047 aa23.55■■□□□ 1.36
CIRBP-215ENST00000588030 FLT3LGP49771 235 aa23.55■■□□□ 1.36
CIRBP-215ENST00000588030 MFAP1P55081 439 aaKnown RBP23.55■■□□□ 1.36
CIRBP-215ENST00000588030 ATP2B2Q01814 1243 aa23.55■■□□□ 1.36
CIRBP-215ENST00000588030 ICA1Q05084 483 aa23.55■■□□□ 1.36
CIRBP-215ENST00000588030 CTDSPL2Q05D32 466 aa23.55■■□□□ 1.36
CIRBP-215ENST00000588030 TXNRD2Q9NNW7 524 aa23.55■■□□□ 1.36
CIRBP-215ENST00000588030 RBPJLQ9UBG7 517 aa23.55■■□□□ 1.36
CIRBP-215ENST00000588030 MYCP01106 439 aaPredicted RBP23.54■■□□□ 1.36
CIRBP-215ENST00000588030 GRK4P32298 578 aa23.54■■□□□ 1.36
CIRBP-215ENST00000588030 ZNF287Q9HBT7 754 aa23.54■■□□□ 1.36
CIRBP-215ENST00000588030 USP17L15C9J2P7 530 aa23.54■■□□□ 1.36
CIRBP-215ENST00000588030 USP17L13C9JLJ4 530 aa23.54■■□□□ 1.36
CIRBP-215ENST00000588030 USP17L11C9JVI0 530 aa23.54■■□□□ 1.36
CIRBP-215ENST00000588030 USP17L18D6R9N7 530 aa23.54■■□□□ 1.36
CIRBP-215ENST00000588030 USP17L22D6RA61 530 aa23.54■■□□□ 1.36
CIRBP-215ENST00000588030 USP17L17D6RBQ6 530 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms