RNA–Protein interactions for RNA: ENST00000584313.5

CLTC-213, Transcript of clathrin heavy chain, humanhuman

TSL 3

Gene CLTC, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-213ENST00000584313 GCLCP48506 637 aaPredicted RBP17.21■□□□□ 0.35
CLTC-213ENST00000584313 RGS19P49795 217 aa17.21■□□□□ 0.35
CLTC-213ENST00000584313 PRMT2P55345 433 aa17.21■□□□□ 0.35
CLTC-213ENST00000584313 FCGRTP55899 365 aa17.21■□□□□ 0.35
CLTC-213ENST00000584313 IRX3P78415 501 aaPredicted RBP17.21■□□□□ 0.35
CLTC-213ENST00000584313 ZYXQ15942 572 aaKnown RBP17.21■□□□□ 0.35
CLTC-213ENST00000584313 SBK1Q52WX2 424 aa17.21■□□□□ 0.35
CLTC-213ENST00000584313 TMEM179Q6ZVK1 233 aa17.21■□□□□ 0.35
CLTC-213ENST00000584313 ARMC5Q96C12 935 aa17.21■□□□□ 0.35
CLTC-213ENST00000584313 C12orf42Q96LP6 360 aa17.21■□□□□ 0.35
CLTC-213ENST00000584313 EPB41L4AQ9HCS5 686 aaPredicted RBP17.21■□□□□ 0.35
CLTC-213ENST00000584313 PTPRFP10586 1907 aa17.21■□□□□ 0.35
CLTC-213ENST00000584313 PATL2C9JE40 543 aaKnown RBP17.2■□□□□ 0.34
CLTC-213ENST00000584313 AKR1B1P15121 316 aa17.2■□□□□ 0.34
CLTC-213ENST00000584313 HOXD10P28358 340 aa17.2■□□□□ 0.34
CLTC-213ENST00000584313 USP14P54578 494 aa17.2■□□□□ 0.34
CLTC-213ENST00000584313 FAM110CQ1W6H9 321 aa17.2■□□□□ 0.34
CLTC-213ENST00000584313 CCDC17Q96LX7 622 aa17.2■□□□□ 0.34
CLTC-213ENST00000584313 P2RX7Q99572 595 aaKnown RBP17.2■□□□□ 0.34
CLTC-213ENST00000584313 SRRDQ9UH36 339 aa17.2■□□□□ 0.34
CLTC-213ENST00000584313 LOC285556D6RIA3 1793 aa17.2■□□□□ 0.34
CLTC-213ENST00000584313 MYH7P12883 1935 aa17.19■□□□□ 0.34
CLTC-213ENST00000584313 MINDY4BA8MYZ0 360 aa17.19■□□□□ 0.34
CLTC-213ENST00000584313 TDO2P48775 406 aa17.19■□□□□ 0.34
CLTC-213ENST00000584313 SLC9C1Q4G0N8 1177 aa17.19■□□□□ 0.34
CLTC-213ENST00000584313 PLEKHM2Q8IWE5 1019 aa17.19■□□□□ 0.34
CLTC-213ENST00000584313 A0A1W2PRG0 241 aa17.18■□□□□ 0.34
CLTC-213ENST00000584313 VCAM1P19320 739 aa17.18■□□□□ 0.34
CLTC-213ENST00000584313 HERVK_113P62684 666 aa17.18■□□□□ 0.34
CLTC-213ENST00000584313 TICAM2Q86XR7 235 aa17.18■□□□□ 0.34
CLTC-213ENST00000584313 IFNL3Q8IZI9 196 aa17.18■□□□□ 0.34
CLTC-213ENST00000584313 NACAP1Q9BZK3 213 aa17.18■□□□□ 0.34
CLTC-213ENST00000584313 OSBPL3Q9H4L5 887 aa17.18■□□□□ 0.34
CLTC-213ENST00000584313 MYPNQ86TC9 1320 aa17.18■□□□□ 0.34
CLTC-213ENST00000584313 USP17L15C9J2P7 530 aa17.17■□□□□ 0.34
CLTC-213ENST00000584313 USP17L13C9JLJ4 530 aa17.17■□□□□ 0.34
CLTC-213ENST00000584313 USP17L11C9JVI0 530 aa17.17■□□□□ 0.34
CLTC-213ENST00000584313 USP17L18D6R9N7 530 aa17.17■□□□□ 0.34
CLTC-213ENST00000584313 USP17L22D6RA61 530 aa17.17■□□□□ 0.34
CLTC-213ENST00000584313 USP17L17D6RBQ6 530 aa17.17■□□□□ 0.34
CLTC-213ENST00000584313 USP17L19D6RCP7 530 aa17.17■□□□□ 0.34
CLTC-213ENST00000584313 USP17L20D6RJB6 530 aa17.17■□□□□ 0.34
CLTC-213ENST00000584313 ICA1Q05084 483 aa17.17■□□□□ 0.34
CLTC-213ENST00000584313 PRKCZQ05513 592 aa17.17■□□□□ 0.34
CLTC-213ENST00000584313 USP17L24Q0WX57 530 aa17.17■□□□□ 0.34
CLTC-213ENST00000584313 CCDC129Q6ZRS4 1044 aa17.17■□□□□ 0.34
CLTC-213ENST00000584313 NBPF11Q86T75 865 aa17.17■□□□□ 0.34
CLTC-213ENST00000584313 CLEC10AQ8IUN9 316 aa17.17■□□□□ 0.34
CLTC-213ENST00000584313 SIAH1Q8IUQ4 282 aa17.17■□□□□ 0.34
CLTC-213ENST00000584313 MORF4L1Q9UBU8 362 aa17.17■□□□□ 0.34
CLTC-213ENST00000584313 ROBO3Q96MS0 1386 aa17.16■□□□□ 0.34
CLTC-213ENST00000584313 TRIM6-TRIM34B2RNG4 842 aa17.16■□□□□ 0.34
CLTC-213ENST00000584313 TNPO2O14787 897 aaKnown RBP17.16■□□□□ 0.34
CLTC-213ENST00000584313 STK11IPQ8N1F8 1099 aa17.16■□□□□ 0.34
CLTC-213ENST00000584313 RAET1EQ8TD07 263 aa17.16■□□□□ 0.34
CLTC-213ENST00000584313 SH3TC2Q8TF17 1288 aa17.16■□□□□ 0.34
CLTC-213ENST00000584313 ZNF333Q96JL9 665 aa17.16■□□□□ 0.34
CLTC-213ENST00000584313 MKNK2Q9HBH9 465 aa17.16■□□□□ 0.34
CLTC-213ENST00000584313 ARHGEF10LQ9HCE6 1279 aa17.16■□□□□ 0.34
CLTC-213ENST00000584313 HELLSQ9NRZ9 838 aa17.16■□□□□ 0.34
CLTC-213ENST00000584313 ZSWIM8A7E2V4 1837 aa17.15■□□□□ 0.34
CLTC-213ENST00000584313 PEX10O60683 326 aa17.15■□□□□ 0.34
CLTC-213ENST00000584313 RASA1P20936 1047 aa17.15■□□□□ 0.34
CLTC-213ENST00000584313 MLLT1Q03111 559 aaPredicted RBP17.15■□□□□ 0.34
CLTC-213ENST00000584313 CATSPERGQ6ZRH7 1159 aa17.15■□□□□ 0.34
CLTC-213ENST00000584313 GPRC5AQ8NFJ5 357 aa17.15■□□□□ 0.34
CLTC-213ENST00000584313 GTF3C2Q8WUA4 911 aaPredicted RBP17.15■□□□□ 0.34
CLTC-213ENST00000584313 RILPL2Q969X0 211 aa17.15■□□□□ 0.34
CLTC-213ENST00000584313 FAM227BQ96M60 508 aa17.15■□□□□ 0.34
CLTC-213ENST00000584313 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.15■□□□□ 0.34
CLTC-213ENST00000584313 NAPBQ9H115 298 aa17.15■□□□□ 0.34
CLTC-213ENST00000584313 RPAP3Q9H6T3 665 aaPredicted RBP17.15■□□□□ 0.34
CLTC-213ENST00000584313 SH2D4AQ9H788 454 aa17.15■□□□□ 0.34
CLTC-213ENST00000584313 KANSL2Q9H9L4 492 aa17.15■□□□□ 0.34
CLTC-213ENST00000584313 TXNRD2Q9NNW7 524 aa17.15■□□□□ 0.34
CLTC-213ENST00000584313 RBPJLQ9UBG7 517 aa17.15■□□□□ 0.34
CLTC-213ENST00000584313 GABRQQ9UN88 632 aa17.15■□□□□ 0.34
CLTC-213ENST00000584313 BAZ2AQ9UIF9 1905 aaKnown RBP17.15■□□□□ 0.34
CLTC-213ENST00000584313 A0A0D9SFI3 127 aa17.14■□□□□ 0.33
CLTC-213ENST00000584313 FOXP2O15409 715 aa17.14■□□□□ 0.33
CLTC-213ENST00000584313 FLT3LGP49771 235 aa17.14■□□□□ 0.33
CLTC-213ENST00000584313 POTEEQ6S8J3 1075 aa17.14■□□□□ 0.33
CLTC-213ENST00000584313 COA7Q96BR5 231 aa17.14■□□□□ 0.33
CLTC-213ENST00000584313 ZNF287Q9HBT7 754 aa17.14■□□□□ 0.33
CLTC-213ENST00000584313 TMX2Q9Y320 296 aa17.14■□□□□ 0.33
CLTC-213ENST00000584313 BRCA2P51587 3418 aa17.14■□□□□ 0.33
CLTC-213ENST00000584313 PRDM1O75626 825 aa17.13■□□□□ 0.33
CLTC-213ENST00000584313 EEF2P13639 858 aaKnown RBP17.13■□□□□ 0.33
CLTC-213ENST00000584313 GRK4P32298 578 aa17.13■□□□□ 0.33
CLTC-213ENST00000584313 ATP2B2Q01814 1243 aa17.13■□□□□ 0.33
CLTC-213ENST00000584313 NMIQ13287 307 aaPredicted RBP17.13■□□□□ 0.33
CLTC-213ENST00000584313 MCMDC2Q4G0Z9 681 aa17.13■□□□□ 0.33
CLTC-213ENST00000584313 KIAA1755Q5JYT7 1200 aa17.13■□□□□ 0.33
CLTC-213ENST00000584313 VPS53Q5VIR6 699 aa17.13■□□□□ 0.33
CLTC-213ENST00000584313 LPAR1Q92633 364 aa17.13■□□□□ 0.33
CLTC-213ENST00000584313 PAGR1Q9BTK6 254 aa17.13■□□□□ 0.33
CLTC-213ENST00000584313 TNRC18O15417 2968 aaPredicted RBP17.13■□□□□ 0.33
CLTC-213ENST00000584313 MYCP01106 439 aaPredicted RBP17.12■□□□□ 0.33
CLTC-213ENST00000584313 SLC3A2P08195 630 aaKnown RBP17.12■□□□□ 0.33
CLTC-213ENST00000584313 ERVK-9P63128 1117 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms