RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 NEDD1Q8NHV4 660 aa17.52■□□□□ 0.4
NFIX-208ENST00000587260 CCDC17Q96LX7 622 aa17.52■□□□□ 0.4
NFIX-208ENST00000587260 CABP5Q9NP86 173 aa17.52■□□□□ 0.4
NFIX-208ENST00000587260 SH2B1Q9NRF2 756 aaPredicted RBP17.52■□□□□ 0.4
NFIX-208ENST00000587260 DAXXQ9UER7 740 aaPredicted RBP17.52■□□□□ 0.4
NFIX-208ENST00000587260 PHIPQ8WWQ0 1821 aa17.52■□□□□ 0.4
NFIX-208ENST00000587260 SH2B2O14492 632 aaPredicted RBP17.52■□□□□ 0.39
NFIX-208ENST00000587260 IFIT3O14879 490 aaKnown RBP17.52■□□□□ 0.39
NFIX-208ENST00000587260 FGD1P98174 961 aa17.52■□□□□ 0.39
NFIX-208ENST00000587260 CUL4AQ13619 759 aa17.52■□□□□ 0.39
NFIX-208ENST00000587260 SEPT2Q15019 361 aa17.52■□□□□ 0.39
NFIX-208ENST00000587260 SART3Q15020 963 aaKnown RBP17.52■□□□□ 0.39
NFIX-208ENST00000587260 TMEM179Q6ZVK1 233 aa17.52■□□□□ 0.39
NFIX-208ENST00000587260 NOL8Q76FK4 1167 aaKnown RBP17.52■□□□□ 0.39
NFIX-208ENST00000587260 RBM46Q8TBY0 533 aaKnown RBP17.52■□□□□ 0.39
NFIX-208ENST00000587260 BRF1Q92994 677 aa17.52■□□□□ 0.39
NFIX-208ENST00000587260 CEP95Q96GE4 821 aa17.52■□□□□ 0.39
NFIX-208ENST00000587260 ZSCAN10Q96SZ4 725 aaPredicted RBP17.52■□□□□ 0.39
NFIX-208ENST00000587260 IL17RBQ9NRM6 502 aa17.52■□□□□ 0.39
NFIX-208ENST00000587260 TCP11L1Q9NUJ3 509 aa17.52■□□□□ 0.39
NFIX-208ENST00000587260 ZNF112Q9UJU3 913 aa17.52■□□□□ 0.39
NFIX-208ENST00000587260 TPCN1Q9ULQ1 816 aa17.52■□□□□ 0.39
NFIX-208ENST00000587260 GUCY1A2P33402 732 aa17.51■□□□□ 0.39
NFIX-208ENST00000587260 VGLL4Q14135 290 aa17.51■□□□□ 0.39
NFIX-208ENST00000587260 TMEM67Q5HYA8 995 aa17.51■□□□□ 0.39
NFIX-208ENST00000587260 ARMC9Q7Z3E5 817 aa17.51■□□□□ 0.39
NFIX-208ENST00000587260 SGMS1Q86VZ5 419 aa17.51■□□□□ 0.39
NFIX-208ENST00000587260 SCYL3Q8IZE3 742 aa17.51■□□□□ 0.39
NFIX-208ENST00000587260 TMTC2Q8N394 836 aa17.51■□□□□ 0.39
NFIX-208ENST00000587260 GBA2Q9HCG7 927 aaPredicted RBP17.51■□□□□ 0.39
NFIX-208ENST00000587260 STX8Q9UNK0 236 aa17.51■□□□□ 0.39
NFIX-208ENST00000587260 PASKQ96RG2 1323 aa17.51■□□□□ 0.39
NFIX-208ENST00000587260 ERICH2A1L162 156 aa17.5■□□□□ 0.39
NFIX-208ENST00000587260 CTNND1O60716 968 aaKnown RBP17.5■□□□□ 0.39
NFIX-208ENST00000587260 SLC4A3P48751 1232 aa17.5■□□□□ 0.39
NFIX-208ENST00000587260 ATP2B2Q01814 1243 aa17.5■□□□□ 0.39
NFIX-208ENST00000587260 ICA1Q05084 483 aa17.5■□□□□ 0.39
NFIX-208ENST00000587260 SEC23AQ15436 765 aa17.5■□□□□ 0.39
NFIX-208ENST00000587260 ME3Q16798 604 aa17.5■□□□□ 0.39
NFIX-208ENST00000587260 CCDC178Q5BJE1 867 aa17.5■□□□□ 0.39
NFIX-208ENST00000587260 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.5■□□□□ 0.39
NFIX-208ENST00000587260 ENAHQ8N8S7 591 aaPredicted RBP17.5■□□□□ 0.39
NFIX-208ENST00000587260 ZNF274Q96GC6 653 aaPredicted RBP17.5■□□□□ 0.39
NFIX-208ENST00000587260 LARP6Q9BRS8 491 aaKnown RBP17.5■□□□□ 0.39
NFIX-208ENST00000587260 LY9Q9HBG7 655 aa17.5■□□□□ 0.39
NFIX-208ENST00000587260 SENP2Q9HC62 589 aa17.5■□□□□ 0.39
NFIX-208ENST00000587260 IGKV6D-41A0A0C4DH26 115 aa17.49■□□□□ 0.39
NFIX-208ENST00000587260 UBE2Q2LH0YL09 131 aa17.49■□□□□ 0.39
NFIX-208ENST00000587260 ASNSP08243 561 aa17.49■□□□□ 0.39
NFIX-208ENST00000587260 WTAPQ15007 396 aa17.49■□□□□ 0.39
NFIX-208ENST00000587260 CST9Q5W186 159 aa17.49■□□□□ 0.39
NFIX-208ENST00000587260 ANKS1AQ92625 1134 aa17.49■□□□□ 0.39
NFIX-208ENST00000587260 INTS4Q96HW7 963 aaKnown RBP17.49■□□□□ 0.39
NFIX-208ENST00000587260 CLMNQ96JQ2 1002 aa17.49■□□□□ 0.39
NFIX-208ENST00000587260 PICK1Q9NRD5 415 aa17.49■□□□□ 0.39
NFIX-208ENST00000587260 CSADQ9Y600 493 aa17.49■□□□□ 0.39
NFIX-208ENST00000587260 SNCAIPQ9Y6H5 919 aa17.49■□□□□ 0.39
NFIX-208ENST00000587260 MAP3K9P80192 1104 aa17.48■□□□□ 0.39
NFIX-208ENST00000587260 MAP3K11Q16584 847 aa17.48■□□□□ 0.39
NFIX-208ENST00000587260 NOL9Q5SY16 702 aaKnown RBP17.48■□□□□ 0.39
NFIX-208ENST00000587260 IFIT1BQ5T764 474 aaKnown RBP17.48■□□□□ 0.39
NFIX-208ENST00000587260 ANKRD13AQ8IZ07 590 aa17.48■□□□□ 0.39
NFIX-208ENST00000587260 LRRC47Q8N1G4 583 aaKnown RBP17.48■□□□□ 0.39
NFIX-208ENST00000587260 C2orf69Q8N8R5 385 aa17.48■□□□□ 0.39
NFIX-208ENST00000587260 ELP3Q9H9T3 547 aa17.48■□□□□ 0.39
NFIX-208ENST00000587260 MTMR4Q9NYA4 1195 aa17.48■□□□□ 0.39
NFIX-208ENST00000587260 NOVP48745 357 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 APOBRQ0VD83 1088 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 RCSD1Q6JBY9 416 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 NFXL1Q6ZNB6 911 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 DGKHQ86XP1 1220 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 KANSL2Q9H9L4 492 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 BRPF3Q9ULD4 1205 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 PFKFB2O60825 505 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 LARGE1O95461 756 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 TTLL1O95922 423 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 EEF2P13639 858 aaKnown RBP17.47■□□□□ 0.39
NFIX-208ENST00000587260 PTPRAP18433 802 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 PDIA3P30101 505 aaKnown RBP17.47■□□□□ 0.39
NFIX-208ENST00000587260 RCAN1P53805 252 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 FKBP1BP68106 108 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 RAB11FIP4Q86YS3 637 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 CHMP4CQ96CF2 233 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 CLIP2Q9UDT6 1046 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 NAP1L2Q9ULW6 460 aaPredicted RBP17.47■□□□□ 0.39
NFIX-208ENST00000587260 MTMR7Q9Y216 660 aa17.47■□□□□ 0.39
NFIX-208ENST00000587260 PTPRFP10586 1907 aa17.46■□□□□ 0.39
NFIX-208ENST00000587260 ECE1P42892 770 aa17.46■□□□□ 0.39
NFIX-208ENST00000587260 C1QTNF8P60827 252 aa17.46■□□□□ 0.39
NFIX-208ENST00000587260 FSTL1Q12841 308 aa17.46■□□□□ 0.39
NFIX-208ENST00000587260 CNKSR2Q8WXI2 1034 aa17.46■□□□□ 0.39
NFIX-208ENST00000587260 TMEM47Q9BQJ4 181 aa17.46■□□□□ 0.39
NFIX-208ENST00000587260 MYL10Q9BUA6 226 aa17.46■□□□□ 0.39
NFIX-208ENST00000587260 KAT14Q9H8E8 782 aa17.46■□□□□ 0.39
NFIX-208ENST00000587260 KLF18A0A0U1RQI7 1052 aa17.45■□□□□ 0.38
NFIX-208ENST00000587260 CCDC69A6NI79 296 aa17.45■□□□□ 0.38
NFIX-208ENST00000587260 USP17L5A8MUK1 530 aa17.45■□□□□ 0.38
NFIX-208ENST00000587260 RAD21O60216 631 aa17.45■□□□□ 0.38
NFIX-208ENST00000587260 ZYXQ15942 572 aaKnown RBP17.45■□□□□ 0.38
NFIX-208ENST00000587260 LDLRAD1Q5T700 205 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms