RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 WWC3Q9ULE0 1092 aa7.06□□□□□ -1.28
CDH8-213ENST00000584966 SUPT16HQ9Y5B9 1047 aaKnown RBP7.06□□□□□ -1.28
CDH8-213ENST00000584966 PCDHB9Q9Y5E1 797 aa7.06□□□□□ -1.28
CDH8-213ENST00000584966 LRRFIP2Q9Y608 721 aaKnown RBP7.06□□□□□ -1.28
CDH8-213ENST00000584966 SCN9AQ15858 1988 aa7.06□□□□□ -1.28
CDH8-213ENST00000584966 ZBBXA8MT70 800 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 PATL2C9JE40 543 aaKnown RBP7.05□□□□□ -1.28
CDH8-213ENST00000584966 DYRK3O43781 588 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 C21orf2O43822 256 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 ATP9BO43861 1147 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 GNAI3P08754 354 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 ARAFP10398 606 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 HSP90B1P14625 803 aaKnown RBP7.05□□□□□ -1.28
CDH8-213ENST00000584966 SCTRP47872 440 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 RPS8P62241 208 aaKnown RBP7.05□□□□□ -1.28
CDH8-213ENST00000584966 KCNA1Q09470 495 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 MTX1Q13505 466 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 LBRQ14739 615 aaKnown RBP7.05□□□□□ -1.28
CDH8-213ENST00000584966 CCDC152Q4G0S7 254 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 EFHC2Q5JST6 749 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 DDX46Q7L014 1031 aaKnown RBP7.05□□□□□ -1.28
CDH8-213ENST00000584966 ITPRIPQ8IWB1 547 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 SP8Q8IXZ3 490 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 FTSJ3Q8IY81 847 aaKnown RBP7.05□□□□□ -1.28
CDH8-213ENST00000584966 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.05□□□□□ -1.28
CDH8-213ENST00000584966 RPGRQ92834 1020 aaKnown RBP7.05□□□□□ -1.28
CDH8-213ENST00000584966 TRIM11Q96F44 468 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 ZNF594Q96JF6 807 aaPredicted RBP7.05□□□□□ -1.28
CDH8-213ENST00000584966 PLVAPQ9BX97 442 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 GZF1Q9H116 711 aaPredicted RBP7.05□□□□□ -1.28
CDH8-213ENST00000584966 BCS1LQ9Y276 419 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 ATP6V0A2Q9Y487 856 aa7.05□□□□□ -1.28
CDH8-213ENST00000584966 TIAM2Q8IVF5 1701 aa7.04□□□□□ -1.28
CDH8-213ENST00000584966 COL4A5P29400 1685 aa7.04□□□□□ -1.28
CDH8-213ENST00000584966 MYH13Q9UKX3 1938 aa7.04□□□□□ -1.28
CDH8-213ENST00000584966 PNMA6EA0A0J9YXQ4 647 aa7.04□□□□□ -1.28
CDH8-213ENST00000584966 WTIPA6NIX2 430 aaPredicted RBP7.04□□□□□ -1.28
CDH8-213ENST00000584966 NFKBIEO00221 500 aa7.04□□□□□ -1.28
CDH8-213ENST00000584966 GNAI2P04899 355 aa7.04□□□□□ -1.28
CDH8-213ENST00000584966 UBTFL1P0CB47 393 aaPredicted RBP7.04□□□□□ -1.28
CDH8-213ENST00000584966 SPATA31C1P0DKV0 1188 aa7.04□□□□□ -1.28
CDH8-213ENST00000584966 ATP8B2P98198 1209 aa7.04□□□□□ -1.28
CDH8-213ENST00000584966 CENPCQ03188 943 aa7.04□□□□□ -1.28
CDH8-213ENST00000584966 PTPN12Q05209 780 aaKnown RBP7.04□□□□□ -1.28
CDH8-213ENST00000584966 SIRT2Q8IXJ6 389 aa7.04□□□□□ -1.28
CDH8-213ENST00000584966 NDFIP2Q9NV92 336 aa7.04□□□□□ -1.28
CDH8-213ENST00000584966 ARAP2Q8WZ64 1704 aa7.04□□□□□ -1.28
CDH8-213ENST00000584966 MYO5AQ9Y4I1 1855 aaKnown RBP7.03□□□□□ -1.28
CDH8-213ENST00000584966 TMEM88BA6NKF7 163 aa7.03□□□□□ -1.28
CDH8-213ENST00000584966 MSX1P28360 303 aa7.03□□□□□ -1.28
CDH8-213ENST00000584966 GPR162Q16538 588 aa7.03□□□□□ -1.28
CDH8-213ENST00000584966 PRSS36Q5K4E3 855 aa7.03□□□□□ -1.28
CDH8-213ENST00000584966 TMCO4Q5TGY1 634 aa7.03□□□□□ -1.28
CDH8-213ENST00000584966 KLHDC4Q8TBB5 520 aa7.03□□□□□ -1.28
CDH8-213ENST00000584966 CRBNQ96SW2 442 aa7.03□□□□□ -1.28
CDH8-213ENST00000584966 RTFDC1Q9BY42 306 aaPredicted RBP7.03□□□□□ -1.28
CDH8-213ENST00000584966 PUS3Q9BZE2 481 aaKnown RBP7.03□□□□□ -1.28
CDH8-213ENST00000584966 OSBPL3Q9H4L5 887 aa7.03□□□□□ -1.28
CDH8-213ENST00000584966 BSDC1Q9NW68 430 aaPredicted RBP7.03□□□□□ -1.28
CDH8-213ENST00000584966 DDX19BQ9UMR2 479 aa7.03□□□□□ -1.28
CDH8-213ENST00000584966 MINPP1Q9UNW1 487 aa7.03□□□□□ -1.28
CDH8-213ENST00000584966 RIPOR2Q9Y4F9 1068 aa7.03□□□□□ -1.28
CDH8-213ENST00000584966 AKAP11Q9UKA4 1901 aa7.03□□□□□ -1.28
CDH8-213ENST00000584966 IRS2Q9Y4H2 1338 aa7.02□□□□□ -1.28
CDH8-213ENST00000584966 ANKRD18BA2A2Z9 1011 aa7.02□□□□□ -1.29
CDH8-213ENST00000584966 CARNS1A5YM72 827 aa7.02□□□□□ -1.29
CDH8-213ENST00000584966 GPSM2P81274 684 aa7.02□□□□□ -1.29
CDH8-213ENST00000584966 IFIT5Q13325 482 aaKnown RBP7.02□□□□□ -1.29
CDH8-213ENST00000584966 LRRC24Q50LG9 513 aa7.02□□□□□ -1.29
CDH8-213ENST00000584966 CEP85Q6P2H3 762 aa7.02□□□□□ -1.29
CDH8-213ENST00000584966 ATG9AQ7Z3C6 839 aa7.02□□□□□ -1.29
CDH8-213ENST00000584966 TMC4Q7Z404 712 aa7.02□□□□□ -1.29
CDH8-213ENST00000584966 ANKRD18AQ8IVF6 992 aa7.02□□□□□ -1.29
CDH8-213ENST00000584966 SSH3Q8TE77 659 aa7.02□□□□□ -1.29
CDH8-213ENST00000584966 ZSCAN10Q96SZ4 725 aaPredicted RBP7.02□□□□□ -1.29
CDH8-213ENST00000584966 CDC5LQ99459 802 aaKnown RBP7.02□□□□□ -1.29
CDH8-213ENST00000584966 COPRSQ9NQ92 184 aa7.02□□□□□ -1.29
CDH8-213ENST00000584966 POLLQ9UGP5 575 aa7.02□□□□□ -1.29
CDH8-213ENST00000584966 PA2G4Q9UQ80 394 aaKnown RBP7.02□□□□□ -1.29
CDH8-213ENST00000584966 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.02□□□□□ -1.29
CDH8-213ENST00000584966 LTBP3Q9NS15 1303 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 POLR2AP24928 1970 aaKnown RBP7.01□□□□□ -1.29
CDH8-213ENST00000584966 SNAP23O00161 211 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 PIK3CDO00329 1044 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 SRGAP3O43295 1099 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 GRIN3BO60391 1043 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 IL2RAP01589 272 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 CCDC57Q2TAC2 916 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 C4orf17Q53FE4 359 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 CCDC93Q567U6 631 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 ARHGAP27Q6ZUM4 889 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 RTKN2Q8IZC4 609 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 VGLL2Q8N8G2 317 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 RGS22Q8NE09 1264 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 EXOC6Q8TAG9 804 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 PSMD1Q99460 953 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 ESYT1Q9BSJ8 1104 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 HDAC5Q9UQL6 1122 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 CHMP3Q9Y3E7 222 aa7.01□□□□□ -1.29
CDH8-213ENST00000584966 EYA2O00167 538 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms