RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 MTMR4Q9NYA4 1195 aa15.15■□□□□ 0.02
TRIM47-202ENST00000585333 STX8Q9UNK0 236 aa15.15■□□□□ 0.02
TRIM47-202ENST00000585333 SLC12A7Q9Y666 1083 aa15.15■□□□□ 0.02
TRIM47-202ENST00000585333 PAPPA2Q9BXP8 1791 aa15.14■□□□□ 0.01
TRIM47-202ENST00000585333 USP17L5A8MUK1 530 aa15.14■□□□□ 0.01
TRIM47-202ENST00000585333 PHF20L1A8MW92 1017 aa15.14■□□□□ 0.01
TRIM47-202ENST00000585333 DDAH1O94760 285 aa15.14■□□□□ 0.01
TRIM47-202ENST00000585333 GH2P01242 217 aa15.14■□□□□ 0.01
TRIM47-202ENST00000585333 KIF5BP33176 963 aa15.14■□□□□ 0.01
TRIM47-202ENST00000585333 AK2P54819 239 aa15.14■□□□□ 0.01
TRIM47-202ENST00000585333 EVCP57679 992 aa15.14■□□□□ 0.01
TRIM47-202ENST00000585333 ANTXR2P58335 489 aa15.14■□□□□ 0.01
TRIM47-202ENST00000585333 RAB3GAP1Q15042 981 aa15.14■□□□□ 0.01
TRIM47-202ENST00000585333 ENAHQ8N8S7 591 aaPredicted RBP15.14■□□□□ 0.01
TRIM47-202ENST00000585333 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.14■□□□□ 0.012e-6■■□□□ 12.8
TRIM47-202ENST00000585333 IGDCC4Q8TDY8 1250 aa15.14■□□□□ 0.01
TRIM47-202ENST00000585333 BRF1Q92994 677 aa15.14■□□□□ 0.01
TRIM47-202ENST00000585333 IGKV6D-41A0A0C4DH26 115 aa15.13■□□□□ 0.01
TRIM47-202ENST00000585333 FAM196BA6NMK8 535 aa15.13■□□□□ 0.01
TRIM47-202ENST00000585333 NOVP48745 357 aa15.13■□□□□ 0.01
TRIM47-202ENST00000585333 GNAQP50148 359 aa15.13■□□□□ 0.01
TRIM47-202ENST00000585333 USP14P54578 494 aa15.13■□□□□ 0.01
TRIM47-202ENST00000585333 SEC23AQ15436 765 aa15.13■□□□□ 0.01
TRIM47-202ENST00000585333 MKL1Q969V6 931 aa15.13■□□□□ 0.01
TRIM47-202ENST00000585333 CEP95Q96GE4 821 aa15.13■□□□□ 0.01
TRIM47-202ENST00000585333 LY9Q9HBG7 655 aa15.13■□□□□ 0.01
TRIM47-202ENST00000585333 GBA2Q9HCG7 927 aaPredicted RBP15.13■□□□□ 0.01
TRIM47-202ENST00000585333 GOPCQ9HD26 462 aa15.13■□□□□ 0.01
TRIM47-202ENST00000585333 INCENPQ9NQS7 918 aa15.13■□□□□ 0.01
TRIM47-202ENST00000585333 RBM28Q9NW13 759 aaKnown RBP15.13■□□□□ 0.01
TRIM47-202ENST00000585333 POLR2AP24928 1970 aaKnown RBP15.13■□□□□ 0.01
TRIM47-202ENST00000585333 SSC5DA1L4H1 1573 aa15.12■□□□□ 0.01
TRIM47-202ENST00000585333 K7ELQ4 463 aaPredicted RBP15.12■□□□□ 0.01
TRIM47-202ENST00000585333 KIF3CO14782 793 aa15.12■□□□□ 0.01
TRIM47-202ENST00000585333 ZBTB43O43298 467 aa15.12■□□□□ 0.01
TRIM47-202ENST00000585333 USP2O75604 605 aaPredicted RBP15.12■□□□□ 0.01
TRIM47-202ENST00000585333 CDKL5O76039 1030 aa15.12■□□□□ 0.01
TRIM47-202ENST00000585333 GDF11O95390 407 aa15.12■□□□□ 0.01
TRIM47-202ENST00000585333 POTEIP0CG38 1075 aa15.12■□□□□ 0.01
TRIM47-202ENST00000585333 POTEJP0CG39 1038 aa15.12■□□□□ 0.01
TRIM47-202ENST00000585333 RCSD1Q6JBY9 416 aa15.12■□□□□ 0.01
TRIM47-202ENST00000585333 CDAN1Q8IWY9 1227 aa15.12■□□□□ 0.01
TRIM47-202ENST00000585333 PNMA1Q8ND90 353 aa15.12■□□□□ 0.01
TRIM47-202ENST00000585333 CTCFLQ8NI51 663 aaPredicted RBP15.12■□□□□ 0.01
TRIM47-202ENST00000585333 WDR18Q9BV38 432 aa15.12■□□□□ 0.01
TRIM47-202ENST00000585333 SLKQ9H2G2 1235 aaPredicted RBP15.12■□□□□ 0.01
TRIM47-202ENST00000585333 SCAF8Q9UPN6 1271 aaKnown RBP15.12■□□□□ 0.01
TRIM47-202ENST00000585333 KIF3AQ9Y496 699 aa15.12■□□□□ 0.01
TRIM47-202ENST00000585333 RBM19Q9Y4C8 960 aaKnown RBP15.12■□□□□ 0.01
TRIM47-202ENST00000585333 KLF18A0A0U1RQI7 1052 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 C19orf81C9J6K1 198 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 SMIM22K7EJ46 135 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 CELF2O95319 508 aaKnown RBP15.11■□□□□ 0.01
TRIM47-202ENST00000585333 HSP90AA1P07900 732 aaKnown RBP15.11■□□□□ 0.01
TRIM47-202ENST00000585333 EVX2Q03828 476 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 TOB2Q14106 344 aaPredicted RBP15.11■□□□□ 0.01
TRIM47-202ENST00000585333 SEPT2Q15019 361 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 PRAMEF18Q5VWM3 479 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 APOA5Q6Q788 366 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 CHST3Q7LGC8 479 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 ERO1BQ86YB8 467 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 ZNF654Q8IZM8 581 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 GMCL1P1Q8NEA9 526 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 LPAR1Q92633 364 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 FEZ1Q99689 392 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 LZTS2Q9BRK4 669 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 ZKSCAN3Q9BRR0 538 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 ZNF408Q9H9D4 720 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 IL17RBQ9NRM6 502 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 CLIP2Q9UDT6 1046 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 NAP1L2Q9ULW6 460 aaPredicted RBP15.11■□□□□ 0.01
TRIM47-202ENST00000585333 TACC3Q9Y6A5 838 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 DOCK1Q14185 1865 aa15.11■□□□□ 0.01
TRIM47-202ENST00000585333 GREB1LQ9C091 1923 aaPredicted RBP15.1■□□□□ 0.01
TRIM47-202ENST00000585333 CEP350Q5VT06 3117 aa15.1■□□□□ 0.01
TRIM47-202ENST00000585333 GOLGA8BA8MQT2 603 aa15.1■□□□□ 0.01
TRIM47-202ENST00000585333 ITGBL1O95965 494 aaPredicted RBP15.1■□□□□ 0.01
TRIM47-202ENST00000585333 CPA1P15085 419 aa15.1■□□□□ 0.01
TRIM47-202ENST00000585333 METAP2P50579 478 aaKnown RBP eCLIP15.1■□□□□ 0.01
TRIM47-202ENST00000585333 ATP2B2Q01814 1243 aa15.1■□□□□ 0.01
TRIM47-202ENST00000585333 PPATQ06203 517 aa15.1■□□□□ 0.01
TRIM47-202ENST00000585333 ASPRV1Q53RT3 343 aa15.1■□□□□ 0.01
TRIM47-202ENST00000585333 GPATCH4Q5T3I0 446 aaKnown RBP15.1■□□□□ 0.01
TRIM47-202ENST00000585333 ZNF280CQ8ND82 737 aa15.1■□□□□ 0.01
TRIM47-202ENST00000585333 DCAF4Q8WV16 495 aa15.1■□□□□ 0.01
TRIM47-202ENST00000585333 TMEM47Q9BQJ4 181 aa15.1■□□□□ 0.01
TRIM47-202ENST00000585333 KIAA1683Q9H0B3 1180 aa15.1■□□□□ 0.01
TRIM47-202ENST00000585333 RBM27Q9P2N5 1060 aaKnown RBP15.1■□□□□ 0.01
TRIM47-202ENST00000585333 TMX2Q9Y320 296 aa15.1■□□□□ 0.01
TRIM47-202ENST00000585333 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.1■□□□□ 0.01
TRIM47-202ENST00000585333 NID2Q14112 1375 aa15.1■□□□□ 0.01
TRIM47-202ENST00000585333 USP17L10C9JJH3 530 aa15.09■□□□□ 0.01
TRIM47-202ENST00000585333 CPLX1O14810 134 aa15.09■□□□□ 0.01
TRIM47-202ENST00000585333 EEF2P13639 858 aaKnown RBP15.09■□□□□ 0.01
TRIM47-202ENST00000585333 PDIA4P13667 645 aaKnown RBP15.09■□□□□ 0.01
TRIM47-202ENST00000585333 PTPRAP18433 802 aa15.09■□□□□ 0.01
TRIM47-202ENST00000585333 INPP5BP32019 993 aa15.09■□□□□ 0.01
TRIM47-202ENST00000585333 VGLL4Q14135 290 aa15.09■□□□□ 0.01
TRIM47-202ENST00000585333 LDLRAD1Q5T700 205 aa15.09■□□□□ 0.01
TRIM47-202ENST00000585333 SLC10A4Q96EP9 437 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms