RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 CST9Q5W186 159 aa21.52■■□□□ 1.04
RFFL-211ENST00000584541 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.52■■□□□ 1.04
RFFL-211ENST00000584541 MOB2Q70IA6 237 aa21.52■■□□□ 1.04
RFFL-211ENST00000584541 CEP95Q96GE4 821 aa21.52■■□□□ 1.04
RFFL-211ENST00000584541 TCEANC2Q96MN5 208 aa21.52■■□□□ 1.04
RFFL-211ENST00000584541 TTC14Q96N46 770 aa21.52■■□□□ 1.04
RFFL-211ENST00000584541 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.52■■□□□ 1.04
RFFL-211ENST00000584541 STX8Q9UNK0 236 aa21.52■■□□□ 1.04
RFFL-211ENST00000584541 IGKV6D-41A0A0C4DH26 115 aa21.51■■□□□ 1.03
RFFL-211ENST00000584541 USP17L5A8MUK1 530 aa21.51■■□□□ 1.03
RFFL-211ENST00000584541 ST18O60284 1047 aa21.51■■□□□ 1.03
RFFL-211ENST00000584541 NMT2O60551 498 aa21.51■■□□□ 1.03
RFFL-211ENST00000584541 TTLL1O95922 423 aa21.51■■□□□ 1.03
RFFL-211ENST00000584541 JAG1P78504 1218 aa21.51■■□□□ 1.03
RFFL-211ENST00000584541 ICA1Q05084 483 aa21.51■■□□□ 1.03
RFFL-211ENST00000584541 Q6ZUG5 572 aa21.51■■□□□ 1.03
RFFL-211ENST00000584541 DGKHQ86XP1 1220 aa21.51■■□□□ 1.03
RFFL-211ENST00000584541 TMTC2Q8N394 836 aa21.51■■□□□ 1.03
RFFL-211ENST00000584541 LRRC2Q9BYS8 371 aa21.51■■□□□ 1.03
RFFL-211ENST00000584541 TBC1D2Q9BYX2 928 aa21.51■■□□□ 1.03
RFFL-211ENST00000584541 AS3MTQ9HBK9 375 aa21.51■■□□□ 1.03
RFFL-211ENST00000584541 ARHGEF10LQ9HCE6 1279 aa21.51■■□□□ 1.03
RFFL-211ENST00000584541 IL17RBQ9NRM6 502 aa21.51■■□□□ 1.03
RFFL-211ENST00000584541 MTMR4Q9NYA4 1195 aa21.51■■□□□ 1.03
RFFL-211ENST00000584541 PHIPQ8WWQ0 1821 aa21.5■■□□□ 1.03
RFFL-211ENST00000584541 GUCY1A2P33402 732 aa21.5■■□□□ 1.03
RFFL-211ENST00000584541 ATP2B2Q01814 1243 aa21.5■■□□□ 1.03
RFFL-211ENST00000584541 COL9A3Q14050 684 aaPredicted RBP21.5■■□□□ 1.03
RFFL-211ENST00000584541 ANKRD1Q15327 319 aa21.5■■□□□ 1.03
RFFL-211ENST00000584541 SHROOM1Q2M3G4 852 aaPredicted RBP21.5■■□□□ 1.03
RFFL-211ENST00000584541 LDLRAD1Q5T700 205 aa21.5■■□□□ 1.03
RFFL-211ENST00000584541 IFIT1BQ5T764 474 aaKnown RBP21.5■■□□□ 1.03
RFFL-211ENST00000584541 ENAHQ8N8S7 591 aaPredicted RBP21.5■■□□□ 1.03
RFFL-211ENST00000584541 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.5■■□□□ 1.03
RFFL-211ENST00000584541 NYAP2Q9P242 653 aa21.5■■□□□ 1.03
RFFL-211ENST00000584541 SNCAIPQ9Y6H5 919 aa21.5■■□□□ 1.03
RFFL-211ENST00000584541 SH2B2O14492 632 aaPredicted RBP21.49■■□□□ 1.03
RFFL-211ENST00000584541 PTPRAP18433 802 aa21.49■■□□□ 1.03
RFFL-211ENST00000584541 LIFRP42702 1097 aa21.49■■□□□ 1.03
RFFL-211ENST00000584541 SEC23AQ15436 765 aa21.49■■□□□ 1.03
RFFL-211ENST00000584541 NFXL1Q6ZNB6 911 aa21.49■■□□□ 1.03
RFFL-211ENST00000584541 IGDCC4Q8TDY8 1250 aa21.49■■□□□ 1.03
RFFL-211ENST00000584541 SLC10A4Q96EP9 437 aa21.49■■□□□ 1.03
RFFL-211ENST00000584541 ALDH8A1Q9H2A2 487 aaPredicted RBP21.49■■□□□ 1.03
RFFL-211ENST00000584541 SH2D4AQ9H788 454 aa21.49■■□□□ 1.03
RFFL-211ENST00000584541 CLIP2Q9UDT6 1046 aa21.49■■□□□ 1.03
RFFL-211ENST00000584541 CCDC69A6NI79 296 aa21.48■■□□□ 1.03
RFFL-211ENST00000584541 TMEM88BA6NKF7 163 aa21.48■■□□□ 1.03
RFFL-211ENST00000584541 EEF2P13639 858 aaKnown RBP21.48■■□□□ 1.03
RFFL-211ENST00000584541 FBXL16Q8N461 479 aa21.48■■□□□ 1.03
RFFL-211ENST00000584541 ANKS1AQ92625 1134 aa21.48■■□□□ 1.03
RFFL-211ENST00000584541 KAT14Q9H8E8 782 aa21.48■■□□□ 1.03
RFFL-211ENST00000584541 ELP3Q9H9T3 547 aa21.48■■□□□ 1.03
RFFL-211ENST00000584541 LY9Q9HBG7 655 aa21.48■■□□□ 1.03
RFFL-211ENST00000584541 TOP1P11387 765 aaKnown RBP21.47■■□□□ 1.03
RFFL-211ENST00000584541 NOVP48745 357 aa21.47■■□□□ 1.03
RFFL-211ENST00000584541 HUNKP57058 714 aa21.47■■□□□ 1.03
RFFL-211ENST00000584541 ERO1BQ86YB8 467 aa21.47■■□□□ 1.03
RFFL-211ENST00000584541 CLEC10AQ8IUN9 316 aa21.47■■□□□ 1.03
RFFL-211ENST00000584541 BRF1Q92994 677 aa21.47■■□□□ 1.03
RFFL-211ENST00000584541 CLMNQ96JQ2 1002 aa21.47■■□□□ 1.03
RFFL-211ENST00000584541 FEZ1Q99689 392 aa21.47■■□□□ 1.03
RFFL-211ENST00000584541 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.47■■□□□ 1.03
RFFL-211ENST00000584541 ZHX2Q9Y6X8 837 aa21.47■■□□□ 1.03
RFFL-211ENST00000584541 AK2P54819 239 aa21.46■■□□□ 1.03
RFFL-211ENST00000584541 PPATQ06203 517 aa21.46■■□□□ 1.03
RFFL-211ENST00000584541 RCSD1Q6JBY9 416 aa21.46■■□□□ 1.03
RFFL-211ENST00000584541 SYNE3Q6ZMZ3 975 aa21.46■■□□□ 1.03
RFFL-211ENST00000584541 TMEM47Q9BQJ4 181 aa21.46■■□□□ 1.03
RFFL-211ENST00000584541 WDR18Q9BV38 432 aa21.46■■□□□ 1.03
RFFL-211ENST00000584541 AGXT2Q9BYV1 514 aa21.46■■□□□ 1.03
RFFL-211ENST00000584541 ABT1Q9ULW3 272 aaKnown RBP21.46■■□□□ 1.03
RFFL-211ENST00000584541 SYNPO2Q9UMS6 1093 aa21.46■■□□□ 1.03
RFFL-211ENST00000584541 SPDYE5A6NIY4 337 aa21.45■■□□□ 1.02
RFFL-211ENST00000584541 TOB2Q14106 344 aaPredicted RBP21.45■■□□□ 1.02
RFFL-211ENST00000584541 CATIPQ7Z7H3 387 aa21.45■■□□□ 1.02
RFFL-211ENST00000584541 CCDC84Q86UT8 332 aaPredicted RBP21.45■■□□□ 1.02
RFFL-211ENST00000584541 SGMS1Q86VZ5 419 aa21.45■■□□□ 1.02
RFFL-211ENST00000584541 ZNF280CQ8ND82 737 aa21.45■■□□□ 1.02
RFFL-211ENST00000584541 MKL1Q969V6 931 aa21.45■■□□□ 1.02
RFFL-211ENST00000584541 GPHNQ9NQX3 736 aaPredicted RBP21.45■■□□□ 1.02
RFFL-211ENST00000584541 MCM2P49736 904 aa21.44■■□□□ 1.02
RFFL-211ENST00000584541 SAPCD2Q86UD0 394 aa21.44■■□□□ 1.02
RFFL-211ENST00000584541 PNMA1Q8ND90 353 aa21.44■■□□□ 1.02
RFFL-211ENST00000584541 OPTNQ96CV9 577 aa21.44■■□□□ 1.02
RFFL-211ENST00000584541 OTUD5Q96G74 571 aa21.44■■□□□ 1.02
RFFL-211ENST00000584541 GOPCQ9HD26 462 aa21.44■■□□□ 1.02
RFFL-211ENST00000584541 NAP1L2Q9ULW6 460 aaPredicted RBP21.44■■□□□ 1.02
RFFL-211ENST00000584541 TMX2Q9Y320 296 aa21.44■■□□□ 1.02
RFFL-211ENST00000584541 SLC12A7Q9Y666 1083 aa21.44■■□□□ 1.02
RFFL-211ENST00000584541 TLL2Q9Y6L7 1015 aa21.44■■□□□ 1.02
RFFL-211ENST00000584541 PTPRFP10586 1907 aa21.43■■□□□ 1.02
RFFL-211ENST00000584541 KLF18A0A0U1RQI7 1052 aa21.43■■□□□ 1.02
RFFL-211ENST00000584541 USP17L10C9JJH3 530 aa21.43■■□□□ 1.02
RFFL-211ENST00000584541 APOBRQ0VD83 1088 aa21.43■■□□□ 1.02
RFFL-211ENST00000584541 SPP2Q13103 211 aa21.43■■□□□ 1.02
RFFL-211ENST00000584541 PPIL2Q13356 520 aa21.43■■□□□ 1.02
RFFL-211ENST00000584541 SIAH1Q8IUQ4 282 aa21.43■■□□□ 1.02
RFFL-211ENST00000584541 LRRC47Q8N1G4 583 aaKnown RBP21.43■■□□□ 1.02
RFFL-211ENST00000584541 AFG3L2Q9Y4W6 797 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms