RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, human

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCD2-210	ENST00000584400	IRX3	P78415	501 aa	Predicted RBP	32.47	■■■□□ 2.79
SMARCD2-210	ENST00000584400	C12orf42	Q96LP6	360 aa		32.47	■■■□□ 2.79
SMARCD2-210	ENST00000584400	HOXD10	P28358	340 aa		32.46	■■■□□ 2.79
SMARCD2-210	ENST00000584400	PRMT2	P55345	433 aa		32.46	■■■□□ 2.79
SMARCD2-210	ENST00000584400	SEPT2	Q15019	361 aa		32.46	■■■□□ 2.79
SMARCD2-210	ENST00000584400	NAPB	Q9H115	298 aa		32.46	■■■□□ 2.79
SMARCD2-210	ENST00000584400	ASCC2	Q9H1I8	757 aa	Predicted RBP	32.46	■■■□□ 2.79
SMARCD2-210	ENST00000584400	GUCY1A2	P33402	732 aa		32.45	■■■□□ 2.79
SMARCD2-210	ENST00000584400	MKNK2	Q9HBH9	465 aa		32.45	■■■□□ 2.79
SMARCD2-210	ENST00000584400	EMILIN3	Q9NT22	766 aa		32.45	■■■□□ 2.79
SMARCD2-210	ENST00000584400	SLC3A2	P08195	630 aa	Known RBP	32.44	■■■□□ 2.78
SMARCD2-210	ENST00000584400	PSMC4	P43686	418 aa		32.44	■■■□□ 2.78
SMARCD2-210	ENST00000584400	FCGRT	P55899	365 aa		32.44	■■■□□ 2.78
SMARCD2-210	ENST00000584400	SH2D4A	Q9H788	454 aa		32.44	■■■□□ 2.78
SMARCD2-210	ENST00000584400	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	32.44	■■■□□ 2.78
SMARCD2-210	ENST00000584400	PTPRF	P10586	1907 aa		32.43	■■■□□ 2.78
SMARCD2-210	ENST00000584400	FMNL1	O95466	1100 aa	Predicted RBP	32.43	■■■□□ 2.78
SMARCD2-210	ENST00000584400	AKR1B1	P15121	316 aa		32.43	■■■□□ 2.78
SMARCD2-210	ENST00000584400	MCMDC2	Q4G0Z9	681 aa		32.43	■■■□□ 2.78
SMARCD2-210	ENST00000584400	ARHGEF10L	Q9HCE6	1279 aa		32.43	■■■□□ 2.78
SMARCD2-210	ENST00000584400	LOC285556	D6RIA3	1793 aa		32.42	■■■□□ 2.78
SMARCD2-210	ENST00000584400	ZYX	Q15942	572 aa	Known RBP	32.42	■■■□□ 2.78
SMARCD2-210	ENST00000584400	FAM110C	Q1W6H9	321 aa		32.42	■■■□□ 2.78
SMARCD2-210	ENST00000584400	ACER1	Q8TDN7	264 aa		32.42	■■■□□ 2.78
SMARCD2-210	ENST00000584400	GTF3C2	Q8WUA4	911 aa	Predicted RBP	32.42	■■■□□ 2.78
SMARCD2-210	ENST00000584400	ROBO3	Q96MS0	1386 aa		32.42	■■■□□ 2.78
SMARCD2-210	ENST00000584400	ICA1	Q05084	483 aa		32.41	■■■□□ 2.78
SMARCD2-210	ENST00000584400	ANKRD13C	Q8N6S4	541 aa		32.41	■■■□□ 2.78
SMARCD2-210	ENST00000584400	ARHGAP39	Q9C0H5	1083 aa		32.41	■■■□□ 2.78
SMARCD2-210	ENST00000584400	KANSL2	Q9H9L4	492 aa		32.41	■■■□□ 2.78
SMARCD2-210	ENST00000584400	USP17L15	C9J2P7	530 aa		32.4	■■■□□ 2.78
SMARCD2-210	ENST00000584400	USP17L13	C9JLJ4	530 aa		32.4	■■■□□ 2.78
SMARCD2-210	ENST00000584400	USP17L11	C9JVI0	530 aa		32.4	■■■□□ 2.78
SMARCD2-210	ENST00000584400	USP17L18	D6R9N7	530 aa		32.4	■■■□□ 2.78
SMARCD2-210	ENST00000584400	USP17L22	D6RA61	530 aa		32.4	■■■□□ 2.78
SMARCD2-210	ENST00000584400	USP17L17	D6RBQ6	530 aa		32.4	■■■□□ 2.78
SMARCD2-210	ENST00000584400	USP17L19	D6RCP7	530 aa		32.4	■■■□□ 2.78
SMARCD2-210	ENST00000584400	USP17L20	D6RJB6	530 aa		32.4	■■■□□ 2.78
SMARCD2-210	ENST00000584400	HIP1	O00291	1037 aa		32.4	■■■□□ 2.78
SMARCD2-210	ENST00000584400	MFAP1	P55081	439 aa	Known RBP	32.4	■■■□□ 2.78
SMARCD2-210	ENST00000584400	USP17L24	Q0WX57	530 aa		32.4	■■■□□ 2.78
SMARCD2-210	ENST00000584400	SMIM22	K7EJ46	135 aa		32.39	■■■□□ 2.78
SMARCD2-210	ENST00000584400	CAP1	Q01518	475 aa		32.39	■■■□□ 2.78
SMARCD2-210	ENST00000584400	PDE4B	Q07343	736 aa		32.39	■■■□□ 2.78
SMARCD2-210	ENST00000584400	CCDC129	Q6ZRS4	1044 aa		32.39	■■■□□ 2.78
SMARCD2-210	ENST00000584400	ZNF444	Q8N0Y2	327 aa	Predicted RBP	32.39	■■■□□ 2.78
SMARCD2-210	ENST00000584400	BAZ2A	Q9UIF9	1905 aa	Known RBP	32.38	■■■□□ 2.77
SMARCD2-210	ENST00000584400	SDS	P20132	328 aa		32.38	■■■□□ 2.77
SMARCD2-210	ENST00000584400	TRIM47	Q96LD4	638 aa		32.38	■■■□□ 2.77
SMARCD2-210	ENST00000584400	FAM227B	Q96M60	508 aa		32.38	■■■□□ 2.77
SMARCD2-210	ENST00000584400	VCAM1	P19320	739 aa		32.37	■■■□□ 2.77
SMARCD2-210	ENST00000584400	HERVK_113	P62684	666 aa		32.37	■■■□□ 2.77
SMARCD2-210	ENST00000584400	NBPF11	Q86T75	865 aa		32.37	■■■□□ 2.77
SMARCD2-210	ENST00000584400	LPAR1	Q92633	364 aa		32.37	■■■□□ 2.77
SMARCD2-210	ENST00000584400	P2RX7	Q99572	595 aa	Known RBP	32.37	■■■□□ 2.77
SMARCD2-210	ENST00000584400	SRRD	Q9UH36	339 aa		32.37	■■■□□ 2.77
SMARCD2-210	ENST00000584400		A0A0D9SFI3	127 aa		32.36	■■■□□ 2.77
SMARCD2-210	ENST00000584400	PPARA	Q07869	468 aa		32.36	■■■□□ 2.77
SMARCD2-210	ENST00000584400	NMI	Q13287	307 aa	Predicted RBP	32.36	■■■□□ 2.77
SMARCD2-210	ENST00000584400	STK11IP	Q8N1F8	1099 aa		32.36	■■■□□ 2.77
SMARCD2-210	ENST00000584400	DIAPH3	Q9NSV4	1193 aa		32.36	■■■□□ 2.77
SMARCD2-210	ENST00000584400	TMX2	Q9Y320	296 aa		32.36	■■■□□ 2.77
SMARCD2-210	ENST00000584400		A0A1W2PRG0	241 aa		32.35	■■■□□ 2.77
SMARCD2-210	ENST00000584400	ECM2	O94769	699 aa	Predicted RBP	32.35	■■■□□ 2.77
SMARCD2-210	ENST00000584400	RASA1	P20936	1047 aa		32.35	■■■□□ 2.77
SMARCD2-210	ENST00000584400	TNPO2	O14787	897 aa	Known RBP	32.34	■■■□□ 2.77
SMARCD2-210	ENST00000584400	PDE4A	P27815	886 aa		32.34	■■■□□ 2.77
SMARCD2-210	ENST00000584400	ALX1	Q15699	326 aa		32.34	■■■□□ 2.77
SMARCD2-210	ENST00000584400	CATSPERG	Q6ZRH7	1159 aa		32.34	■■■□□ 2.77
SMARCD2-210	ENST00000584400	MORF4L1	Q9UBU8	362 aa		32.34	■■■□□ 2.77
SMARCD2-210	ENST00000584400	PTCH2	Q9Y6C5	1203 aa		32.34	■■■□□ 2.77
SMARCD2-210	ENST00000584400	CCDC171	Q6TFL3	1326 aa		32.33	■■■□□ 2.77
SMARCD2-210	ENST00000584400	MYPN	Q86TC9	1320 aa		32.33	■■■□□ 2.77
SMARCD2-210	ENST00000584400	CTGF	P29279	349 aa		32.33	■■■□□ 2.77
SMARCD2-210	ENST00000584400	SLC9C1	Q4G0N8	1177 aa		32.33	■■■□□ 2.77
SMARCD2-210	ENST00000584400	GPRC5A	Q8NFJ5	357 aa		32.33	■■■□□ 2.77
SMARCD2-210	ENST00000584400	COA7	Q96BR5	231 aa		32.33	■■■□□ 2.77
SMARCD2-210	ENST00000584400	RPAP3	Q9H6T3	665 aa	Predicted RBP	32.33	■■■□□ 2.77
SMARCD2-210	ENST00000584400	EEF2	P13639	858 aa	Known RBP	32.32	■■■□□ 2.76
SMARCD2-210	ENST00000584400	ATP2B2	Q01814	1243 aa		32.32	■■■□□ 2.76
SMARCD2-210	ENST00000584400	RAET1E	Q8TD07	263 aa		32.32	■■■□□ 2.76
SMARCD2-210	ENST00000584400	ARMC5	Q96C12	935 aa		32.32	■■■□□ 2.76
SMARCD2-210	ENST00000584400	VCPKMT	Q9H867	229 aa		32.32	■■■□□ 2.76
SMARCD2-210	ENST00000584400	TTC22	Q5TAA0	569 aa		32.31	■■■□□ 2.76
SMARCD2-210	ENST00000584400	VPS53	Q5VIR6	699 aa		32.31	■■■□□ 2.76
SMARCD2-210	ENST00000584400	SIAH1	Q8IUQ4	282 aa		32.31	■■■□□ 2.76
SMARCD2-210	ENST00000584400	GOPC	Q9HD26	462 aa		32.31	■■■□□ 2.76
SMARCD2-210	ENST00000584400	FOXP2	O15409	715 aa		32.29	■■■□□ 2.76
SMARCD2-210	ENST00000584400	PRDM1	O75626	825 aa		32.29	■■■□□ 2.76
SMARCD2-210	ENST00000584400	TSPY3	P0CV98	308 aa		32.29	■■■□□ 2.76
SMARCD2-210	ENST00000584400	TSPY8	P0CW00	308 aa		32.29	■■■□□ 2.76
SMARCD2-210	ENST00000584400	HSPD1	P10809	573 aa	Known RBP	32.29	■■■□□ 2.76
SMARCD2-210	ENST00000584400	CWC27	Q6UX04	472 aa	Known RBP	32.29	■■■□□ 2.76
SMARCD2-210	ENST00000584400	CLEC10A	Q8IUN9	316 aa		32.29	■■■□□ 2.76
SMARCD2-210	ENST00000584400	CCAR1	Q8IX12	1150 aa	Known RBP	32.29	■■■□□ 2.76
SMARCD2-210	ENST00000584400	HOXC10	Q9NYD6	342 aa		32.29	■■■□□ 2.76
SMARCD2-210	ENST00000584400	ANAPC4	Q9UJX5	808 aa		32.29	■■■□□ 2.76
SMARCD2-210	ENST00000584400	ZMYM6	O95789	1325 aa		32.28	■■■□□ 2.76
SMARCD2-210	ENST00000584400	COG2	Q14746	738 aa		32.28	■■■□□ 2.76
SMARCD2-210	ENST00000584400	PPP4R3B	Q5MIZ7	849 aa		32.28	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms