RNA–Protein interactions for RNA: ENST00000585098.5

NDEL1-219, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3 BASIC

Gene NDEL1, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-219ENST00000585098 ACER1Q8TDN7 264 aa28.3■■■□□ 2.12
NDEL1-219ENST00000585098 CCDC17Q96LX7 622 aa28.3■■■□□ 2.12
NDEL1-219ENST00000585098 FAM227BQ96M60 508 aa28.3■■■□□ 2.12
NDEL1-219ENST00000585098 EMILIN3Q9NT22 766 aa28.3■■■□□ 2.12
NDEL1-219ENST00000585098 BCRP11274 1271 aa28.29■■■□□ 2.12
NDEL1-219ENST00000585098 ARHGEF6Q15052 776 aa28.29■■■□□ 2.12
NDEL1-219ENST00000585098 A0A0D9SFI3 127 aa28.28■■■□□ 2.12
NDEL1-219ENST00000585098 CCDC85CA6NKD9 419 aa28.28■■■□□ 2.12
NDEL1-219ENST00000585098 ECM2O94769 699 aaPredicted RBP28.28■■■□□ 2.12
NDEL1-219ENST00000585098 OSBPP22059 807 aa28.28■■■□□ 2.12
NDEL1-219ENST00000585098 ARHGAP39Q9C0H5 1083 aa28.28■■■□□ 2.12
NDEL1-219ENST00000585098 KIAA1683Q9H0B3 1180 aa28.28■■■□□ 2.12
NDEL1-219ENST00000585098 NAPBQ9H115 298 aa28.28■■■□□ 2.12
NDEL1-219ENST00000585098 ASCC2Q9H1I8 757 aaPredicted RBP28.28■■■□□ 2.12
NDEL1-219ENST00000585098 HPS5Q9UPZ3 1129 aa28.28■■■□□ 2.12
NDEL1-219ENST00000585098 NMIQ13287 307 aaPredicted RBP28.27■■■□□ 2.12
NDEL1-219ENST00000585098 MCMDC2Q4G0Z9 681 aa28.27■■■□□ 2.12
NDEL1-219ENST00000585098 ROBO3Q96MS0 1386 aa28.26■■■□□ 2.12
NDEL1-219ENST00000585098 FOXP2O15409 715 aa28.26■■■□□ 2.11
NDEL1-219ENST00000585098 SDSP20132 328 aa28.26■■■□□ 2.11
NDEL1-219ENST00000585098 USP14P54578 494 aa28.26■■■□□ 2.11
NDEL1-219ENST00000585098 HOXA7P31268 230 aaPredicted RBP28.25■■■□□ 2.11
NDEL1-219ENST00000585098 IRX3P78415 501 aaPredicted RBP28.25■■■□□ 2.11
NDEL1-219ENST00000585098 VPS53Q5VIR6 699 aa28.25■■■□□ 2.11
NDEL1-219ENST00000585098 C12orf42Q96LP6 360 aa28.25■■■□□ 2.11
NDEL1-219ENST00000585098 MKNK2Q9HBH9 465 aa28.25■■■□□ 2.11
NDEL1-219ENST00000585098 PTPN22Q9Y2R2 807 aa28.25■■■□□ 2.11
NDEL1-219ENST00000585098 A0A1W2PRG0 241 aa28.24■■■□□ 2.11
NDEL1-219ENST00000585098 CLEC10AQ8IUN9 316 aa28.24■■■□□ 2.11
NDEL1-219ENST00000585098 ANKRD13CQ8N6S4 541 aa28.24■■■□□ 2.11
NDEL1-219ENST00000585098 RASA1P20936 1047 aa28.23■■■□□ 2.11
NDEL1-219ENST00000585098 CTGFP29279 349 aa28.23■■■□□ 2.11
NDEL1-219ENST00000585098 PSMC4P43686 418 aa28.23■■■□□ 2.11
NDEL1-219ENST00000585098 ICA1Q05084 483 aa28.23■■■□□ 2.11
NDEL1-219ENST00000585098 GCLCP48506 637 aaPredicted RBP28.22■■■□□ 2.11
NDEL1-219ENST00000585098 PPARAQ07869 468 aa28.22■■■□□ 2.11
NDEL1-219ENST00000585098 ZNF589Q86UQ0 364 aaPredicted RBP28.22■■■□□ 2.11
NDEL1-219ENST00000585098 SIAH1Q8IUQ4 282 aa28.22■■■□□ 2.11
NDEL1-219ENST00000585098 TRIM47Q96LD4 638 aa28.22■■■□□ 2.11
NDEL1-219ENST00000585098 P2RX7Q99572 595 aaKnown RBP28.22■■■□□ 2.11
NDEL1-219ENST00000585098 FMNL1O95466 1100 aaPredicted RBP28.21■■■□□ 2.11
NDEL1-219ENST00000585098 GNRH1P01148 92 aa28.21■■■□□ 2.11
NDEL1-219ENST00000585098 VCAM1P19320 739 aa28.21■■■□□ 2.11
NDEL1-219ENST00000585098 TTC22Q5TAA0 569 aa28.21■■■□□ 2.11
NDEL1-219ENST00000585098 ZNF287Q9HBT7 754 aa28.21■■■□□ 2.11
NDEL1-219ENST00000585098 ARHGEF10LQ9HCE6 1279 aa28.21■■■□□ 2.11
NDEL1-219ENST00000585098 DIAPH3Q9NSV4 1193 aa28.21■■■□□ 2.11
NDEL1-219ENST00000585098 MYH8P13535 1937 aa28.21■■■□□ 2.11
NDEL1-219ENST00000585098 PRDM1O75626 825 aa28.2■■■□□ 2.1
NDEL1-219ENST00000585098 SLC3A2P08195 630 aaKnown RBP28.2■■■□□ 2.1
NDEL1-219ENST00000585098 GSPT1P15170 499 aaKnown RBP28.2■■■□□ 2.1
NDEL1-219ENST00000585098 FAM110CQ1W6H9 321 aa28.2■■■□□ 2.1
NDEL1-219ENST00000585098 KANSL2Q9H9L4 492 aa28.2■■■□□ 2.1
NDEL1-219ENST00000585098 ZSWIM8A7E2V4 1837 aa28.2■■■□□ 2.1
NDEL1-219ENST00000585098 CCDC171Q6TFL3 1326 aa28.19■■■□□ 2.1
NDEL1-219ENST00000585098 USP17L15C9J2P7 530 aa28.19■■■□□ 2.1
NDEL1-219ENST00000585098 USP17L13C9JLJ4 530 aa28.19■■■□□ 2.1
NDEL1-219ENST00000585098 USP17L11C9JVI0 530 aa28.19■■■□□ 2.1
NDEL1-219ENST00000585098 USP17L18D6R9N7 530 aa28.19■■■□□ 2.1
NDEL1-219ENST00000585098 USP17L22D6RA61 530 aa28.19■■■□□ 2.1
NDEL1-219ENST00000585098 USP17L17D6RBQ6 530 aa28.19■■■□□ 2.1
NDEL1-219ENST00000585098 USP17L19D6RCP7 530 aa28.19■■■□□ 2.1
NDEL1-219ENST00000585098 USP17L20D6RJB6 530 aa28.19■■■□□ 2.1
NDEL1-219ENST00000585098 HIP1O00291 1037 aa28.19■■■□□ 2.1
NDEL1-219ENST00000585098 FCGRTP55899 365 aa28.19■■■□□ 2.1
NDEL1-219ENST00000585098 HERVK_113P62684 666 aa28.19■■■□□ 2.1
NDEL1-219ENST00000585098 ATP2B2Q01814 1243 aa28.19■■■□□ 2.1
NDEL1-219ENST00000585098 USP17L24Q0WX57 530 aa28.19■■■□□ 2.1
NDEL1-219ENST00000585098 CWC27Q6UX04 472 aaKnown RBP28.19■■■□□ 2.1
NDEL1-219ENST00000585098 ZNF444Q8N0Y2 327 aaPredicted RBP28.19■■■□□ 2.1
NDEL1-219ENST00000585098 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.19■■■□□ 2.1
NDEL1-219ENST00000585098 TMX2Q9Y320 296 aa28.19■■■□□ 2.1
NDEL1-219ENST00000585098 EEF2P13639 858 aaKnown RBP28.18■■■□□ 2.1
NDEL1-219ENST00000585098 PDE4BQ07343 736 aa28.18■■■□□ 2.1
NDEL1-219ENST00000585098 ALX1Q15699 326 aa28.18■■■□□ 2.1
NDEL1-219ENST00000585098 RPAP3Q9H6T3 665 aaPredicted RBP28.18■■■□□ 2.1
NDEL1-219ENST00000585098 SH2D4AQ9H788 454 aa28.18■■■□□ 2.1
NDEL1-219ENST00000585098 PTCH2Q9Y6C5 1203 aa28.18■■■□□ 2.1
NDEL1-219ENST00000585098 HSPD1P10809 573 aaKnown RBP28.17■■■□□ 2.1
NDEL1-219ENST00000585098 HOXD10P28358 340 aa28.17■■■□□ 2.1
NDEL1-219ENST00000585098 MFAP1P55081 439 aaKnown RBP28.17■■■□□ 2.1
NDEL1-219ENST00000585098 CATSPERGQ6ZRH7 1159 aa28.17■■■□□ 2.1
NDEL1-219ENST00000585098 FGAP02671 866 aa28.16■■■□□ 2.1
NDEL1-219ENST00000585098 CTDSPL2Q05D32 466 aa28.16■■■□□ 2.1
NDEL1-219ENST00000585098 KIAA1755Q5JYT7 1200 aa28.16■■■□□ 2.1
NDEL1-219ENST00000585098 SRRDQ9UH36 339 aa28.16■■■□□ 2.1
NDEL1-219ENST00000585098 PRMT2P55345 433 aa28.15■■■□□ 2.1
NDEL1-219ENST00000585098 CENPQQ7L2Z9 268 aaPredicted RBP28.15■■■□□ 2.1
NDEL1-219ENST00000585098 VCPKMTQ9H867 229 aa28.15■■■□□ 2.1
NDEL1-219ENST00000585098 MORF4L1Q9UBU8 362 aa28.15■■■□□ 2.1
NDEL1-219ENST00000585098 TNPO2O14787 897 aaKnown RBP28.14■■■□□ 2.1
NDEL1-219ENST00000585098 PEX10O60683 326 aa28.14■■■□□ 2.1
NDEL1-219ENST00000585098 SPICE1Q8N0Z3 855 aa28.14■■■□□ 2.1
NDEL1-219ENST00000585098 LPAR1Q92633 364 aa28.14■■■□□ 2.1
NDEL1-219ENST00000585098 RBPJLQ9UBG7 517 aa28.14■■■□□ 2.1
NDEL1-219ENST00000585098 ANAPC4Q9UJX5 808 aa28.14■■■□□ 2.1
NDEL1-219ENST00000585098 MYPNQ86TC9 1320 aa28.14■■■□□ 2.09
NDEL1-219ENST00000585098 HTTP42858 3142 aa28.14■■■□□ 2.09
NDEL1-219ENST00000585098 GTF3C2Q8WUA4 911 aaPredicted RBP28.13■■■□□ 2.09
NDEL1-219ENST00000585098 PAGR1Q9BTK6 254 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms