RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 ACER1Q8TDN7 264 aa25.91■■□□□ 1.74
R3HDM4-202ENST00000586080 FAM227BQ96M60 508 aa25.91■■□□□ 1.74
R3HDM4-202ENST00000586080 ARHGAP39Q9C0H5 1083 aa25.91■■□□□ 1.74
R3HDM4-202ENST00000586080 NAPBQ9H115 298 aa25.91■■□□□ 1.74
R3HDM4-202ENST00000586080 HPS5Q9UPZ3 1129 aa25.91■■□□□ 1.74
R3HDM4-202ENST00000586080 PDE4AP27815 886 aa25.9■■□□□ 1.74
R3HDM4-202ENST00000586080 ASCC2Q9H1I8 757 aaPredicted RBP25.9■■□□□ 1.74
R3HDM4-202ENST00000586080 HELLSQ9NRZ9 838 aa25.9■■□□□ 1.74
R3HDM4-202ENST00000586080 PTPRFP10586 1907 aa25.9■■□□□ 1.74
R3HDM4-202ENST00000586080 A0A0D9SFI3 127 aa25.89■■□□□ 1.74
R3HDM4-202ENST00000586080 USP14P54578 494 aa25.89■■□□□ 1.74
R3HDM4-202ENST00000586080 NMIQ13287 307 aaPredicted RBP25.89■■□□□ 1.74
R3HDM4-202ENST00000586080 CCDC17Q96LX7 622 aa25.89■■□□□ 1.74
R3HDM4-202ENST00000586080 MKNK2Q9HBH9 465 aa25.89■■□□□ 1.74
R3HDM4-202ENST00000586080 EMILIN3Q9NT22 766 aa25.89■■□□□ 1.74
R3HDM4-202ENST00000586080 LOC285556D6RIA3 1793 aa25.88■■□□□ 1.73
R3HDM4-202ENST00000586080 BCRP11274 1271 aa25.88■■□□□ 1.73
R3HDM4-202ENST00000586080 CLEC10AQ8IUN9 316 aa25.88■■□□□ 1.73
R3HDM4-202ENST00000586080 KIAA1683Q9H0B3 1180 aa25.88■■□□□ 1.73
R3HDM4-202ENST00000586080 FMNL1O95466 1100 aaPredicted RBP25.87■■□□□ 1.73
R3HDM4-202ENST00000586080 PSMC4P43686 418 aa25.87■■□□□ 1.73
R3HDM4-202ENST00000586080 ICA1Q05084 483 aa25.87■■□□□ 1.73
R3HDM4-202ENST00000586080 MCMDC2Q4G0Z9 681 aa25.87■■□□□ 1.73
R3HDM4-202ENST00000586080 ANKRD13CQ8N6S4 541 aa25.87■■□□□ 1.73
R3HDM4-202ENST00000586080 ROBO3Q96MS0 1386 aa25.86■■□□□ 1.73
R3HDM4-202ENST00000586080 ATP2B2Q01814 1243 aa25.86■■□□□ 1.73
R3HDM4-202ENST00000586080 PTPN22Q9Y2R2 807 aa25.86■■□□□ 1.73
R3HDM4-202ENST00000586080 SDSP20132 328 aa25.85■■□□□ 1.73
R3HDM4-202ENST00000586080 VPS53Q5VIR6 699 aa25.85■■□□□ 1.73
R3HDM4-202ENST00000586080 TICAM2Q86XR7 235 aa25.85■■□□□ 1.73
R3HDM4-202ENST00000586080 C12orf42Q96LP6 360 aa25.85■■□□□ 1.73
R3HDM4-202ENST00000586080 ARHGEF10LQ9HCE6 1279 aa25.85■■□□□ 1.73
R3HDM4-202ENST00000586080 DIAPH3Q9NSV4 1193 aa25.85■■□□□ 1.73
R3HDM4-202ENST00000586080 PRDM1O75626 825 aa25.84■■□□□ 1.73
R3HDM4-202ENST00000586080 VCAM1P19320 739 aa25.84■■□□□ 1.73
R3HDM4-202ENST00000586080 CTGFP29279 349 aa25.84■■□□□ 1.73
R3HDM4-202ENST00000586080 HOXA7P31268 230 aaPredicted RBP25.84■■□□□ 1.73
R3HDM4-202ENST00000586080 GCLCP48506 637 aaPredicted RBP25.84■■□□□ 1.73
R3HDM4-202ENST00000586080 FCGRTP55899 365 aa25.84■■□□□ 1.73
R3HDM4-202ENST00000586080 TRIM47Q96LD4 638 aa25.84■■□□□ 1.73
R3HDM4-202ENST00000586080 ZNF287Q9HBT7 754 aa25.84■■□□□ 1.73
R3HDM4-202ENST00000586080 A0A1W2PRG0 241 aa25.83■■□□□ 1.73
R3HDM4-202ENST00000586080 SLC3A2P08195 630 aaKnown RBP25.83■■□□□ 1.73
R3HDM4-202ENST00000586080 RASA1P20936 1047 aa25.83■■□□□ 1.73
R3HDM4-202ENST00000586080 PPARAQ07869 468 aa25.83■■□□□ 1.73
R3HDM4-202ENST00000586080 ZNF589Q86UQ0 364 aaPredicted RBP25.83■■□□□ 1.73
R3HDM4-202ENST00000586080 P2RX7Q99572 595 aaKnown RBP25.83■■□□□ 1.73
R3HDM4-202ENST00000586080 SH2D4AQ9H788 454 aa25.83■■□□□ 1.73
R3HDM4-202ENST00000586080 PTCH2Q9Y6C5 1203 aa25.83■■□□□ 1.73
R3HDM4-202ENST00000586080 USP17L15C9J2P7 530 aa25.82■■□□□ 1.72
R3HDM4-202ENST00000586080 USP17L13C9JLJ4 530 aa25.82■■□□□ 1.72
R3HDM4-202ENST00000586080 USP17L11C9JVI0 530 aa25.82■■□□□ 1.72
R3HDM4-202ENST00000586080 USP17L18D6R9N7 530 aa25.82■■□□□ 1.72
R3HDM4-202ENST00000586080 USP17L22D6RA61 530 aa25.82■■□□□ 1.72
R3HDM4-202ENST00000586080 USP17L17D6RBQ6 530 aa25.82■■□□□ 1.72
R3HDM4-202ENST00000586080 USP17L19D6RCP7 530 aa25.82■■□□□ 1.72
R3HDM4-202ENST00000586080 USP17L20D6RJB6 530 aa25.82■■□□□ 1.72
R3HDM4-202ENST00000586080 FOXP2O15409 715 aa25.82■■□□□ 1.72
R3HDM4-202ENST00000586080 HERVK_113P62684 666 aa25.82■■□□□ 1.72
R3HDM4-202ENST00000586080 USP17L24Q0WX57 530 aa25.82■■□□□ 1.72
R3HDM4-202ENST00000586080 FAM110CQ1W6H9 321 aa25.82■■□□□ 1.72
R3HDM4-202ENST00000586080 TTC22Q5TAA0 569 aa25.82■■□□□ 1.72
R3HDM4-202ENST00000586080 CCDC171Q6TFL3 1326 aa25.82■■□□□ 1.72
R3HDM4-202ENST00000586080 GNRH1P01148 92 aa25.81■■□□□ 1.72
R3HDM4-202ENST00000586080 HOXD10P28358 340 aa25.81■■□□□ 1.72
R3HDM4-202ENST00000586080 PDE4BQ07343 736 aa25.81■■□□□ 1.72
R3HDM4-202ENST00000586080 CWC27Q6UX04 472 aaKnown RBP25.81■■□□□ 1.72
R3HDM4-202ENST00000586080 ZNF444Q8N0Y2 327 aaPredicted RBP25.81■■□□□ 1.72
R3HDM4-202ENST00000586080 RPAP3Q9H6T3 665 aaPredicted RBP25.81■■□□□ 1.72
R3HDM4-202ENST00000586080 KANSL2Q9H9L4 492 aa25.81■■□□□ 1.72
R3HDM4-202ENST00000586080 ZSWIM8A7E2V4 1837 aa25.8■■□□□ 1.72
R3HDM4-202ENST00000586080 HIP1O00291 1037 aa25.8■■□□□ 1.72
R3HDM4-202ENST00000586080 EEF2P13639 858 aaKnown RBP25.8■■□□□ 1.72
R3HDM4-202ENST00000586080 GSPT1P15170 499 aaKnown RBP25.8■■□□□ 1.72
R3HDM4-202ENST00000586080 MFAP1P55081 439 aaKnown RBP25.8■■□□□ 1.72
R3HDM4-202ENST00000586080 PAGR1Q9BTK6 254 aa25.8■■□□□ 1.72
R3HDM4-202ENST00000586080 TNPO2O14787 897 aaKnown RBP25.79■■□□□ 1.72
R3HDM4-202ENST00000586080 RAD21O60216 631 aa25.79■■□□□ 1.72
R3HDM4-202ENST00000586080 CTDSPL2Q05D32 466 aa25.79■■□□□ 1.72
R3HDM4-202ENST00000586080 TANGO6Q9C0B7 1094 aa25.79■■□□□ 1.72
R3HDM4-202ENST00000586080 SRRDQ9UH36 339 aa25.79■■□□□ 1.72
R3HDM4-202ENST00000586080 TMX2Q9Y320 296 aa25.79■■□□□ 1.72
R3HDM4-202ENST00000586080 MYPNQ86TC9 1320 aa25.79■■□□□ 1.72
R3HDM4-202ENST00000586080 PEX10O60683 326 aa25.78■■□□□ 1.72
R3HDM4-202ENST00000586080 HSPD1P10809 573 aaKnown RBP25.78■■□□□ 1.72
R3HDM4-202ENST00000586080 SOX10P56693 466 aa25.78■■□□□ 1.72
R3HDM4-202ENST00000586080 CATSPERGQ6ZRH7 1159 aa25.78■■□□□ 1.72
R3HDM4-202ENST00000586080 SIAH1Q8IUQ4 282 aa25.78■■□□□ 1.72
R3HDM4-202ENST00000586080 SPICE1Q8N0Z3 855 aa25.78■■□□□ 1.72
R3HDM4-202ENST00000586080 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.78■■□□□ 1.72
R3HDM4-202ENST00000586080 MYH8P13535 1937 aa25.77■■□□□ 1.72
R3HDM4-202ENST00000586080 PRMT2P55345 433 aa25.77■■□□□ 1.72
R3HDM4-202ENST00000586080 PRKCZQ05513 592 aa25.77■■□□□ 1.72
R3HDM4-202ENST00000586080 SLC9C1Q4G0N8 1177 aa25.77■■□□□ 1.72
R3HDM4-202ENST00000586080 RAET1EQ8TD07 263 aa25.77■■□□□ 1.72
R3HDM4-202ENST00000586080 GTF3C2Q8WUA4 911 aaPredicted RBP25.77■■□□□ 1.72
R3HDM4-202ENST00000586080 VCPKMTQ9H867 229 aa25.77■■□□□ 1.72
R3HDM4-202ENST00000586080 NEFLP07196 543 aa25.76■■□□□ 1.71
R3HDM4-202ENST00000586080 TSPY3P0CV98 308 aa25.76■■□□□ 1.71
R3HDM4-202ENST00000586080 TSPY8P0CW00 308 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms