RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 SIPA1L1O43166 1804 aa10.53□□□□□ -0.72
SDF2-204ENST00000587338 NCOR1O75376 2440 aa10.53□□□□□ -0.72
SDF2-204ENST00000587338 CNMDO75829 334 aa10.52□□□□□ -0.73
SDF2-204ENST00000587338 PTPREP23469 700 aa10.52□□□□□ -0.73
SDF2-204ENST00000587338 ANO1Q5XXA6 986 aa10.52□□□□□ -0.73
SDF2-204ENST00000587338 SLC39A5Q6ZMH5 540 aa10.52□□□□□ -0.73
SDF2-204ENST00000587338 TRPV1Q8NER1 839 aa10.52□□□□□ -0.73
SDF2-204ENST00000587338 NPLOC4Q8TAT6 608 aa10.52□□□□□ -0.73
SDF2-204ENST00000587338 TGFBRAP1Q8WUH2 860 aa10.52□□□□□ -0.73
SDF2-204ENST00000587338 PDLIM7Q9NR12 457 aa10.52□□□□□ -0.73
SDF2-204ENST00000587338 SMC4Q9NTJ3 1288 aa10.52□□□□□ -0.73
SDF2-204ENST00000587338 SAP30BPQ9UHR5 308 aaKnown RBP10.52□□□□□ -0.73
SDF2-204ENST00000587338 PALD1Q9ULE6 856 aa10.52□□□□□ -0.73
SDF2-204ENST00000587338 FLT1P17948 1338 aa10.52□□□□□ -0.73
SDF2-204ENST00000587338 CHD9Q3L8U1 2897 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 USP17L15C9J2P7 530 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 USP17L13C9JLJ4 530 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 USP17L11C9JVI0 530 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 USP17L18D6R9N7 530 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 USP17L22D6RA61 530 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 USP17L17D6RBQ6 530 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 USP17L19D6RCP7 530 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 USP17L20D6RJB6 530 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 TNFRSF10AO00220 468 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 BAG3O95817 575 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 GH2P01242 217 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 HOXC6P09630 235 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 CYBAP13498 195 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 PLCG2P16885 1265 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 USP17L24Q0WX57 530 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 GRB14Q14449 540 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 TJAP1Q5JTD0 557 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 NAA16Q6N069 864 aaPredicted RBP10.51□□□□□ -0.73
SDF2-204ENST00000587338 SH3RF1Q7Z6J0 888 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 FOXP4Q8IVH2 680 aaPredicted RBP10.51□□□□□ -0.73
SDF2-204ENST00000587338 USP38Q8NB14 1042 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 ARRDC4Q8NCT1 418 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 RNPC3Q96LT9 517 aaKnown RBP10.51□□□□□ -0.73
SDF2-204ENST00000587338 GINM1Q9NU53 330 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 RAPGEFL1Q9UHV5 662 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 HDAC5Q9UQL6 1122 aa10.51□□□□□ -0.73
SDF2-204ENST00000587338 TMEM265A0A087WTH1 108 aa10.5□□□□□ -0.73
SDF2-204ENST00000587338 TRIM43BA6NCK2 446 aa10.5□□□□□ -0.73
SDF2-204ENST00000587338 SRGAP3O43295 1099 aa10.5□□□□□ -0.73
SDF2-204ENST00000587338 HLA-DOAP06340 250 aa10.5□□□□□ -0.73
SDF2-204ENST00000587338 ARID4AP29374 1257 aaPredicted RBP10.5□□□□□ -0.73
SDF2-204ENST00000587338 MCAMP43121 646 aa10.5□□□□□ -0.73
SDF2-204ENST00000587338 ATF7IPQ6VMQ6 1270 aa10.5□□□□□ -0.73
SDF2-204ENST00000587338 FERMT2Q96AC1 680 aa10.5□□□□□ -0.73
SDF2-204ENST00000587338 TRIM43Q96BQ3 446 aaPredicted RBP10.5□□□□□ -0.73
SDF2-204ENST00000587338 C12orf42Q96LP6 360 aa10.5□□□□□ -0.73
SDF2-204ENST00000587338 BTBD7Q9P203 1132 aa10.5□□□□□ -0.73
SDF2-204ENST00000587338 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.5□□□□□ -0.73
SDF2-204ENST00000587338 ZNF521Q96K83 1311 aa10.5□□□□□ -0.73
SDF2-204ENST00000587338 RLFQ13129 1914 aa10.5□□□□□ -0.73
SDF2-204ENST00000587338 VCAM1P19320 739 aa10.49□□□□□ -0.73
SDF2-204ENST00000587338 ADCYAP1R1P41586 468 aa10.49□□□□□ -0.73
SDF2-204ENST00000587338 GRIN2CQ14957 1233 aa10.49□□□□□ -0.73
SDF2-204ENST00000587338 SNX17Q15036 470 aa10.49□□□□□ -0.73
SDF2-204ENST00000587338 RAB3GAP1Q15042 981 aa10.49□□□□□ -0.73
SDF2-204ENST00000587338 CATSPERGQ6ZRH7 1159 aa10.49□□□□□ -0.73
SDF2-204ENST00000587338 ADGRA1Q86SQ6 560 aa10.49□□□□□ -0.73
SDF2-204ENST00000587338 DPP9Q86TI2 863 aa10.49□□□□□ -0.73
SDF2-204ENST00000587338 METTL16Q86W50 562 aaKnown RBP10.49□□□□□ -0.73
SDF2-204ENST00000587338 MEIS3Q99687 375 aa10.49□□□□□ -0.73
SDF2-204ENST00000587338 SNRKQ9NRH2 765 aa10.49□□□□□ -0.73
SDF2-204ENST00000587338 SPDYE16A6NNV3 312 aaPredicted RBP10.48□□□□□ -0.73
SDF2-204ENST00000587338 SEPT4O43236 478 aa10.48□□□□□ -0.73
SDF2-204ENST00000587338 UQCRFS1P1P0C7P4 283 aa10.48□□□□□ -0.73
SDF2-204ENST00000587338 DNAJB2P25686 324 aa10.48□□□□□ -0.73
SDF2-204ENST00000587338 ADORA2AP29274 412 aa10.48□□□□□ -0.73
SDF2-204ENST00000587338 USP14P54578 494 aa10.48□□□□□ -0.73
SDF2-204ENST00000587338 EPHB4P54760 987 aa10.48□□□□□ -0.73
SDF2-204ENST00000587338 TLE2Q04725 743 aa10.48□□□□□ -0.73
SDF2-204ENST00000587338 ALDH1L2Q3SY69 923 aa10.48□□□□□ -0.73
SDF2-204ENST00000587338 FAM47AQ5JRC9 791 aa10.48□□□□□ -0.73
SDF2-204ENST00000587338 ZBED9Q6R2W3 1325 aa10.48□□□□□ -0.73
SDF2-204ENST00000587338 CHD7Q9P2D1 2997 aa10.47□□□□□ -0.73
SDF2-204ENST00000587338 E9PSI1 815 aa10.47□□□□□ -0.73
SDF2-204ENST00000587338 CLTBP09497 229 aa10.47□□□□□ -0.73
SDF2-204ENST00000587338 ITGB8P26012 769 aa10.47□□□□□ -0.73
SDF2-204ENST00000587338 PPP4CP60510 307 aa10.47□□□□□ -0.73
SDF2-204ENST00000587338 LRRC41Q15345 812 aa10.47□□□□□ -0.73
SDF2-204ENST00000587338 OLFML2BQ68BL8 750 aa10.47□□□□□ -0.73
SDF2-204ENST00000587338 LBX2Q6XYB7 198 aa10.47□□□□□ -0.73
SDF2-204ENST00000587338 ACER1Q8TDN7 264 aa10.47□□□□□ -0.73
SDF2-204ENST00000587338 PPM1EQ8WY54 764 aa10.47□□□□□ -0.73
SDF2-204ENST00000587338 KIAA1683Q9H0B3 1180 aa10.47□□□□□ -0.73
SDF2-204ENST00000587338 RPAP3Q9H6T3 665 aaPredicted RBP10.47□□□□□ -0.73
SDF2-204ENST00000587338 NOB1Q9ULX3 412 aaKnown RBP10.47□□□□□ -0.73
SDF2-204ENST00000587338 CDK5RAP2Q96SN8 1893 aa10.47□□□□□ -0.73
SDF2-204ENST00000587338 PQBP1O60828 265 aaKnown RBP10.46□□□□□ -0.73
SDF2-204ENST00000587338 IGHA2P01877 340 aa10.46□□□□□ -0.73
SDF2-204ENST00000587338 RAG1P15918 1043 aa10.46□□□□□ -0.73
SDF2-204ENST00000587338 DYNLL1P63167 89 aaKnown RBP10.46□□□□□ -0.73
SDF2-204ENST00000587338 FPGSQ05932 587 aa10.46□□□□□ -0.73
SDF2-204ENST00000587338 C1QBPQ07021 282 aaKnown RBP10.46□□□□□ -0.73
SDF2-204ENST00000587338 ABCB5Q2M3G0 1257 aa10.46□□□□□ -0.73
SDF2-204ENST00000587338 TTC39AQ5SRH9 613 aa10.46□□□□□ -0.73
SDF2-204ENST00000587338 PRAMEF19Q5SWL8 479 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms