RNA–Protein interactions for RNA: ENST00000584527.1

SPECC1-223, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 3 BASIC

Gene SPECC1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-223ENST00000584527 SHROOM1Q2M3G4 852 aaPredicted RBP18.3■□□□□ 0.52
SPECC1-223ENST00000584527 USP17L2Q6R6M4 530 aa18.3■□□□□ 0.52
SPECC1-223ENST00000584527 TRIB2Q92519 343 aa18.3■□□□□ 0.52
SPECC1-223ENST00000584527 PAWRQ96IZ0 340 aaKnown RBP18.3■□□□□ 0.52
SPECC1-223ENST00000584527 EMILIN3Q9NT22 766 aa18.3■□□□□ 0.52
SPECC1-223ENST00000584527 RBPJLQ9UBG7 517 aa18.3■□□□□ 0.52
SPECC1-223ENST00000584527 SERPINB13Q9UIV8 391 aa18.3■□□□□ 0.52
SPECC1-223ENST00000584527 ERVK-9P63128 1117 aa18.29■□□□□ 0.52
SPECC1-223ENST00000584527 ERVK-24P63145 666 aa18.29■□□□□ 0.52
SPECC1-223ENST00000584527 MAP3K12Q12852 859 aa18.29■□□□□ 0.52
SPECC1-223ENST00000584527 USP6NLQ92738 828 aa18.29■□□□□ 0.52
SPECC1-223ENST00000584527 SAP30BPQ9UHR5 308 aaKnown RBP18.29■□□□□ 0.52
SPECC1-223ENST00000584527 OGDHLQ9ULD0 1010 aa18.29■□□□□ 0.52
SPECC1-223ENST00000584527 SZT2Q5T011 3432 aa18.29■□□□□ 0.52
SPECC1-223ENST00000584527 TTC41PQ6P2S7 1318 aa18.28■□□□□ 0.52
SPECC1-223ENST00000584527 GH2P01242 217 aa18.28■□□□□ 0.52
SPECC1-223ENST00000584527 USP5P45974 858 aa18.28■□□□□ 0.52
SPECC1-223ENST00000584527 MNX1P50219 401 aaPredicted RBP18.28■□□□□ 0.52
SPECC1-223ENST00000584527 TTC6Q86TZ1 520 aa18.28■□□□□ 0.52
SPECC1-223ENST00000584527 MAGEB6Q8N7X4 407 aa18.28■□□□□ 0.52
SPECC1-223ENST00000584527 MIGA1Q8NAN2 632 aa18.28■□□□□ 0.52
SPECC1-223ENST00000584527 DIS3LQ8TF46 1054 aaKnown RBP18.28■□□□□ 0.52
SPECC1-223ENST00000584527 USP14P54578 494 aa18.27■□□□□ 0.52
SPECC1-223ENST00000584527 NUCB1Q02818 461 aa18.27■□□□□ 0.52
SPECC1-223ENST00000584527 TRIM32Q13049 653 aa18.27■□□□□ 0.52
SPECC1-223ENST00000584527 MORN1Q5T089 497 aa18.27■□□□□ 0.52
SPECC1-223ENST00000584527 LBX2Q6XYB7 198 aa18.27■□□□□ 0.52
SPECC1-223ENST00000584527 GPR142Q7Z601 462 aa18.27■□□□□ 0.52
SPECC1-223ENST00000584527 HAUS7Q99871 368 aa18.27■□□□□ 0.52
SPECC1-223ENST00000584527 RIOK1Q9BRS2 568 aaKnown RBP18.27■□□□□ 0.52
SPECC1-223ENST00000584527 NBPF3Q9H094 633 aa18.27■□□□□ 0.52
SPECC1-223ENST00000584527 KIAA1683Q9H0B3 1180 aa18.27■□□□□ 0.52
SPECC1-223ENST00000584527 BOLA2Q9H3K6 86 aa18.27■□□□□ 0.52
SPECC1-223ENST00000584527 ANTXR1Q9H6X2 564 aa18.27■□□□□ 0.52
SPECC1-223ENST00000584527 ERC2O15083 957 aa18.26■□□□□ 0.51
SPECC1-223ENST00000584527 PRKAR2AP13861 404 aaKnown RBP18.26■□□□□ 0.51
SPECC1-223ENST00000584527 CYP2B6P20813 491 aa18.26■□□□□ 0.51
SPECC1-223ENST00000584527 RGS2P41220 211 aa18.26■□□□□ 0.51
SPECC1-223ENST00000584527 POTEEQ6S8J3 1075 aa18.26■□□□□ 0.51
SPECC1-223ENST00000584527 CHD1LQ86WJ1 897 aa18.26■□□□□ 0.51
SPECC1-223ENST00000584527 APBA2Q99767 749 aa18.26■□□□□ 0.51
SPECC1-223ENST00000584527 PORCNQ9H237 461 aa18.26■□□□□ 0.51
SPECC1-223ENST00000584527 RABGAP1Q9Y3P9 1069 aa18.26■□□□□ 0.51
SPECC1-223ENST00000584527 NAV1Q8NEY1 1877 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 USP17L15C9J2P7 530 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 USP17L13C9JLJ4 530 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 USP17L11C9JVI0 530 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 USP17L18D6R9N7 530 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 USP17L22D6RA61 530 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 USP17L17D6RBQ6 530 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 USP17L19D6RCP7 530 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 USP17L20D6RJB6 530 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 ZKSCAN1P17029 563 aaPredicted RBP18.25■□□□□ 0.51
SPECC1-223ENST00000584527 MX1P20591 662 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 BMP8BP34820 402 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 USP17L24Q0WX57 530 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 Q3C1V9 767 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 B4GALNT3Q6L9W6 998 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 PLEKHH3Q7Z736 793 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 DNAJC2Q99543 621 aaKnown RBP18.25■□□□□ 0.51
SPECC1-223ENST00000584527 FEZ1Q99689 392 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 PAG1Q9NWQ8 432 aa18.25■□□□□ 0.51
SPECC1-223ENST00000584527 SALL3Q9BXA9 1300 aa18.24■□□□□ 0.51
SPECC1-223ENST00000584527 GOLIM4O00461 696 aa18.24■□□□□ 0.51
SPECC1-223ENST00000584527 PEX10O60683 326 aa18.24■□□□□ 0.51
SPECC1-223ENST00000584527 GLRX3O76003 335 aaKnown RBP18.24■□□□□ 0.51
SPECC1-223ENST00000584527 VCAM1P19320 739 aa18.24■□□□□ 0.51
SPECC1-223ENST00000584527 CCNA1P78396 465 aa18.24■□□□□ 0.51
SPECC1-223ENST00000584527 GABPAQ06546 454 aa18.24■□□□□ 0.51
SPECC1-223ENST00000584527 ABCB5Q2M3G0 1257 aa18.24■□□□□ 0.51
SPECC1-223ENST00000584527 CERKLQ49MI3 558 aaPredicted RBP18.24■□□□□ 0.51
SPECC1-223ENST00000584527 CATSPERGQ6ZRH7 1159 aa18.24■□□□□ 0.51
SPECC1-223ENST00000584527 GDF15Q99988 308 aa18.24■□□□□ 0.51
SPECC1-223ENST00000584527 PAGR1Q9BTK6 254 aa18.24■□□□□ 0.51
SPECC1-223ENST00000584527 LNPKQ9C0E8 428 aa18.24■□□□□ 0.51
SPECC1-223ENST00000584527 C11orf49Q9H6J7 331 aa18.24■□□□□ 0.51
SPECC1-223ENST00000584527 STAP2Q9UGK3 403 aa18.24■□□□□ 0.51
SPECC1-223ENST00000584527 NDUFB9Q9Y6M9 179 aa18.24■□□□□ 0.51
SPECC1-223ENST00000584527 CNMDO75829 334 aa18.23■□□□□ 0.51
SPECC1-223ENST00000584527 SHMT1P34896 483 aa18.23■□□□□ 0.51
SPECC1-223ENST00000584527 CACNB2Q08289 660 aaPredicted RBP18.23■□□□□ 0.51
SPECC1-223ENST00000584527 CCAR1Q8IX12 1150 aaKnown RBP18.23■□□□□ 0.51
SPECC1-223ENST00000584527 OTUD7AQ8TE49 926 aaPredicted RBP18.23■□□□□ 0.51
SPECC1-223ENST00000584527 CABP5Q9NP86 173 aa18.23■□□□□ 0.51
SPECC1-223ENST00000584527 COL6A1P12109 1028 aa18.22■□□□□ 0.51
SPECC1-223ENST00000584527 PLCD1P51178 756 aa18.22■□□□□ 0.51
SPECC1-223ENST00000584527 MAP2K5Q13163 448 aa18.22■□□□□ 0.51
SPECC1-223ENST00000584527 RAB3GAP1Q15042 981 aa18.22■□□□□ 0.51
SPECC1-223ENST00000584527 ERICH6BQ5W0A0 696 aa18.22■□□□□ 0.51
SPECC1-223ENST00000584527 CRNKL1Q9BZJ0 848 aaKnown RBP18.22■□□□□ 0.51
SPECC1-223ENST00000584527 PFASO15067 1338 aa18.22■□□□□ 0.51
SPECC1-223ENST00000584527 ZNF236Q9UL36 1845 aa18.21■□□□□ 0.51
SPECC1-223ENST00000584527 MAGEB6P1A0A0J9YX57 407 aa18.21■□□□□ 0.51
SPECC1-223ENST00000584527 HOXC6P09630 235 aa18.21■□□□□ 0.51
SPECC1-223ENST00000584527 PDE6AP16499 860 aa18.21■□□□□ 0.51
SPECC1-223ENST00000584527 PDE1AP54750 535 aa18.21■□□□□ 0.51
SPECC1-223ENST00000584527 LHX8Q68G74 356 aa18.21■□□□□ 0.51
SPECC1-223ENST00000584527 C7orf61Q8IZ16 206 aa18.21■□□□□ 0.51
SPECC1-223ENST00000584527 PI4K2BQ8TCG2 481 aa18.21■□□□□ 0.51
SPECC1-223ENST00000584527 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms