RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 USP50Q70EL3 339 aaPredicted RBP23.83■■□□□ 1.41
ATG4D-204ENST00000586417 AMOTL1Q8IY63 956 aa23.83■■□□□ 1.41
ATG4D-204ENST00000586417 CCDC144CPQ8IYA2 1237 aa23.83■■□□□ 1.41
ATG4D-204ENST00000586417 ZNF654Q8IZM8 581 aa23.83■■□□□ 1.41
ATG4D-204ENST00000586417 NMRK2Q9NPI5 230 aa23.83■■□□□ 1.41
ATG4D-204ENST00000586417 ORC3Q9UBD5 711 aaPredicted RBP23.83■■□□□ 1.41
ATG4D-204ENST00000586417 SIPA1L1O43166 1804 aa23.83■■□□□ 1.4
ATG4D-204ENST00000586417 H3BQV1 296 aa23.83■■□□□ 1.4
ATG4D-204ENST00000586417 DNM1Q05193 864 aaKnown RBP23.83■■□□□ 1.4
ATG4D-204ENST00000586417 EAPPQ56P03 285 aaPredicted RBP23.83■■□□□ 1.4
ATG4D-204ENST00000586417 FAM47AQ5JRC9 791 aa23.83■■□□□ 1.4
ATG4D-204ENST00000586417 IFFO2Q5TF58 517 aa23.83■■□□□ 1.4
ATG4D-204ENST00000586417 SYNE3Q6ZMZ3 975 aa23.83■■□□□ 1.4
ATG4D-204ENST00000586417 FAM151AQ8WW52 585 aa23.83■■□□□ 1.4
ATG4D-204ENST00000586417 GDPD2Q9HCC8 539 aa23.83■■□□□ 1.4
ATG4D-204ENST00000586417 POTEIP0CG38 1075 aa23.82■■□□□ 1.4
ATG4D-204ENST00000586417 POTEJP0CG39 1038 aa23.82■■□□□ 1.4
ATG4D-204ENST00000586417 RASA3Q14644 834 aa23.82■■□□□ 1.4
ATG4D-204ENST00000586417 ZSCAN29Q8IWY8 852 aaPredicted RBP23.82■■□□□ 1.4
ATG4D-204ENST00000586417 DDX49Q9Y6V7 483 aaKnown RBP23.82■■□□□ 1.4
ATG4D-204ENST00000586417 CDKL5O76039 1030 aa23.81■■□□□ 1.4
ATG4D-204ENST00000586417 USP48Q86UV5 1035 aa23.81■■□□□ 1.4
ATG4D-204ENST00000586417 FAM83AQ86UY5 434 aa23.81■■□□□ 1.4
ATG4D-204ENST00000586417 VEGFAP15692 232 aaPredicted RBP23.8■■□□□ 1.4
ATG4D-204ENST00000586417 GPT2Q8TD30 523 aa23.8■■□□□ 1.4
ATG4D-204ENST00000586417 DEFB129Q9H1M3 183 aa23.8■■□□□ 1.4
ATG4D-204ENST00000586417 PGAP2Q9UHJ9 254 aa23.8■■□□□ 1.4
ATG4D-204ENST00000586417 ATRNL1Q5VV63 1379 aa23.8■■□□□ 1.4
ATG4D-204ENST00000586417 NMT2O60551 498 aa23.8■■□□□ 1.4
ATG4D-204ENST00000586417 FOSBP53539 338 aa23.8■■□□□ 1.4
ATG4D-204ENST00000586417 RTN1Q16799 776 aa23.8■■□□□ 1.4
ATG4D-204ENST00000586417 IFIT1BQ5T764 474 aaKnown RBP23.8■■□□□ 1.4
ATG4D-204ENST00000586417 FAM173BQ6P4H8 233 aa23.8■■□□□ 1.4
ATG4D-204ENST00000586417 CPLX2Q6PUV4 134 aaKnown RBP23.8■■□□□ 1.4
ATG4D-204ENST00000586417 DLK2Q6UY11 383 aa23.8■■□□□ 1.4
ATG4D-204ENST00000586417 C16orf86Q6ZW13 317 aa23.8■■□□□ 1.4
ATG4D-204ENST00000586417 SLC44A5Q8NCS7 719 aa23.8■■□□□ 1.4
ATG4D-204ENST00000586417 TSPY2A6NKD2 308 aa23.79■■□□□ 1.4
ATG4D-204ENST00000586417 PRAMEF18Q5VWM3 479 aa23.79■■□□□ 1.4
ATG4D-204ENST00000586417 TEPSINQ96N21 525 aa23.79■■□□□ 1.4
ATG4D-204ENST00000586417 GZF1Q9H116 711 aaPredicted RBP23.79■■□□□ 1.4
ATG4D-204ENST00000586417 STK36Q9NRP7 1315 aa23.78■■□□□ 1.4
ATG4D-204ENST00000586417 FAM196BA6NMK8 535 aa23.78■■□□□ 1.4
ATG4D-204ENST00000586417 IFNAR1P17181 557 aa23.78■■□□□ 1.4
ATG4D-204ENST00000586417 TNNI2P48788 182 aa23.78■■□□□ 1.4
ATG4D-204ENST00000586417 TNFAIP1Q13829 316 aa23.78■■□□□ 1.4
ATG4D-204ENST00000586417 RCSD1Q6JBY9 416 aa23.78■■□□□ 1.4
ATG4D-204ENST00000586417 TTC6Q86TZ1 520 aa23.78■■□□□ 1.4
ATG4D-204ENST00000586417 APOBEC3FQ8IUX4 373 aaKnown RBP23.78■■□□□ 1.4
ATG4D-204ENST00000586417 FANCBQ8NB91 859 aa23.78■■□□□ 1.4
ATG4D-204ENST00000586417 PHKBQ93100 1093 aa23.78■■□□□ 1.4
ATG4D-204ENST00000586417 CSRNP1Q96S65 589 aa23.78■■□□□ 1.4
ATG4D-204ENST00000586417 DHX36Q9H2U1 1008 aaKnown RBP23.78■■□□□ 1.4
ATG4D-204ENST00000586417 ZSCAN16Q9H4T2 348 aaPredicted RBP23.78■■□□□ 1.4
ATG4D-204ENST00000586417 RASA1P20936 1047 aa23.78■■□□□ 1.4
ATG4D-204ENST00000586417 TFAP4Q01664 338 aa23.78■■□□□ 1.4
ATG4D-204ENST00000586417 PNMA8AQ86V59 439 aaPredicted RBP23.78■■□□□ 1.4
ATG4D-204ENST00000586417 RGS22Q8NE09 1264 aa23.78■■□□□ 1.4
ATG4D-204ENST00000586417 MKNK2Q9HBH9 465 aa23.78■■□□□ 1.4
ATG4D-204ENST00000586417 COL2A1P02458 1487 aaPredicted RBP23.77■■□□□ 1.4
ATG4D-204ENST00000586417 PITPNM2Q9BZ72 1349 aa23.77■■□□□ 1.4
ATG4D-204ENST00000586417 GUCY1B3Q02153 619 aa23.77■■□□□ 1.4
ATG4D-204ENST00000586417 TROAPQ12815 778 aa23.77■■□□□ 1.4
ATG4D-204ENST00000586417 FBXO18Q8NFZ0 1043 aa23.77■■□□□ 1.4
ATG4D-204ENST00000586417 DCPSQ96C86 337 aaKnown RBP23.77■■□□□ 1.4
ATG4D-204ENST00000586417 C8orf76Q96K31 380 aa23.77■■□□□ 1.4
ATG4D-204ENST00000586417 IL17RBQ9NRM6 502 aa23.77■■□□□ 1.4
ATG4D-204ENST00000586417 PI4KBQ9UBF8 816 aa23.77■■□□□ 1.4
ATG4D-204ENST00000586417 FIBPO43427 364 aa23.76■■□□□ 1.39
ATG4D-204ENST00000586417 GADD45BO75293 160 aaPredicted RBP23.76■■□□□ 1.39
ATG4D-204ENST00000586417 NCLP19338 710 aaKnown RBP23.76■■□□□ 1.39
ATG4D-204ENST00000586417 CDK8P49336 464 aa23.76■■□□□ 1.39
ATG4D-204ENST00000586417 GABPAQ06546 454 aa23.76■■□□□ 1.39
ATG4D-204ENST00000586417 CATIPQ7Z7H3 387 aa23.76■■□□□ 1.39
ATG4D-204ENST00000586417 NUP133Q8WUM0 1156 aa23.76■■□□□ 1.39
ATG4D-204ENST00000586417 DNAJC18Q9H819 358 aa23.76■■□□□ 1.39
ATG4D-204ENST00000586417 MYH15Q9Y2K3 1946 aa23.76■■□□□ 1.39
ATG4D-204ENST00000586417 CCDC196A0A1B0GTZ2 297 aa23.75■■□□□ 1.39
ATG4D-204ENST00000586417 ADM5C9JUS6 153 aa23.75■■□□□ 1.39
ATG4D-204ENST00000586417 FMNL1O95466 1100 aaPredicted RBP23.75■■□□□ 1.39
ATG4D-204ENST00000586417 HLA-DOAP06340 250 aa23.75■■□□□ 1.39
ATG4D-204ENST00000586417 KRT85P78386 507 aa23.75■■□□□ 1.39
ATG4D-204ENST00000586417 PPP2R5BQ15173 497 aa23.75■■□□□ 1.39
ATG4D-204ENST00000586417 OTUD7BQ6GQQ9 843 aa23.75■■□□□ 1.39
ATG4D-204ENST00000586417 NBPF11Q86T75 865 aa23.75■■□□□ 1.39
ATG4D-204ENST00000586417 ZC3H15Q8WU90 426 aaKnown RBP23.75■■□□□ 1.39
ATG4D-204ENST00000586417 TCP11L1Q9NUJ3 509 aa23.75■■□□□ 1.39
ATG4D-204ENST00000586417 SERPINB13Q9UIV8 391 aa23.75■■□□□ 1.39
ATG4D-204ENST00000586417 DDAH1O94760 285 aa23.75■■□□□ 1.39
ATG4D-204ENST00000586417 ANKS1AQ92625 1134 aa23.75■■□□□ 1.39
ATG4D-204ENST00000586417 AIFM3Q96NN9 605 aa23.75■■□□□ 1.39
ATG4D-204ENST00000586417 ZNF287Q9HBT7 754 aa23.75■■□□□ 1.39
ATG4D-204ENST00000586417 GJB4Q9NTQ9 266 aa23.75■■□□□ 1.39
ATG4D-204ENST00000586417 CLEC11AQ9Y240 323 aa23.75■■□□□ 1.39
ATG4D-204ENST00000586417 MBD3O95983 291 aa23.74■■□□□ 1.39
ATG4D-204ENST00000586417 NBPF12Q5TAG4 269 aaPredicted RBP23.74■■□□□ 1.39
ATG4D-204ENST00000586417 KRT26Q7Z3Y9 468 aa23.74■■□□□ 1.39
ATG4D-204ENST00000586417 DGKHQ86XP1 1220 aa23.74■■□□□ 1.39
ATG4D-204ENST00000586417 ZNF444Q8N0Y2 327 aaPredicted RBP23.74■■□□□ 1.39
ATG4D-204ENST00000586417 ALG1Q9BT22 464 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms